EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000017565 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 45624 bases
Position: chrPPEB01003981.1:14267-59890
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000024018	zf-RanBP	PF00641.18	1.6e-08	1	1
ENSGAGP00000024017	zf-RanBP	PF00641.18	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000027352	-	2891	-	ENSGAGP00000024017	524 (aa)	-	-
ENSGAGT00000027353	-	2668	-	ENSGAGP00000024018	497 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017565	-	80	67.136	ENSG00000135679	MDM2	100	79.348	Homo_sapiens
ENSGAGG00000017565	-	70	34.677	ENSG00000198625	MDM4	61	57.746	Homo_sapiens
ENSGAGG00000017565	-	70	34.807	ENSAMEG00000001126	MDM4	66	33.828	Ailuropoda_melanoleuca
ENSGAGG00000017565	-	85	64.350	ENSAMEG00000008526	MDM2	88	64.350	Ailuropoda_melanoleuca
ENSGAGG00000017565	-	80	77.251	ENSAPLG00000011164	MDM2	85	76.066	Anas_platyrhynchos
ENSGAGG00000017565	-	77	62.802	ENSACAG00000004204	MDM2	75	65.301	Anolis_carolinensis
ENSGAGG00000017565	-	69	34.384	ENSACAG00000007350	-	66	34.441	Anolis_carolinensis
ENSGAGG00000017565	-	63	65.600	ENSANAG00000027171	-	83	65.600	Aotus_nancymaae
ENSGAGG00000017565	-	70	35.457	ENSANAG00000036891	MDM4	67	34.821	Aotus_nancymaae
ENSGAGG00000017565	-	70	33.884	ENSBTAG00000006255	MDM4	67	33.929	Bos_taurus
ENSGAGG00000017565	-	80	65.808	ENSBTAG00000010422	MDM2	86	65.808	Bos_taurus
ENSGAGG00000017565	-	80	66.197	ENSCJAG00000042596	-	85	66.432	Callithrix_jacchus
ENSGAGG00000017565	-	80	65.962	ENSCJAG00000007464	-	75	66.197	Callithrix_jacchus
ENSGAGG00000017565	-	70	35.180	ENSCJAG00000016986	MDM4	67	34.524	Callithrix_jacchus
ENSGAGG00000017565	-	85	62.556	ENSCAFG00000000418	MDM2	87	62.556	Canis_familiaris
ENSGAGG00000017565	-	70	35.040	ENSCAFG00000009669	MDM4	66	34.104	Canis_familiaris
ENSGAGG00000017565	-	85	62.556	ENSCAFG00020017002	MDM2	90	62.556	Canis_lupus_dingo
ENSGAGG00000017565	-	70	34.521	ENSCHIG00000010343	-	67	34.320	Capra_hircus
ENSGAGG00000017565	-	80	65.258	ENSCHIG00000019939	-	86	65.023	Capra_hircus
ENSGAGG00000017565	-	70	33.784	ENSTSYG00000010731	MDM4	67	33.333	Carlito_syrichta
ENSGAGG00000017565	-	73	54.663	ENSTSYG00000031248	-	81	55.556	Carlito_syrichta
ENSGAGG00000017565	-	68	33.521	ENSCAPG00000011380	MDM4	67	33.531	Cavia_aperea
ENSGAGG00000017565	-	80	63.765	ENSCPOG00000004323	MDM2	86	63.765	Cavia_porcellus
ENSGAGG00000017565	-	70	34.140	ENSCPOG00000008227	MDM4	73	35.422	Cavia_porcellus
ENSGAGG00000017565	-	66	30.259	ENSCCAG00000035274	-	72	30.814	Cebus_capucinus
ENSGAGG00000017565	-	80	66.589	ENSCCAG00000006745	-	86	66.589	Cebus_capucinus
ENSGAGG00000017565	-	70	35.734	ENSCCAG00000031000	MDM4	67	35.119	Cebus_capucinus
ENSGAGG00000017565	-	70	34.140	ENSCATG00000027086	MDM4	67	34.694	Cercocebus_atys
ENSGAGG00000017565	-	80	66.901	ENSCATG00000045264	-	81	71.154	Cercocebus_atys
ENSGAGG00000017565	-	80	64.554	ENSCLAG00000009877	MDM2	84	64.554	Chinchilla_lanigera
ENSGAGG00000017565	-	67	33.791	ENSCLAG00000011995	MDM4	67	32.670	Chinchilla_lanigera
ENSGAGG00000017565	-	70	34.409	ENSCSAG00000014561	MDM4	67	34.226	Chlorocebus_sabaeus
ENSGAGG00000017565	-	80	66.667	ENSCSAG00000004244	MDM2	86	66.901	Chlorocebus_sabaeus
ENSGAGG00000017565	-	78	96.088	ENSCPBG00000013316	MDM2	86	95.952	Chrysemys_picta_bellii
ENSGAGG00000017565	-	80	66.667	ENSCANG00000034475	MDM2	79	76.042	Colobus_angolensis_palliatus
ENSGAGG00000017565	-	80	61.176	ENSCGRG00001022261	Mdm2	86	61.176	Cricetulus_griseus_chok1gshd
ENSGAGG00000017565	-	67	34.262	ENSCGRG00001004339	Mdm4	67	33.526	Cricetulus_griseus_chok1gshd
ENSGAGG00000017565	-	80	61.176	ENSCGRG00000017891	Mdm2	86	61.176	Cricetulus_griseus_crigri
ENSGAGG00000017565	-	67	34.262	ENSCGRG00000008463	Mdm4	67	33.526	Cricetulus_griseus_crigri
ENSGAGG00000017565	-	80	65.023	ENSDNOG00000046929	-	83	65.023	Dasypus_novemcinctus
ENSGAGG00000017565	-	67	36.212	ENSDNOG00000000842	MDM4	67	35.260	Dasypus_novemcinctus
ENSGAGG00000017565	-	67	33.241	ENSDORG00000006873	Mdm4	67	32.277	Dipodomys_ordii
ENSGAGG00000017565	-	80	51.522	ENSDORG00000007222	Mdm2	76	65.455	Dipodomys_ordii
ENSGAGG00000017565	-	69	31.967	ENSETEG00000011245	MDM4	67	30.904	Echinops_telfairi
ENSGAGG00000017565	-	80	52.804	ENSETEG00000011183	MDM2	73	67.879	Echinops_telfairi
ENSGAGG00000017565	-	80	60.520	ENSEASG00005008055	-	86	59.953	Equus_asinus_asinus
ENSGAGG00000017565	-	70	35.912	ENSEASG00005011431	MDM4	67	34.808	Equus_asinus_asinus
ENSGAGG00000017565	-	80	60.656	ENSECAG00000013604	MDM2	86	60.094	Equus_caballus
ENSGAGG00000017565	-	70	35.912	ENSECAG00000004843	MDM4	67	34.808	Equus_caballus
ENSGAGG00000017565	-	80	58.294	ENSEEUG00000013849	MDM2	86	59.716	Erinaceus_europaeus
ENSGAGG00000017565	-	64	35.311	ENSELUG00000011889	mdm4	66	36.888	Esox_lucius
ENSGAGG00000017565	-	69	35.246	ENSFCAG00000014851	MDM4	67	34.593	Felis_catus
ENSGAGG00000017565	-	80	65.962	ENSFCAG00000024456	MDM2	86	65.962	Felis_catus
ENSGAGG00000017565	-	78	63.706	ENSFDAG00000007913	-	86	63.134	Fukomys_damarensis
ENSGAGG00000017565	-	70	33.602	ENSFDAG00000021356	MDM4	66	33.631	Fukomys_damarensis
ENSGAGG00000017565	-	72	31.980	ENSGMOG00000016389	mdm4	69	33.238	Gadus_morhua
ENSGAGG00000017565	-	78	76.716	ENSGALG00000009942	MDM2	86	76.247	Gallus_gallus
ENSGAGG00000017565	-	70	34.711	ENSGGOG00000012957	MDM4	67	34.524	Gorilla_gorilla
ENSGAGG00000017565	-	80	66.667	ENSGGOG00000012907	MDM2	85	66.901	Gorilla_gorilla
ENSGAGG00000017565	-	78	64.251	ENSHGLG00000000856	-	86	64.169	Heterocephalus_glaber_female
ENSGAGG00000017565	-	78	61.650	ENSHGLG00000020526	-	84	61.176	Heterocephalus_glaber_female
ENSGAGG00000017565	-	70	33.600	ENSHGLG00000007642	MDM4	67	33.333	Heterocephalus_glaber_female
ENSGAGG00000017565	-	78	59.951	ENSHGLG00000016066	-	89	57.906	Heterocephalus_glaber_female
ENSGAGG00000017565	-	70	33.600	ENSHGLG00100006704	-	67	33.333	Heterocephalus_glaber_male
ENSGAGG00000017565	-	78	64.251	ENSHGLG00100000441	-	99	64.169	Heterocephalus_glaber_male
ENSGAGG00000017565	-	67	34.435	ENSHCOG00000008924	mdm4	67	33.903	Hippocampus_comes
ENSGAGG00000017565	-	67	32.337	ENSIPUG00000024447	mdm4	70	32.861	Ictalurus_punctatus
ENSGAGG00000017565	-	69	33.333	ENSSTOG00000004184	MDM4	70	32.591	Ictidomys_tridecemlineatus
ENSGAGG00000017565	-	80	65.882	ENSSTOG00000014702	-	86	66.118	Ictidomys_tridecemlineatus
ENSGAGG00000017565	-	67	32.768	ENSJJAG00000017144	Mdm4	67	32.849	Jaculus_jaculus
ENSGAGG00000017565	-	79	59.045	ENSLACG00000010207	MDM2	85	58.950	Latimeria_chalumnae
ENSGAGG00000017565	-	85	61.504	ENSLAFG00000005885	MDM2	90	61.504	Loxodonta_africana
ENSGAGG00000017565	-	69	33.799	ENSLAFG00000002169	MDM4	67	32.845	Loxodonta_africana
ENSGAGG00000017565	-	80	66.901	ENSMFAG00000042359	MDM2	86	67.136	Macaca_fascicularis
ENSGAGG00000017565	-	70	30.854	ENSMFAG00000033606	MDM4	68	33.234	Macaca_fascicularis
ENSGAGG00000017565	-	80	66.901	ENSMMUG00000014193	MDM2	85	67.136	Macaca_mulatta
ENSGAGG00000017565	-	70	30.914	ENSMMUG00000011236	MDM4	68	33.234	Macaca_mulatta
ENSGAGG00000017565	-	80	66.901	ENSMNEG00000041135	MDM2	81	71.154	Macaca_nemestrina
ENSGAGG00000017565	-	63	32.941	ENSMNEG00000026547	MDM4	72	34.226	Macaca_nemestrina
ENSGAGG00000017565	-	70	34.140	ENSMLEG00000032041	MDM4	67	34.694	Mandrillus_leucophaeus
ENSGAGG00000017565	-	80	66.901	ENSMLEG00000042099	MDM2	81	71.154	Mandrillus_leucophaeus
ENSGAGG00000017565	-	73	74.413	ENSMGAG00000010513	MDM2	96	75.427	Meleagris_gallopavo
ENSGAGG00000017565	-	80	60.563	ENSMICG00000029037	-	85	60.329	Microcebus_murinus
ENSGAGG00000017565	-	67	34.066	ENSMICG00000017021	MDM4	67	33.828	Microcebus_murinus
ENSGAGG00000017565	-	77	59.115	ENSMICG00000046928	-	82	59.375	Microcebus_murinus
ENSGAGG00000017565	-	69	34.986	ENSMOCG00000002099	Mdm4	67	33.824	Microtus_ochrogaster
ENSGAGG00000017565	-	80	62.118	ENSMOCG00000008043	Mdm2	86	62.500	Microtus_ochrogaster
ENSGAGG00000017565	-	80	71.294	ENSMODG00000007219	-	86	70.519	Monodelphis_domestica
ENSGAGG00000017565	-	70	35.325	ENSMODG00000001605	MDM4	75	34.080	Monodelphis_domestica
ENSGAGG00000017565	-	67	35.574	ENSMALG00000020663	mdm4	68	35.362	Monopterus_albus
ENSGAGG00000017565	-	69	33.604	MGP_CAROLIEiJ_G0014593	Mdm4	67	32.857	Mus_caroli
ENSGAGG00000017565	-	80	57.339	MGP_CAROLIEiJ_G0015836	Mdm2	86	57.569	Mus_caroli
ENSGAGG00000017565	-	80	60.789	ENSMUSG00000020184	Mdm2	86	60.789	Mus_musculus
ENSGAGG00000017565	-	69	33.875	ENSMUSG00000054387	Mdm4	67	33.143	Mus_musculus
ENSGAGG00000017565	-	80	60.412	MGP_PahariEiJ_G0031251	Mdm2	86	60.641	Mus_pahari
ENSGAGG00000017565	-	69	34.530	MGP_PahariEiJ_G0027829	Mdm4	67	34.412	Mus_pahari
ENSGAGG00000017565	-	69	34.160	MGP_SPRETEiJ_G0015400	Mdm4	67	32.857	Mus_spretus
ENSGAGG00000017565	-	80	60.373	MGP_SPRETEiJ_G0016659	Mdm2	87	62.059	Mus_spretus
ENSGAGG00000017565	-	70	35.150	ENSMPUG00000011721	MDM4	67	34.211	Mustela_putorius_furo
ENSGAGG00000017565	-	85	63.453	ENSMPUG00000017505	MDM2	90	63.453	Mustela_putorius_furo
ENSGAGG00000017565	-	80	62.704	ENSMLUG00000009997	MDM2	85	63.170	Myotis_lucifugus
ENSGAGG00000017565	-	69	32.329	ENSMLUG00000007129	MDM4	66	32.471	Myotis_lucifugus
ENSGAGG00000017565	-	80	63.380	ENSNGAG00000012154	Mdm2	86	63.529	Nannospalax_galili
ENSGAGG00000017565	-	69	33.973	ENSNGAG00000012344	Mdm4	67	33.526	Nannospalax_galili
ENSGAGG00000017565	-	70	34.711	ENSNLEG00000014271	MDM4	67	34.524	Nomascus_leucogenys
ENSGAGG00000017565	-	80	66.901	ENSNLEG00000003757	MDM2	85	67.136	Nomascus_leucogenys
ENSGAGG00000017565	-	67	33.143	ENSMEUG00000012624	-	66	32.344	Notamacropus_eugenii
ENSGAGG00000017565	-	78	60.000	ENSOPRG00000009677	MDM2	85	59.529	Ochotona_princeps
ENSGAGG00000017565	-	67	33.518	ENSOPRG00000013878	MDM4	70	33.333	Ochotona_princeps
ENSGAGG00000017565	-	80	53.444	ENSODEG00000006648	-	84	52.857	Octodon_degus
ENSGAGG00000017565	-	67	33.520	ENSODEG00000013499	MDM4	67	33.432	Octodon_degus
ENSGAGG00000017565	-	73	56.883	ENSODEG00000000416	-	79	60.284	Octodon_degus
ENSGAGG00000017565	-	80	61.882	ENSODEG00000004028	-	86	60.849	Octodon_degus
ENSGAGG00000017565	-	71	72.386	ENSOANG00000005942	MDM2	84	72.386	Ornithorhynchus_anatinus
ENSGAGG00000017565	-	67	36.158	ENSOANG00000013464	MDM4	70	35.000	Ornithorhynchus_anatinus
ENSGAGG00000017565	-	78	59.847	ENSOCUG00000011354	-	84	60.147	Oryctolagus_cuniculus
ENSGAGG00000017565	-	67	33.520	ENSOCUG00000000005	MDM4	67	33.043	Oryctolagus_cuniculus
ENSGAGG00000017565	-	80	64.085	ENSOCUG00000010899	-	55	64.554	Oryctolagus_cuniculus
ENSGAGG00000017565	-	80	59.535	ENSOGAG00000034779	MDM2	86	60.233	Otolemur_garnettii
ENSGAGG00000017565	-	82	57.767	ENSOGAG00000011845	-	86	59.906	Otolemur_garnettii
ENSGAGG00000017565	-	67	33.807	ENSOGAG00000011679	MDM4	67	33.533	Otolemur_garnettii
ENSGAGG00000017565	-	80	65.187	ENSOARG00000000570	-	85	64.486	Ovis_aries
ENSGAGG00000017565	-	70	34.225	ENSOARG00000002783	-	67	34.024	Ovis_aries
ENSGAGG00000017565	-	80	64.789	ENSOARG00000013821	-	86	64.554	Ovis_aries
ENSGAGG00000017565	-	70	34.946	ENSPPAG00000030518	MDM4	67	34.821	Pan_paniscus
ENSGAGG00000017565	-	80	66.901	ENSPPAG00000032775	MDM2	85	67.136	Pan_paniscus
ENSGAGG00000017565	-	85	63.556	ENSPPRG00000000082	MDM2	89	63.556	Panthera_pardus
ENSGAGG00000017565	-	69	35.246	ENSPPRG00000025076	MDM4	67	34.593	Panthera_pardus
ENSGAGG00000017565	-	85	63.556	ENSPTIG00000016929	MDM2	90	63.556	Panthera_tigris_altaica
ENSGAGG00000017565	-	69	34.511	ENSPTIG00000011372	MDM4	66	33.524	Panthera_tigris_altaica
ENSGAGG00000017565	-	80	66.901	ENSPTRG00000005203	MDM2	85	67.136	Pan_troglodytes
ENSGAGG00000017565	-	70	34.946	ENSPTRG00000001889	MDM4	67	34.821	Pan_troglodytes
ENSGAGG00000017565	-	80	66.901	ENSPANG00000005563	MDM2	86	67.136	Papio_anubis
ENSGAGG00000017565	-	70	34.160	ENSPANG00000008555	MDM4	67	34.694	Papio_anubis
ENSGAGG00000017565	-	71	89.757	ENSPSIG00000016379	-	84	89.757	Pelodiscus_sinensis
ENSGAGG00000017565	-	67	33.708	ENSPEMG00000018483	Mdm4	67	32.945	Peromyscus_maniculatus_bairdii
ENSGAGG00000017565	-	80	72.512	ENSPCIG00000005357	-	86	72.512	Phascolarctos_cinereus
ENSGAGG00000017565	-	67	34.561	ENSPCIG00000017446	MDM4	67	33.824	Phascolarctos_cinereus
ENSGAGG00000017565	-	70	35.040	ENSPPYG00000000315	MDM4	67	34.524	Pongo_abelii
ENSGAGG00000017565	-	80	65.962	ENSPPYG00000004754	MDM2	85	66.901	Pongo_abelii
ENSGAGG00000017565	-	85	61.062	ENSPCAG00000008949	MDM2	89	60.841	Procavia_capensis
ENSGAGG00000017565	-	67	34.085	ENSPCAG00000007019	MDM4	66	33.144	Procavia_capensis
ENSGAGG00000017565	-	70	65.241	ENSPCOG00000018521	-	84	66.578	Propithecus_coquereli
ENSGAGG00000017565	-	67	34.262	ENSPCOG00000024397	MDM4	67	34.513	Propithecus_coquereli
ENSGAGG00000017565	-	80	60.656	ENSPVAG00000006202	MDM2	85	60.890	Pteropus_vampyrus
ENSGAGG00000017565	-	67	34.659	ENSRNOG00000009696	Mdm4	67	33.923	Rattus_norvegicus
ENSGAGG00000017565	-	80	62.353	ENSRNOG00000006304	Mdm2	86	62.353	Rattus_norvegicus
ENSGAGG00000017565	-	70	33.424	ENSRBIG00000038824	MDM4	67	33.138	Rhinopithecus_bieti
ENSGAGG00000017565	-	80	66.901	ENSRBIG00000028561	MDM2	85	67.136	Rhinopithecus_bieti
ENSGAGG00000017565	-	80	66.432	ENSRROG00000045589	-	81	73.000	Rhinopithecus_roxellana
ENSGAGG00000017565	-	70	33.424	ENSRROG00000027771	MDM4	67	33.138	Rhinopithecus_roxellana
ENSGAGG00000017565	-	80	67.371	ENSSBOG00000014544	-	86	67.371	Saimiri_boliviensis_boliviensis
ENSGAGG00000017565	-	66	30.769	ENSSBOG00000020446	-	67	32.258	Saimiri_boliviensis_boliviensis
ENSGAGG00000017565	-	70	35.734	ENSSBOG00000036183	-	67	35.119	Saimiri_boliviensis_boliviensis
ENSGAGG00000017565	-	78	65.459	ENSSHAG00000000124	-	99	65.459	Sarcophilus_harrisii
ENSGAGG00000017565	-	72	35.222	ENSSHAG00000007767	MDM4	75	34.606	Sarcophilus_harrisii
ENSGAGG00000017565	-	80	71.362	ENSSHAG00000010284	-	86	70.892	Sarcophilus_harrisii
ENSGAGG00000017565	-	70	35.356	ENSSFOG00015001112	mdm4	71	35.143	Scleropages_formosus
ENSGAGG00000017565	-	80	62.441	ENSSARG00000005801	MDM2	86	62.441	Sorex_araneus
ENSGAGG00000017565	-	70	32.320	ENSSARG00000004179	MDM4	66	32.249	Sorex_araneus
ENSGAGG00000017565	-	85	72.949	ENSSPUG00000000964	MDM2	90	72.260	Sphenodon_punctatus
ENSGAGG00000017565	-	70	34.492	ENSSSCG00000015284	MDM4	66	34.024	Sus_scrofa
ENSGAGG00000017565	-	85	63.333	ENSSSCG00000000488	MDM2	92	63.333	Sus_scrofa
ENSGAGG00000017565	-	73	76.702	ENSTGUG00000006836	MDM2	82	76.501	Taeniopygia_guttata
ENSGAGG00000017565	-	58	51.125	ENSTBEG00000013758	MDM2	60	52.090	Tupaia_belangeri
ENSGAGG00000017565	-	68	67.536	ENSTTRG00000015715	MDM2	69	67.536	Tursiops_truncatus
ENSGAGG00000017565	-	70	35.457	ENSTTRG00000012174	MDM4	67	33.631	Tursiops_truncatus
ENSGAGG00000017565	-	70	34.807	ENSUAMG00000007328	MDM4	66	33.828	Ursus_americanus
ENSGAGG00000017565	-	80	65.581	ENSUAMG00000018322	-	87	67.925	Ursus_americanus
ENSGAGG00000017565	-	80	66.825	ENSUMAG00000020757	MDM2	90	64.350	Ursus_maritimus
ENSGAGG00000017565	-	70	32.708	ENSUMAG00000003452	MDM4	66	31.897	Ursus_maritimus
ENSGAGG00000017565	-	80	61.268	ENSVPAG00000007456	MDM2	84	61.268	Vicugna_pacos
ENSGAGG00000017565	-	67	34.000	ENSVPAG00000012034	MDM4	70	33.431	Vicugna_pacos
ENSGAGG00000017565	-	70	35.040	ENSVVUG00000014855	MDM4	67	34.104	Vulpes_vulpes
ENSGAGG00000017565	-	79	52.656	ENSXETG00000001434	mdm2	84	53.110	Xenopus_tropicalis