EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000017518 (Gene tree)
Gene ID: -
Gene Symbol: XRCC6
Alias: D22S671|D22S731|G22P1|KU70|ML8
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 26573 bases
Position: chrPPEB01000956.1:172187-198759
Accession: 4055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000023956	SAP	PF02037.27	1.7e-10	1	1
ENSGAGP00000023958	SAP	PF02037.27	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000027280	XRCC6-201	2268	-	ENSGAGP00000023956	610 (aa)	-	-
ENSGAGT00000027282	XRCC6-202	2181	-	ENSGAGP00000023958	610 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017518	XRCC6	99	74.056	ENSG00000196419	XRCC6	99	73.892	Homo_sapiens
ENSGAGG00000017518	XRCC6	99	58.484	ENSAPOG00000012704	xrcc6	99	58.320	Acanthochromis_polyacanthus
ENSGAGG00000017518	XRCC6	99	59.143	ENSACIG00000021277	xrcc6	99	59.473	Amphilophus_citrinellus
ENSGAGG00000017518	XRCC6	99	58.388	ENSAOCG00000021344	xrcc6	99	58.388	Amphiprion_ocellaris
ENSGAGG00000017518	XRCC6	99	58.882	ENSAPEG00000020712	xrcc6	99	58.882	Amphiprion_percula
ENSGAGG00000017518	XRCC6	99	57.353	ENSATEG00000007119	xrcc6	99	57.680	Anabas_testudineus
ENSGAGG00000017518	XRCC6	90	81.752	ENSAPLG00000004469	XRCC6	99	81.752	Anas_platyrhynchos
ENSGAGG00000017518	XRCC6	99	65.733	ENSANAG00000020017	-	99	65.733	Aotus_nancymaae
ENSGAGG00000017518	XRCC6	99	73.892	ENSANAG00000018684	XRCC6	98	74.679	Aotus_nancymaae
ENSGAGG00000017518	XRCC6	99	65.132	ENSANAG00000035230	-	99	64.803	Aotus_nancymaae
ENSGAGG00000017518	XRCC6	99	62.562	ENSANAG00000023445	-	99	62.233	Aotus_nancymaae
ENSGAGG00000017518	XRCC6	99	58.320	ENSACLG00000018608	xrcc6	99	58.649	Astatotilapia_calliptera
ENSGAGG00000017518	XRCC6	99	61.438	ENSAMXG00000007545	xrcc6	100	61.438	Astyanax_mexicanus
ENSGAGG00000017518	XRCC6	99	74.056	ENSCJAG00000045512	XRCC6	99	73.727	Callithrix_jacchus
ENSGAGG00000017518	XRCC6	99	73.443	ENSTSYG00000011348	XRCC6	99	73.443	Carlito_syrichta
ENSGAGG00000017518	XRCC6	99	61.349	ENSCCAG00000037663	-	97	61.349	Cebus_capucinus
ENSGAGG00000017518	XRCC6	95	69.167	ENSCCAG00000030468	-	99	68.619	Cebus_capucinus
ENSGAGG00000017518	XRCC6	99	57.964	ENSCCAG00000035711	-	99	57.635	Cebus_capucinus
ENSGAGG00000017518	XRCC6	100	69.722	ENSCCAG00000030041	-	95	69.558	Cebus_capucinus
ENSGAGG00000017518	XRCC6	99	74.013	ENSCATG00000042366	XRCC6	98	74.871	Cercocebus_atys
ENSGAGG00000017518	XRCC6	99	74.262	ENSCLAG00000016669	XRCC6	99	74.262	Chinchilla_lanigera
ENSGAGG00000017518	XRCC6	99	74.013	ENSCSAG00000005784	XRCC6	99	73.849	Chlorocebus_sabaeus
ENSGAGG00000017518	XRCC6	100	97.213	ENSCPBG00000020535	XRCC6	100	97.213	Chrysemys_picta_bellii
ENSGAGG00000017518	XRCC6	99	35.948	ENSCING00000000633	-	96	36.333	Ciona_intestinalis
ENSGAGG00000017518	XRCC6	99	74.013	ENSCANG00000031032	XRCC6	99	73.849	Colobus_angolensis_palliatus
ENSGAGG00000017518	XRCC6	99	66.174	ENSCGRG00001019029	Xrcc6	99	66.174	Cricetulus_griseus_chok1gshd
ENSGAGG00000017518	XRCC6	99	72.578	ENSCGRG00000001528	Xrcc6	99	72.578	Cricetulus_griseus_crigri
ENSGAGG00000017518	XRCC6	99	57.026	ENSCSEG00000020434	xrcc6	99	57.026	Cynoglossus_semilaevis
ENSGAGG00000017518	XRCC6	99	60.591	ENSCVAG00000002189	xrcc6	99	60.591	Cyprinodon_variegatus
ENSGAGG00000017518	XRCC6	99	60.912	ENSDARG00000071551	xrcc6	100	60.749	Danio_rerio
ENSGAGG00000017518	XRCC6	78	73.846	ENSETEG00000015333	-	78	75.385	Echinops_telfairi
ENSGAGG00000017518	XRCC6	99	74.877	ENSEASG00005001514	XRCC6	99	74.877	Equus_asinus_asinus
ENSGAGG00000017518	XRCC6	99	74.220	ENSECAG00000017563	XRCC6	99	74.067	Equus_caballus
ENSGAGG00000017518	XRCC6	99	58.170	ENSELUG00000020301	xrcc6	99	58.170	Esox_lucius
ENSGAGG00000017518	XRCC6	99	78.140	ENSFALG00000011908	XRCC6	97	78.140	Ficedula_albicollis
ENSGAGG00000017518	XRCC6	99	59.770	ENSFHEG00000016833	xrcc6	99	59.770	Fundulus_heteroclitus
ENSGAGG00000017518	XRCC6	99	50.573	ENSGMOG00000013524	xrcc6	99	50.492	Gadus_morhua
ENSGAGG00000017518	XRCC6	99	77.488	ENSGALG00000011932	XRCC6	99	77.814	Gallus_gallus
ENSGAGG00000017518	XRCC6	99	58.621	ENSGAFG00000008130	xrcc6	99	58.456	Gambusia_affinis
ENSGAGG00000017518	XRCC6	99	57.143	ENSGACG00000004868	xrcc6	99	57.143	Gasterosteus_aculeatus
ENSGAGG00000017518	XRCC6	99	74.056	ENSGGOG00000015885	XRCC6	99	73.892	Gorilla_gorilla
ENSGAGG00000017518	XRCC6	91	59.180	ENSHBUG00000023281	xrcc6	99	59.180	Haplochromis_burtoni
ENSGAGG00000017518	XRCC6	99	73.607	ENSHGLG00000018078	XRCC6	99	73.279	Heterocephalus_glaber_female
ENSGAGG00000017518	XRCC6	99	73.607	ENSHGLG00100011264	XRCC6	99	73.279	Heterocephalus_glaber_male
ENSGAGG00000017518	XRCC6	99	55.810	ENSHCOG00000009821	xrcc6	99	55.974	Hippocampus_comes
ENSGAGG00000017518	XRCC6	99	60.848	ENSIPUG00000000767	xrcc6	96	61.395	Ictalurus_punctatus
ENSGAGG00000017518	XRCC6	99	75.369	ENSSTOG00000009490	XRCC6	99	75.369	Ictidomys_tridecemlineatus
ENSGAGG00000017518	XRCC6	99	67.488	ENSJJAG00000017136	Xrcc6	99	68.637	Jaculus_jaculus
ENSGAGG00000017518	XRCC6	99	60.033	ENSKMAG00000002141	xrcc6	99	59.868	Kryptolebias_marmoratus
ENSGAGG00000017518	XRCC6	99	58.333	ENSLBEG00000002691	xrcc6	99	58.333	Labrus_bergylta
ENSGAGG00000017518	XRCC6	84	56.731	ENSLOCG00000011533	xrcc6	99	56.731	Lepisosteus_oculatus
ENSGAGG00000017518	XRCC6	99	74.013	ENSMFAG00000003352	XRCC6	99	73.849	Macaca_fascicularis
ENSGAGG00000017518	XRCC6	99	74.013	ENSMMUG00000001856	XRCC6	99	73.849	Macaca_mulatta
ENSGAGG00000017518	XRCC6	99	74.013	ENSMNEG00000035076	XRCC6	99	73.849	Macaca_nemestrina
ENSGAGG00000017518	XRCC6	99	74.013	ENSMLEG00000019869	XRCC6	99	73.849	Mandrillus_leucophaeus
ENSGAGG00000017518	XRCC6	99	55.791	ENSMAMG00000003368	xrcc6	99	55.791	Mastacembelus_armatus
ENSGAGG00000017518	XRCC6	95	56.048	ENSMAMG00000003405	xrcc6	97	56.048	Mastacembelus_armatus
ENSGAGG00000017518	XRCC6	99	58.155	ENSMZEG00005028080	xrcc6	99	58.484	Maylandia_zebra
ENSGAGG00000017518	XRCC6	99	77.850	ENSMGAG00000012146	XRCC6	99	78.176	Meleagris_gallopavo
ENSGAGG00000017518	XRCC6	99	72.250	ENSMAUG00000017340	Xrcc6	100	72.250	Mesocricetus_auratus
ENSGAGG00000017518	XRCC6	99	72.414	ENSMOCG00000015717	Xrcc6	100	72.414	Microtus_ochrogaster
ENSGAGG00000017518	XRCC6	99	56.579	ENSMMOG00000003536	xrcc6	99	56.250	Mola_mola
ENSGAGG00000017518	XRCC6	99	57.825	ENSMALG00000013912	xrcc6	94	58.155	Monopterus_albus
ENSGAGG00000017518	XRCC6	99	67.816	MGP_CAROLIEiJ_G0020067	Xrcc6	99	67.816	Mus_caroli
ENSGAGG00000017518	XRCC6	99	72.414	ENSMUSG00000022471	Xrcc6	99	72.414	Mus_musculus
ENSGAGG00000017518	XRCC6	99	71.757	MGP_PahariEiJ_G0020069	Xrcc6	99	71.757	Mus_pahari
ENSGAGG00000017518	XRCC6	95	72.337	MGP_SPRETEiJ_G0020967	Xrcc6	99	72.337	Mus_spretus
ENSGAGG00000017518	XRCC6	99	71.148	ENSNGAG00000013750	Xrcc6	99	71.148	Nannospalax_galili
ENSGAGG00000017518	XRCC6	99	58.649	ENSNBRG00000004125	xrcc6	99	58.979	Neolamprologus_brichardi
ENSGAGG00000017518	XRCC6	95	73.448	ENSOPRG00000002386	XRCC6	99	73.448	Ochotona_princeps
ENSGAGG00000017518	XRCC6	99	72.085	ENSODEG00000015847	XRCC6	99	72.085	Octodon_degus
ENSGAGG00000017518	XRCC6	99	59.143	ENSONIG00000019715	xrcc6	99	59.143	Oreochromis_niloticus
ENSGAGG00000017518	XRCC6	68	79.469	ENSOANG00000011328	XRCC6	99	79.469	Ornithorhynchus_anatinus
ENSGAGG00000017518	XRCC6	99	73.641	ENSOCUG00000006948	XRCC6	99	73.641	Oryctolagus_cuniculus
ENSGAGG00000017518	XRCC6	99	59.113	ENSORLG00020007820	xrcc6	99	58.949	Oryzias_latipes_hni
ENSGAGG00000017518	XRCC6	99	59.442	ENSORLG00015006406	xrcc6	99	59.278	Oryzias_latipes_hsok
ENSGAGG00000017518	XRCC6	99	59.113	ENSOMEG00000008998	xrcc6	99	59.442	Oryzias_melastigma
ENSGAGG00000017518	XRCC6	99	75.246	ENSOGAG00000008821	XRCC6	100	75.246	Otolemur_garnettii
ENSGAGG00000017518	XRCC6	99	60.427	ENSPPAG00000037167	XRCC6	99	60.263	Pan_paniscus
ENSGAGG00000017518	XRCC6	99	74.056	ENSPTRG00000045824	XRCC6	99	74.914	Pan_troglodytes
ENSGAGG00000017518	XRCC6	99	74.056	ENSPTRG00000022548	XRCC6	99	74.914	Pan_troglodytes
ENSGAGG00000017518	XRCC6	99	73.849	ENSPANG00000001252	XRCC6	99	74.699	Papio_anubis
ENSGAGG00000017518	XRCC6	99	60.359	ENSPKIG00000003974	xrcc6	100	60.359	Paramormyrops_kingsleyae
ENSGAGG00000017518	XRCC6	99	56.623	ENSPMGG00000014220	xrcc6	100	56.788	Periophthalmus_magnuspinnatus
ENSGAGG00000017518	XRCC6	99	72.085	ENSPEMG00000023446	Xrcc6	99	72.085	Peromyscus_maniculatus_bairdii
ENSGAGG00000017518	XRCC6	99	73.355	ENSPCIG00000026409	XRCC6	99	73.355	Phascolarctos_cinereus
ENSGAGG00000017518	XRCC6	99	59.770	ENSPFOG00000017173	xrcc6	99	59.770	Poecilia_formosa
ENSGAGG00000017518	XRCC6	99	59.442	ENSPLAG00000000562	xrcc6	99	59.442	Poecilia_latipinna
ENSGAGG00000017518	XRCC6	99	59.770	ENSPMEG00000018478	xrcc6	99	59.770	Poecilia_mexicana
ENSGAGG00000017518	XRCC6	99	59.477	ENSPREG00000020957	xrcc6	93	59.477	Poecilia_reticulata
ENSGAGG00000017518	XRCC6	99	65.846	ENSPPYG00000011876	XRCC6	99	65.681	Pongo_abelii
ENSGAGG00000017518	XRCC6	99	73.563	ENSPVAG00000001168	XRCC6	99	73.235	Pteropus_vampyrus
ENSGAGG00000017518	XRCC6	99	58.320	ENSPNYG00000003815	xrcc6	99	55.799	Pundamilia_nyererei
ENSGAGG00000017518	XRCC6	99	71.593	ENSRNOG00000006392	Xrcc6	99	71.593	Rattus_norvegicus
ENSGAGG00000017518	XRCC6	99	68.750	ENSRBIG00000039794	XRCC6	99	68.793	Rhinopithecus_bieti
ENSGAGG00000017518	XRCC6	99	74.013	ENSRROG00000030297	XRCC6	99	73.849	Rhinopithecus_roxellana
ENSGAGG00000017518	XRCC6	67	64.619	ENSSBOG00000024724	-	99	64.619	Saimiri_boliviensis_boliviensis
ENSGAGG00000017518	XRCC6	99	71.967	ENSSHAG00000010790	XRCC6	99	71.967	Sarcophilus_harrisii
ENSGAGG00000017518	XRCC6	99	61.501	ENSSFOG00015014409	xrcc6	100	61.664	Scleropages_formosus
ENSGAGG00000017518	XRCC6	99	60.461	ENSSMAG00000006496	xrcc6	99	60.791	Scophthalmus_maximus
ENSGAGG00000017518	XRCC6	99	58.007	ENSSDUG00000007542	xrcc6	99	58.333	Seriola_dumerili
ENSGAGG00000017518	XRCC6	99	57.680	ENSSLDG00000009974	xrcc6	99	58.007	Seriola_lalandi_dorsalis
ENSGAGG00000017518	XRCC6	99	84.072	ENSSPUG00000012086	XRCC6	99	84.072	Sphenodon_punctatus
ENSGAGG00000017518	XRCC6	99	59.278	ENSSPAG00000015199	xrcc6	99	59.606	Stegastes_partitus
ENSGAGG00000017518	XRCC6	96	80.617	ENSTGUG00000009852	-	95	80.617	Taeniopygia_guttata
ENSGAGG00000017518	XRCC6	99	57.166	ENSTRUG00000017070	xrcc6	99	57.166	Takifugu_rubripes
ENSGAGG00000017518	XRCC6	95	58.262	ENSTNIG00000012947	xrcc6	99	58.262	Tetraodon_nigroviridis
ENSGAGG00000017518	XRCC6	95	69.019	ENSTBEG00000011736	XRCC6	99	69.019	Tupaia_belangeri
ENSGAGG00000017518	XRCC6	99	61.967	ENSTTRG00000006749	XRCC6	99	61.967	Tursiops_truncatus
ENSGAGG00000017518	XRCC6	99	58.949	ENSXMAG00000009691	xrcc6	99	58.949	Xiphophorus_maculatus