EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000017672 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 48480 bases
Position: chrPPEB01003436.1:7757-56236
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000024182	RRM_1	PF00076.22	7e-40	1	2
ENSGAGP00000024182	RRM_1	PF00076.22	7e-40	2	2
ENSGAGP00000024188	RRM_1	PF00076.22	2.1e-38	1	2
ENSGAGP00000024188	RRM_1	PF00076.22	2.1e-38	2	2
ENSGAGP00000024183	RRM_1	PF00076.22	9.9e-38	1	2
ENSGAGP00000024183	RRM_1	PF00076.22	9.9e-38	2	2
ENSGAGP00000024186	RRM_1	PF00076.22	3.3e-37	1	2
ENSGAGP00000024186	RRM_1	PF00076.22	3.3e-37	2	2
ENSGAGP00000024194	RRM_1	PF00076.22	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000027536	-	1389	-	ENSGAGP00000024186	462 (aa)	-	-
ENSGAGT00000027532	-	1257	-	ENSGAGP00000024182	418 (aa)	-	-
ENSGAGT00000027533	-	1245	-	ENSGAGP00000024183	414 (aa)	-	-
ENSGAGT00000027538	-	1131	-	ENSGAGP00000024188	376 (aa)	-	-
ENSGAGT00000027544	-	816	-	ENSGAGP00000024194	271 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000017672	-	63	76.344	ENSGAGG00000011562	CELF1	97	40.535
ENSGAGG00000017672	-	82	65.819	ENSGAGG00000010368	-	83	65.915
ENSGAGG00000017672	-	99	53.538	ENSGAGG00000019676	CELF3	98	56.203
ENSGAGG00000017672	-	78	31.818	ENSGAGG00000023119	TIAL1	71	31.818
ENSGAGG00000017672	-	92	31.250	ENSGAGG00000024119	ELAVL1	93	32.955
ENSGAGG00000017672	-	66	35.802	ENSGAGG00000000381	RBMS2	51	35.802
ENSGAGG00000017672	-	50	33.784	ENSGAGG00000013289	PUF60	74	33.735
ENSGAGG00000017672	-	93	37.805	ENSGAGG00000018269	ELAVL4	92	37.805
ENSGAGG00000017672	-	93	39.024	ENSGAGG00000022382	ELAVL2	91	39.024
ENSGAGG00000017672	-	72	60.064	ENSGAGG00000023014	-	98	59.744
ENSGAGG00000017672	-	61	37.037	ENSGAGG00000007866	RBMS1	51	37.037
ENSGAGG00000017672	-	76	35.443	ENSGAGG00000007529	TIA1	69	35.443
ENSGAGG00000017672	-	77	59.211	ENSGAGG00000023497	CELF2	90	56.849
ENSGAGG00000017672	-	63	38.554	ENSGAGG00000016141	ELAVL3	70	38.554

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017672	-	99	60.364	ENSG00000101489	CELF4	100	88.060	Homo_sapiens
ENSGAGG00000017672	-	86	90.217	ENSAPOG00000002964	celf4	71	85.185	Acanthochromis_polyacanthus
ENSGAGG00000017672	-	85	57.480	ENSAMEG00000017059	CELF4	88	62.890	Ailuropoda_melanoleuca
ENSGAGG00000017672	-	99	52.494	ENSACIG00000018097	celf4	88	59.544	Amphilophus_citrinellus
ENSGAGG00000017672	-	82	63.821	ENSAOCG00000019919	-	79	71.815	Amphiprion_ocellaris
ENSGAGG00000017672	-	86	90.217	ENSAOCG00000020590	celf4	71	85.185	Amphiprion_ocellaris
ENSGAGG00000017672	-	99	55.000	ENSAPEG00000002940	celf4	87	60.102	Amphiprion_percula
ENSGAGG00000017672	-	99	55.000	ENSATEG00000023731	celf4	88	60.102	Anabas_testudineus
ENSGAGG00000017672	-	82	54.912	ENSAPLG00000007830	-	100	54.660	Anas_platyrhynchos
ENSGAGG00000017672	-	54	58.943	ENSACAG00000012428	CELF4	95	60.924	Anolis_carolinensis
ENSGAGG00000017672	-	99	59.545	ENSANAG00000029499	CELF4	89	64.320	Aotus_nancymaae
ENSGAGG00000017672	-	86	90.217	ENSACLG00000011828	celf4	71	85.185	Astatotilapia_calliptera
ENSGAGG00000017672	-	88	90.217	ENSAMXG00000007935	celf4	73	86.111	Astyanax_mexicanus
ENSGAGG00000017672	-	99	61.268	ENSBTAG00000004940	CELF4	87	67.347	Bos_taurus
ENSGAGG00000017672	-	99	59.453	ENSCJAG00000021135	CELF4	89	64.234	Callithrix_jacchus
ENSGAGG00000017672	-	99	60.698	ENSCHIG00000007169	CELF4	87	61.850	Capra_hircus
ENSGAGG00000017672	-	86	60.938	ENSTSYG00000000816	CELF4	85	62.760	Carlito_syrichta
ENSGAGG00000017672	-	89	64.339	ENSCPOG00000035956	CELF4	81	67.176	Cavia_porcellus
ENSGAGG00000017672	-	99	59.545	ENSCCAG00000028373	CELF4	89	64.320	Cebus_capucinus
ENSGAGG00000017672	-	99	59.453	ENSCATG00000045293	CELF4	89	64.234	Cercocebus_atys
ENSGAGG00000017672	-	99	62.780	ENSCLAG00000008344	CELF4	89	65.227	Chinchilla_lanigera
ENSGAGG00000017672	-	82	67.042	ENSCSAG00000017933	CELF4	100	68.258	Chlorocebus_sabaeus
ENSGAGG00000017672	-	82	61.538	ENSCPBG00000005237	CELF4	93	62.849	Chrysemys_picta_bellii
ENSGAGG00000017672	-	99	59.545	ENSCANG00000036735	CELF4	89	64.320	Colobus_angolensis_palliatus
ENSGAGG00000017672	-	87	59.173	ENSCGRG00001018085	Celf4	89	60.209	Cricetulus_griseus_chok1gshd
ENSGAGG00000017672	-	86	90.217	ENSCSEG00000007074	celf4	71	85.185	Cynoglossus_semilaevis
ENSGAGG00000017672	-	99	55.238	ENSCVAG00000017617	celf4	88	59.551	Cyprinodon_variegatus
ENSGAGG00000017672	-	88	90.217	ENSDARG00000070045	celf4	76	86.111	Danio_rerio
ENSGAGG00000017672	-	85	64.946	ENSDNOG00000032492	CELF4	99	66.304	Dasypus_novemcinctus
ENSGAGG00000017672	-	99	62.780	ENSDORG00000007169	Celf4	89	65.227	Dipodomys_ordii
ENSGAGG00000017672	-	99	60.698	ENSEASG00005016534	CELF4	89	59.453	Equus_asinus_asinus
ENSGAGG00000017672	-	99	59.453	ENSECAG00000008810	CELF4	89	64.234	Equus_caballus
ENSGAGG00000017672	-	75	49.515	ENSEEUG00000003763	CELF4	72	53.727	Erinaceus_europaeus
ENSGAGG00000017672	-	99	60.698	ENSFCAG00000045234	CELF4	89	59.453	Felis_catus
ENSGAGG00000017672	-	82	68.169	ENSFALG00000009188	CELF4	98	67.887	Ficedula_albicollis
ENSGAGG00000017672	-	86	64.615	ENSFDAG00000010287	CELF4	80	67.539	Fukomys_damarensis
ENSGAGG00000017672	-	82	50.125	ENSFHEG00000003431	celf4	88	50.376	Fundulus_heteroclitus
ENSGAGG00000017672	-	73	84.545	ENSGMOG00000008703	celf4	60	79.808	Gadus_morhua
ENSGAGG00000017672	-	68	92.683	ENSGMOG00000011747	-	75	92.683	Gadus_morhua
ENSGAGG00000017672	-	88	90.217	ENSGAFG00000021515	celf4	73	85.185	Gambusia_affinis
ENSGAGG00000017672	-	86	86.170	ENSGACG00000008752	celf4	88	55.556	Gasterosteus_aculeatus
ENSGAGG00000017672	-	99	59.545	ENSGGOG00000013920	CELF4	89	64.320	Gorilla_gorilla
ENSGAGG00000017672	-	86	90.217	ENSHBUG00000021618	celf4	71	85.185	Haplochromis_burtoni
ENSGAGG00000017672	-	99	58.744	ENSHGLG00000003130	CELF4	89	64.390	Heterocephalus_glaber_female
ENSGAGG00000017672	-	99	62.108	ENSHGLG00100006394	CELF4	89	68.049	Heterocephalus_glaber_male
ENSGAGG00000017672	-	99	56.563	ENSHCOG00000012195	celf4	89	58.543	Hippocampus_comes
ENSGAGG00000017672	-	99	59.048	ENSIPUG00000010810	celf4	89	58.947	Ictalurus_punctatus
ENSGAGG00000017672	-	99	61.883	ENSJJAG00000016892	Celf4	89	67.805	Jaculus_jaculus
ENSGAGG00000017672	-	86	90.217	ENSKMAG00000019602	celf4	71	85.185	Kryptolebias_marmoratus
ENSGAGG00000017672	-	99	54.762	ENSLBEG00000000940	celf4	87	59.847	Labrus_bergylta
ENSGAGG00000017672	-	78	90.217	ENSLOCG00000004792	celf4	74	85.185	Lepisosteus_oculatus
ENSGAGG00000017672	-	99	63.004	ENSLAFG00000021352	CELF4	100	67.816	Loxodonta_africana
ENSGAGG00000017672	-	99	59.545	ENSMFAG00000042983	CELF4	89	64.320	Macaca_fascicularis
ENSGAGG00000017672	-	99	60.046	ENSMMUG00000006866	CELF4	89	60.278	Macaca_mulatta
ENSGAGG00000017672	-	99	60.698	ENSMNEG00000033449	CELF4	89	59.453	Macaca_nemestrina
ENSGAGG00000017672	-	77	63.235	ENSMLEG00000028543	CELF4	77	66.566	Mandrillus_leucophaeus
ENSGAGG00000017672	-	99	55.000	ENSMAMG00000018573	celf4	87	60.102	Mastacembelus_armatus
ENSGAGG00000017672	-	99	51.074	ENSMZEG00005026879	celf4	88	55.775	Maylandia_zebra
ENSGAGG00000017672	-	78	47.222	ENSMGAG00000017029	CELF4	100	50.779	Meleagris_gallopavo
ENSGAGG00000017672	-	99	59.453	ENSMICG00000006984	CELF4	89	64.234	Microcebus_murinus
ENSGAGG00000017672	-	99	62.332	ENSMOCG00000011985	Celf4	89	68.293	Microtus_ochrogaster
ENSGAGG00000017672	-	99	54.524	ENSMMOG00000012281	celf4	88	58.708	Mola_mola
ENSGAGG00000017672	-	75	63.415	ENSMODG00000000306	CELF4	91	57.471	Monodelphis_domestica
ENSGAGG00000017672	-	86	90.217	ENSMALG00000001696	celf4	71	85.185	Monopterus_albus
ENSGAGG00000017672	-	99	62.556	MGP_CAROLIEiJ_G0022058	Celf4	95	64.078	Mus_caroli
ENSGAGG00000017672	-	99	64.651	ENSMUSG00000024268	Celf4	89	65.000	Mus_musculus
ENSGAGG00000017672	-	99	62.556	MGP_PahariEiJ_G0018792	Celf4	95	64.078	Mus_pahari
ENSGAGG00000017672	-	99	62.556	MGP_SPRETEiJ_G0022969	Celf4	100	62.663	Mus_spretus
ENSGAGG00000017672	-	79	92.222	ENSMPUG00000001027	CELF4	78	85.047	Mustela_putorius_furo
ENSGAGG00000017672	-	86	65.416	ENSMLUG00000001755	CELF4	100	66.756	Myotis_lucifugus
ENSGAGG00000017672	-	99	62.780	ENSNGAG00000000761	Celf4	87	65.227	Nannospalax_galili
ENSGAGG00000017672	-	99	51.074	ENSNBRG00000018194	celf4	88	55.775	Neolamprologus_brichardi
ENSGAGG00000017672	-	75	64.563	ENSMEUG00000007202	-	100	59.885	Notamacropus_eugenii
ENSGAGG00000017672	-	81	69.369	ENSOPRG00000014415	CELF4	78	72.072	Ochotona_princeps
ENSGAGG00000017672	-	99	62.780	ENSODEG00000018464	CELF4	89	68.780	Octodon_degus
ENSGAGG00000017672	-	86	90.217	ENSONIG00000019463	celf4	71	85.185	Oreochromis_niloticus
ENSGAGG00000017672	-	84	60.705	ENSOCUG00000024790	CELF4	71	66.569	Oryctolagus_cuniculus
ENSGAGG00000017672	-	86	90.217	ENSORLG00000008913	celf4	71	85.185	Oryzias_latipes
ENSGAGG00000017672	-	86	90.217	ENSORLG00020008454	celf4	71	85.185	Oryzias_latipes_hni
ENSGAGG00000017672	-	86	90.217	ENSORLG00015004115	celf4	89	67.828	Oryzias_latipes_hsok
ENSGAGG00000017672	-	86	90.217	ENSOMEG00000002391	celf4	71	85.185	Oryzias_melastigma
ENSGAGG00000017672	-	74	92.391	ENSOGAG00000010018	CELF4	100	60.471	Otolemur_garnettii
ENSGAGG00000017672	-	72	64.968	ENSOARG00000005276	CELF4	100	64.650	Ovis_aries
ENSGAGG00000017672	-	89	58.838	ENSPPAG00000020644	CELF4	85	61.538	Pan_paniscus
ENSGAGG00000017672	-	99	59.545	ENSPPRG00000007683	CELF4	89	64.320	Panthera_pardus
ENSGAGG00000017672	-	99	59.545	ENSPTRG00000009982	CELF4	89	64.320	Pan_troglodytes
ENSGAGG00000017672	-	99	59.545	ENSPANG00000006365	CELF4	89	64.320	Papio_anubis
ENSGAGG00000017672	-	90	70.000	ENSPKIG00000017421	celf4	88	58.824	Paramormyrops_kingsleyae
ENSGAGG00000017672	-	82	68.169	ENSPSIG00000015538	CELF4	98	67.887	Pelodiscus_sinensis
ENSGAGG00000017672	-	99	62.556	ENSPEMG00000019299	Celf4	89	65.000	Peromyscus_maniculatus_bairdii
ENSGAGG00000017672	-	82	59.292	ENSPLAG00000012151	celf4	79	63.542	Poecilia_latipinna
ENSGAGG00000017672	-	84	85.714	ENSPMEG00000015313	celf4	85	85.714	Poecilia_mexicana
ENSGAGG00000017672	-	86	90.217	ENSPREG00000021231	celf4	71	85.185	Poecilia_reticulata
ENSGAGG00000017672	-	70	78.351	ENSPCAG00000000126	CELF4	71	78.351	Procavia_capensis
ENSGAGG00000017672	-	99	59.545	ENSPVAG00000009204	CELF4	89	64.320	Pteropus_vampyrus
ENSGAGG00000017672	-	99	51.074	ENSPNYG00000004131	celf4	88	55.775	Pundamilia_nyererei
ENSGAGG00000017672	-	88	90.217	ENSPNAG00000006426	celf4	73	86.111	Pygocentrus_nattereri
ENSGAGG00000017672	-	81	58.571	ENSRNOG00000014503	Celf4	100	60.571	Rattus_norvegicus
ENSGAGG00000017672	-	99	60.698	ENSRBIG00000035924	CELF4	89	59.453	Rhinopithecus_bieti
ENSGAGG00000017672	-	99	59.545	ENSRROG00000014839	CELF4	89	64.320	Rhinopithecus_roxellana
ENSGAGG00000017672	-	99	58.636	ENSSBOG00000030001	CELF4	89	60.227	Saimiri_boliviensis_boliviensis
ENSGAGG00000017672	-	87	55.556	ENSSHAG00000009193	CELF4	97	63.333	Sarcophilus_harrisii
ENSGAGG00000017672	-	90	79.630	ENSSFOG00015010874	celf4	90	62.344	Scleropages_formosus
ENSGAGG00000017672	-	86	90.217	ENSSMAG00000009331	celf4	72	85.185	Scophthalmus_maximus
ENSGAGG00000017672	-	99	49.537	ENSSLDG00000018548	celf4	88	47.118	Seriola_lalandi_dorsalis
ENSGAGG00000017672	-	99	52.546	ENSSPAG00000018307	celf4	88	50.125	Stegastes_partitus
ENSGAGG00000017672	-	83	90.476	ENSSSCG00000003748	CELF4	89	64.320	Sus_scrofa
ENSGAGG00000017672	-	82	68.169	ENSTGUG00000001649	CELF4	98	67.887	Taeniopygia_guttata
ENSGAGG00000017672	-	99	53.095	ENSTRUG00000015481	celf4	88	58.312	Takifugu_rubripes
ENSGAGG00000017672	-	99	57.079	ENSTNIG00000010679	celf4	84	56.854	Tetraodon_nigroviridis
ENSGAGG00000017672	-	82	60.784	ENSTBEG00000010647	CELF4	80	62.745	Tupaia_belangeri
ENSGAGG00000017672	-	99	59.318	ENSTTRG00000016826	CELF4	89	64.078	Tursiops_truncatus
ENSGAGG00000017672	-	77	62.319	ENSUAMG00000005506	CELF4	83	64.348	Ursus_americanus
ENSGAGG00000017672	-	99	60.698	ENSVVUG00000027721	CELF4	89	59.453	Vulpes_vulpes
ENSGAGG00000017672	-	86	64.456	ENSXETG00000020486	celf4	98	65.854	Xenopus_tropicalis
ENSGAGG00000017672	-	93	67.866	ENSXCOG00000017592	celf4	92	68.112	Xiphophorus_couchianus
ENSGAGG00000017672	-	86	90.217	ENSXMAG00000018178	celf4	72	85.185	Xiphophorus_maculatus