EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000017553 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 2600 bases
Position: chrPPEB01001751.1:297378-299977
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000023997	RVT_1	PF00078.27	3.1e-42	1	1
ENSGAGP00000023997	Exo_endo_phos	PF03372.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000027330	-	2600	-	ENSGAGP00000023997	720 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000017553	-	70	89.463	ENSGAGG00000020043	-	78	89.463
ENSGAGG00000017553	-	65	49.471	ENSGAGG00000022577	-	73	49.471
ENSGAGG00000017553	-	81	89.880	ENSGAGG00000009965	-	96	89.880
ENSGAGG00000017553	-	58	90.385	ENSGAGG00000025872	-	65	90.385
ENSGAGG00000017553	-	65	49.260	ENSGAGG00000021929	-	93	49.260
ENSGAGG00000017553	-	86	90.821	ENSGAGG00000019034	-	76	90.821
ENSGAGG00000017553	-	86	90.499	ENSGAGG00000001427	-	96	90.499
ENSGAGG00000017553	-	70	91.650	ENSGAGG00000009371	-	69	91.650
ENSGAGG00000017553	-	65	49.471	ENSGAGG00000025677	-	92	49.471
ENSGAGG00000017553	-	70	89.264	ENSGAGG00000009263	-	94	89.264
ENSGAGG00000017553	-	78	89.165	ENSGAGG00000005937	-	81	89.165
ENSGAGG00000017553	-	96	90.276	ENSGAGG00000013858	-	85	90.276

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017553	-	57	30.365	ENSACLG00000000579	-	64	30.365	Astatotilapia_calliptera
ENSGAGG00000017553	-	57	30.445	ENSACLG00000006988	-	62	30.445	Astatotilapia_calliptera
ENSGAGG00000017553	-	59	30.022	ENSACLG00000005509	-	98	30.549	Astatotilapia_calliptera
ENSGAGG00000017553	-	65	77.399	ENSCPBG00000022940	-	75	77.399	Chrysemys_picta_bellii
ENSGAGG00000017553	-	62	79.195	ENSCPBG00000002764	-	82	79.195	Chrysemys_picta_bellii
ENSGAGG00000017553	-	60	78.241	ENSCPBG00000013207	-	98	78.241	Chrysemys_picta_bellii
ENSGAGG00000017553	-	62	30.043	ENSLBEG00000009271	-	90	30.043	Labrus_bergylta
ENSGAGG00000017553	-	57	30.353	ENSORLG00000030053	-	58	30.353	Oryzias_latipes
ENSGAGG00000017553	-	52	31.332	ENSORLG00015020629	-	59	31.332	Oryzias_latipes_hsok
ENSGAGG00000017553	-	50	44.444	ENSPKIG00000019910	-	83	44.444	Paramormyrops_kingsleyae
ENSGAGG00000017553	-	57	46.043	ENSPSIG00000001709	-	95	46.043	Pelodiscus_sinensis
ENSGAGG00000017553	-	61	46.309	ENSPSIG00000000025	-	83	46.309	Pelodiscus_sinensis
ENSGAGG00000017553	-	55	47.643	ENSPSIG00000000402	-	88	47.643	Pelodiscus_sinensis