EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000017640 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 1501 bases
Position: chrPPEB01010308.1:37176-38676
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000024123	zf-C2H2	PF00096.26	3.3e-18	1	3
ENSGAGP00000024123	zf-C2H2	PF00096.26	3.3e-18	2	3
ENSGAGP00000024123	zf-C2H2	PF00096.26	3.3e-18	3	3
ENSGAGP00000024118	zf-C2H2	PF00096.26	2.2e-13	1	3
ENSGAGP00000024118	zf-C2H2	PF00096.26	2.2e-13	2	3
ENSGAGP00000024118	zf-C2H2	PF00096.26	2.2e-13	3	3
ENSGAGP00000024123	zf-met	PF12874.7	6.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000027464	-	792	-	ENSGAGP00000024118	263 (aa)	-	-
ENSGAGT00000027470	-	747	-	ENSGAGP00000024123	248 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017640's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000017640	-	57	46.903	ENSGAGG00000004926	-	94	46.903
ENSGAGG00000017640	-	78	56.863	ENSGAGG00000014356	-	81	52.414
ENSGAGG00000017640	-	80	51.408	ENSGAGG00000013851	-	96	47.368
ENSGAGG00000017640	-	93	51.639	ENSGAGG00000015451	-	99	45.977
ENSGAGG00000017640	-	92	57.463	ENSGAGG00000002214	-	94	57.463
ENSGAGG00000017640	-	50	41.463	ENSGAGG00000015899	GFI1	98	47.706
ENSGAGG00000017640	-	65	58.621	ENSGAGG00000019349	-	75	58.621
ENSGAGG00000017640	-	95	54.783	ENSGAGG00000020594	-	93	52.518
ENSGAGG00000017640	-	99	61.837	ENSGAGG00000002828	-	95	61.837
ENSGAGG00000017640	-	62	52.800	ENSGAGG00000006960	-	78	52.800
ENSGAGG00000017640	-	88	55.319	ENSGAGG00000002179	-	98	55.319
ENSGAGG00000017640	-	60	53.000	ENSGAGG00000020168	-	71	42.105
ENSGAGG00000017640	-	63	51.538	ENSGAGG00000005331	-	80	51.538
ENSGAGG00000017640	-	76	57.143	ENSGAGG00000001469	-	100	57.143
ENSGAGG00000017640	-	76	46.429	ENSGAGG00000011399	-	94	46.774
ENSGAGG00000017640	-	78	53.731	ENSGAGG00000017986	-	90	59.375
ENSGAGG00000017640	-	93	54.225	ENSGAGG00000008773	-	89	51.829
ENSGAGG00000017640	-	73	62.085	ENSGAGG00000005805	-	100	62.085
ENSGAGG00000017640	-	66	56.316	ENSGAGG00000010492	-	84	55.155
ENSGAGG00000017640	-	84	52.885	ENSGAGG00000012452	-	89	53.043
ENSGAGG00000017640	-	99	47.170	ENSGAGG00000006848	-	86	49.231
ENSGAGG00000017640	-	80	55.224	ENSGAGG00000006683	-	98	58.333
ENSGAGG00000017640	-	60	57.851	ENSGAGG00000009739	-	99	57.851
ENSGAGG00000017640	-	56	53.623	ENSGAGG00000001645	-	64	49.057
ENSGAGG00000017640	-	75	61.364	ENSGAGG00000014389	-	98	61.364
ENSGAGG00000017640	-	62	55.396	ENSGAGG00000000971	-	91	55.932
ENSGAGG00000017640	-	68	51.327	ENSGAGG00000016529	-	91	51.327
ENSGAGG00000017640	-	59	53.097	ENSGAGG00000015232	-	60	58.163
ENSGAGG00000017640	-	79	53.247	ENSGAGG00000018445	-	100	53.247
ENSGAGG00000017640	-	67	52.500	ENSGAGG00000006846	-	88	52.500
ENSGAGG00000017640	-	98	61.151	ENSGAGG00000020134	-	70	61.379
ENSGAGG00000017640	-	95	59.712	ENSGAGG00000010324	-	84	62.602
ENSGAGG00000017640	-	79	60.465	ENSGAGG00000011487	-	83	59.524
ENSGAGG00000017640	-	94	60.000	ENSGAGG00000004740	-	91	60.000
ENSGAGG00000017640	-	78	53.077	ENSGAGG00000011574	-	97	53.077
ENSGAGG00000017640	-	94	63.566	ENSGAGG00000006323	-	94	62.687
ENSGAGG00000017640	-	63	51.587	ENSGAGG00000007230	-	89	49.701
ENSGAGG00000017640	-	94	49.162	ENSGAGG00000010833	-	91	57.843
ENSGAGG00000017640	-	87	57.143	ENSGAGG00000009272	-	99	57.143
ENSGAGG00000017640	-	77	46.512	ENSGAGG00000018885	-	77	46.324
ENSGAGG00000017640	-	62	41.844	ENSGAGG00000013021	-	97	41.844

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017640	-	73	51.240	ENSACIG00000017013	-	69	51.240	Amphilophus_citrinellus
ENSGAGG00000017640	-	57	52.419	ENSAMXG00000035683	-	92	52.419	Astyanax_mexicanus
ENSGAGG00000017640	-	64	48.980	ENSCPBG00000002063	-	58	48.980	Chrysemys_picta_bellii
ENSGAGG00000017640	-	56	49.138	ENSHCOG00000014786	-	94	49.138	Hippocampus_comes
ENSGAGG00000017640	-	61	45.161	ENSHCOG00000001292	-	67	45.161	Hippocampus_comes
ENSGAGG00000017640	-	65	47.973	ENSIPUG00000015203	-	50	47.973	Ictalurus_punctatus
ENSGAGG00000017640	-	56	60.577	ENSIPUG00000015601	-	50	60.577	Ictalurus_punctatus
ENSGAGG00000017640	-	84	41.509	ENSORLG00020001707	-	79	41.509	Oryzias_latipes_hni
ENSGAGG00000017640	-	60	53.543	ENSPCIG00000019333	-	94	50.345	Phascolarctos_cinereus
ENSGAGG00000017640	-	73	38.983	ENSPMEG00000016762	-	89	36.190	Poecilia_mexicana
ENSGAGG00000017640	-	61	53.279	ENSPNAG00000008491	-	73	55.085	Pygocentrus_nattereri
ENSGAGG00000017640	-	57	52.137	ENSPNAG00000009741	-	56	52.137	Pygocentrus_nattereri
ENSGAGG00000017640	-	62	46.629	ENSPNAG00000018409	-	86	46.629	Pygocentrus_nattereri