EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGAGG00000017685 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Minus strand
Length
48334 bases
Position
chrPPEB01004604.1:57086-105419
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000024185CSDPF00313.222e-8515
ENSGAGP00000024185CSDPF00313.222e-8525
ENSGAGP00000024185CSDPF00313.222e-8535
ENSGAGP00000024185CSDPF00313.222e-8545
ENSGAGP00000024185CSDPF00313.222e-8555
ENSGAGP00000024180CSDPF00313.223.2e-8515
ENSGAGP00000024180CSDPF00313.223.2e-8525
ENSGAGP00000024180CSDPF00313.223.2e-8535
ENSGAGP00000024180CSDPF00313.223.2e-8545
ENSGAGP00000024180CSDPF00313.223.2e-8555
ENSGAGP00000024178CSDPF00313.223.8e-8515
ENSGAGP00000024178CSDPF00313.223.8e-8525
ENSGAGP00000024178CSDPF00313.223.8e-8535
ENSGAGP00000024178CSDPF00313.223.8e-8545
ENSGAGP00000024178CSDPF00313.223.8e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000027535CSDE1-2034037-ENSGAGP00000024185796 (aa)--
ENSGAGT00000027528CSDE1-2014187-ENSGAGP00000024178843 (aa)--
ENSGAGT00000027530CSDE1-2024094-ENSGAGP00000024180812 (aa)--
Gene Model
Click here to download ENSGAGG00000017685's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017685's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000017685CSDE110092.231ENSG00000009307CSDE1100100.000Homo_sapiens
ENSGAGG00000017685CSDE110077.534ENSAPOG00000015538csde110079.844Acanthochromis_polyacanthus
ENSGAGG00000017685CSDE110089.926ENSAMEG00000017129CSDE110089.926Ailuropoda_melanoleuca
ENSGAGG00000017685CSDE18780.000ENSACIG00000015175csde110080.000Amphilophus_citrinellus
ENSGAGG00000017685CSDE110077.656ENSAOCG00000011510csde110079.974Amphiprion_ocellaris
ENSGAGG00000017685CSDE110079.500ENSAPEG00000007194csde110079.974Amphiprion_percula
ENSGAGG00000017685CSDE110076.404ENSATEG00000003864csde110079.481Anabas_testudineus
ENSGAGG00000017685CSDE110091.960ENSAPLG00000008797CSDE110095.686Anas_platyrhynchos
ENSGAGG00000017685CSDE110096.106ENSACAG00000003120CSDE110096.106Anolis_carolinensis
ENSGAGG00000017685CSDE110092.231ENSANAG00000024665CSDE110090.651Aotus_nancymaae
ENSGAGG00000017685CSDE18770.922ENSANAG00000028396-9171.769Aotus_nancymaae
ENSGAGG00000017685CSDE110079.000ENSACLG00000013296csde110079.454Astatotilapia_calliptera
ENSGAGG00000017685CSDE110075.686ENSAMXG00000007436csde110078.729Astyanax_mexicanus
ENSGAGG00000017685CSDE110091.980ENSBTAG00000000678CSDE110091.656Bos_taurus
ENSGAGG00000017685CSDE110092.356ENSCJAG00000012565CSDE110090.769Callithrix_jacchus
ENSGAGG00000017685CSDE19888.107ENSCAFG00000009618CSDE19990.226Canis_familiaris
ENSGAGG00000017685CSDE110088.221ENSCAFG00020000481CSDE110091.786Canis_lupus_dingo
ENSGAGG00000017685CSDE110091.980ENSCHIG00000017250CSDE110091.656Capra_hircus
ENSGAGG00000017685CSDE110092.231ENSTSYG00000003747CSDE110092.231Carlito_syrichta
ENSGAGG00000017685CSDE110093.865ENSCAPG00000015128CSDE110093.865Cavia_aperea
ENSGAGG00000017685CSDE110086.842ENSCPOG00000040388CSDE110086.842Cavia_porcellus
ENSGAGG00000017685CSDE19566.832ENSCCAG00000033677-9966.746Cebus_capucinus
ENSGAGG00000017685CSDE19765.479ENSCCAG00000030878-9165.479Cebus_capucinus
ENSGAGG00000017685CSDE110092.356ENSCCAG00000036794CSDE110092.356Cebus_capucinus
ENSGAGG00000017685CSDE110092.231ENSCATG00000036962CSDE110090.651Cercocebus_atys
ENSGAGG00000017685CSDE110091.980ENSCLAG00000006618CSDE110091.980Chinchilla_lanigera
ENSGAGG00000017685CSDE110092.231ENSCSAG00000001658CSDE110090.651Chlorocebus_sabaeus
ENSGAGG00000017685CSDE110097.087ENSCHOG00000000918CSDE19192.945Choloepus_hoffmanni
ENSGAGG00000017685CSDE110099.372ENSCPBG00000016547CSDE110099.372Chrysemys_picta_bellii
ENSGAGG00000017685CSDE19743.190ENSCING00000014465-9643.190Ciona_intestinalis
ENSGAGG00000017685CSDE19643.142ENSCSAVG00000008100-9843.142Ciona_savignyi
ENSGAGG00000017685CSDE110092.231ENSCANG00000035096CSDE110090.533Colobus_angolensis_palliatus
ENSGAGG00000017685CSDE19985.267ENSCANG00000031069-9492.565Colobus_angolensis_palliatus
ENSGAGG00000017685CSDE110072.807ENSCGRG00001014011-10075.750Cricetulus_griseus_chok1gshd
ENSGAGG00000017685CSDE110091.479ENSCGRG00001016833-10091.479Cricetulus_griseus_chok1gshd
ENSGAGG00000017685CSDE19787.751ENSCGRG00000002225-10087.751Cricetulus_griseus_crigri
ENSGAGG00000017685CSDE19483.478ENSCGRG00000005831-10083.478Cricetulus_griseus_crigri
ENSGAGG00000017685CSDE110076.063ENSCSEG00000002620csde110078.804Cynoglossus_semilaevis
ENSGAGG00000017685CSDE110078.875ENSCVAG00000001344csde110079.091Cyprinodon_variegatus
ENSGAGG00000017685CSDE110079.526ENSDARG00000074758csde110079.526Danio_rerio
ENSGAGG00000017685CSDE110088.235ENSDNOG00000010287-9491.451Dasypus_novemcinctus
ENSGAGG00000017685CSDE17766.540ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSGAGG00000017685CSDE110091.729ENSDORG00000011609Csde110091.729Dipodomys_ordii
ENSGAGG00000017685CSDE19748.980FBgn0263352Unr7548.394Drosophila_melanogaster
ENSGAGG00000017685CSDE19078.399ENSETEG00000006280-9982.250Echinops_telfairi
ENSGAGG00000017685CSDE19969.095ENSETEG00000013678-9971.895Echinops_telfairi
ENSGAGG00000017685CSDE110095.041ENSETEG00000002491-8095.041Echinops_telfairi
ENSGAGG00000017685CSDE17664.735ENSETEG00000007109-9964.735Echinops_telfairi
ENSGAGG00000017685CSDE19955.774ENSEBUG00000008647csde19954.048Eptatretus_burgeri
ENSGAGG00000017685CSDE110092.356ENSEASG00005006284CSDE110092.356Equus_asinus_asinus
ENSGAGG00000017685CSDE110092.356ENSECAG00000020885CSDE110092.356Equus_caballus
ENSGAGG00000017685CSDE19392.147ENSEEUG00000006286CSDE17492.147Erinaceus_europaeus
ENSGAGG00000017685CSDE110075.483ENSELUG00000015507csde110077.102Esox_lucius
ENSGAGG00000017685CSDE110092.231ENSFCAG00000029266CSDE110091.917Felis_catus
ENSGAGG00000017685CSDE110095.352ENSFALG00000003407CSDE110095.352Ficedula_albicollis
ENSGAGG00000017685CSDE110091.855ENSFDAG00000007882CSDE110091.855Fukomys_damarensis
ENSGAGG00000017685CSDE110078.777ENSFHEG00000010799csde110078.777Fundulus_heteroclitus
ENSGAGG00000017685CSDE19978.849ENSGMOG00000012731csde110078.849Gadus_morhua
ENSGAGG00000017685CSDE19895.519ENSGALG00000002139CSDE19895.519Gallus_gallus
ENSGAGG00000017685CSDE19375.400ENSGAFG00000005241csde19578.963Gambusia_affinis
ENSGAGG00000017685CSDE19979.125ENSGACG00000004544csde110079.125Gasterosteus_aculeatus
ENSGAGG00000017685CSDE110092.231ENSGGOG00000002164CSDE110091.917Gorilla_gorilla
ENSGAGG00000017685CSDE110078.234ENSHBUG00000020315csde110079.454Haplochromis_burtoni
ENSGAGG00000017685CSDE110077.068ENSHGLG00000019549-10077.068Heterocephalus_glaber_female
ENSGAGG00000017685CSDE110082.957ENSHGLG00000009620-10083.208Heterocephalus_glaber_female
ENSGAGG00000017685CSDE110079.323ENSHGLG00000003829-10082.529Heterocephalus_glaber_female
ENSGAGG00000017685CSDE19974.028ENSHGLG00000000650-9974.028Heterocephalus_glaber_female
ENSGAGG00000017685CSDE19679.510ENSHGLG00000010039-10079.510Heterocephalus_glaber_female
ENSGAGG00000017685CSDE19981.777ENSHGLG00000008555-10081.737Heterocephalus_glaber_female
ENSGAGG00000017685CSDE19977.146ENSHGLG00000007471-9879.238Heterocephalus_glaber_female
ENSGAGG00000017685CSDE19679.510ENSHGLG00100006910-10079.510Heterocephalus_glaber_male
ENSGAGG00000017685CSDE19975.284ENSHGLG00100007287-9877.297Heterocephalus_glaber_male
ENSGAGG00000017685CSDE19978.348ENSHGLG00100002245-9978.348Heterocephalus_glaber_male
ENSGAGG00000017685CSDE110092.105ENSHGLG00100019438-10092.105Heterocephalus_glaber_male
ENSGAGG00000017685CSDE19773.274ENSHGLG00100004833-10073.274Heterocephalus_glaber_male
ENSGAGG00000017685CSDE110071.930ENSHGLG00100001846-10074.609Heterocephalus_glaber_male
ENSGAGG00000017685CSDE19474.933ENSHGLG00100004195-10078.182Heterocephalus_glaber_male
ENSGAGG00000017685CSDE110074.937ENSHGLG00100012072-10077.966Heterocephalus_glaber_male
ENSGAGG00000017685CSDE110077.375ENSHCOG00000004158csde110077.763Hippocampus_comes
ENSGAGG00000017685CSDE110074.314ENSIPUG00000000355csde110077.302Ictalurus_punctatus
ENSGAGG00000017685CSDE18669.231ENSSTOG00000032722-9969.231Ictidomys_tridecemlineatus
ENSGAGG00000017685CSDE110074.751ENSSTOG00000030994-10075.128Ictidomys_tridecemlineatus
ENSGAGG00000017685CSDE110091.604ENSJJAG00000019571Csde110091.604Jaculus_jaculus
ENSGAGG00000017685CSDE110078.385ENSKMAG00000005685csde110077.998Kryptolebias_marmoratus
ENSGAGG00000017685CSDE110077.439ENSLBEG00000014770csde110079.740Labrus_bergylta
ENSGAGG00000017685CSDE110081.390ENSLACG00000018452CSDE19680.952Latimeria_chalumnae
ENSGAGG00000017685CSDE110081.807ENSLOCG00000010413csde19581.953Lepisosteus_oculatus
ENSGAGG00000017685CSDE110087.719ENSLAFG00000007150CSDE19690.921Loxodonta_africana
ENSGAGG00000017685CSDE110092.231ENSMFAG00000003674CSDE110091.917Macaca_fascicularis
ENSGAGG00000017685CSDE110092.231ENSMMUG00000001974CSDE110091.917Macaca_mulatta
ENSGAGG00000017685CSDE110092.231ENSMNEG00000045247CSDE110090.651Macaca_nemestrina
ENSGAGG00000017685CSDE110091.980ENSMLEG00000038673CSDE110090.414Mandrillus_leucophaeus
ENSGAGG00000017685CSDE110078.144ENSMAMG00000008821csde110080.364Mastacembelus_armatus
ENSGAGG00000017685CSDE110079.000ENSMZEG00005021675csde110079.454Maylandia_zebra
ENSGAGG00000017685CSDE19895.647ENSMGAG00000016381CSDE110095.431Meleagris_gallopavo
ENSGAGG00000017685CSDE110091.479ENSMAUG00000014031Csde110091.479Mesocricetus_auratus
ENSGAGG00000017685CSDE110091.980ENSMICG00000002050CSDE110090.533Microcebus_murinus
ENSGAGG00000017685CSDE110091.479ENSMOCG00000018960Csde110091.479Microtus_ochrogaster
ENSGAGG00000017685CSDE110076.404ENSMMOG00000015075csde110079.481Mola_mola
ENSGAGG00000017685CSDE110093.734ENSMODG00000004685CSDE110093.734Monodelphis_domestica
ENSGAGG00000017685CSDE110076.779ENSMALG00000007132csde110079.870Monopterus_albus
ENSGAGG00000017685CSDE110091.604MGP_CAROLIEiJ_G0025444Csde110094.040Mus_caroli
ENSGAGG00000017685CSDE110091.729ENSMUSG00000068823Csde110094.040Mus_musculus
ENSGAGG00000017685CSDE110091.604MGP_PahariEiJ_G0026888Csde110094.040Mus_pahari
ENSGAGG00000017685CSDE110091.604MGP_SPRETEiJ_G0026394Csde110094.040Mus_spretus
ENSGAGG00000017685CSDE19892.199ENSMPUG00000005753CSDE19992.199Mustela_putorius_furo
ENSGAGG00000017685CSDE110087.845ENSMLUG00000005681CSDE110089.681Myotis_lucifugus
ENSGAGG00000017685CSDE19763.474ENSNGAG00000012599-10063.474Nannospalax_galili
ENSGAGG00000017685CSDE110091.729ENSNGAG00000021929Csde110091.729Nannospalax_galili
ENSGAGG00000017685CSDE110076.375ENSNBRG00000020808csde110079.454Neolamprologus_brichardi
ENSGAGG00000017685CSDE110092.105ENSNLEG00000004842CSDE110090.533Nomascus_leucogenys
ENSGAGG00000017685CSDE19899.029ENSMEUG00000002677CSDE19599.029Notamacropus_eugenii
ENSGAGG00000017685CSDE19897.087ENSOPRG00000005002CSDE18886.083Ochotona_princeps
ENSGAGG00000017685CSDE110091.479ENSODEG00000007383-10091.479Octodon_degus
ENSGAGG00000017685CSDE19761.504ENSODEG00000005979-9861.504Octodon_degus
ENSGAGG00000017685CSDE110077.167ENSONIG00000009309csde110077.167Oreochromis_niloticus
ENSGAGG00000017685CSDE110078.304ENSOANG00000003346-10078.304Ornithorhynchus_anatinus
ENSGAGG00000017685CSDE110091.729ENSOCUG00000016438CSDE19691.728Oryctolagus_cuniculus
ENSGAGG00000017685CSDE110077.262ENSORLG00000000707csde110079.688Oryzias_latipes
ENSGAGG00000017685CSDE110078.849ENSORLG00020005148csde110077.017Oryzias_latipes_hni
ENSGAGG00000017685CSDE110078.849ENSORLG00015019415csde110079.427Oryzias_latipes_hsok
ENSGAGG00000017685CSDE110078.875ENSOMEG00000015656csde110079.454Oryzias_melastigma
ENSGAGG00000017685CSDE110091.155ENSOGAG00000012127CSDE110090.663Otolemur_garnettii
ENSGAGG00000017685CSDE110088.095ENSOARG00000020034CSDE110090.172Ovis_aries
ENSGAGG00000017685CSDE110092.231ENSPPAG00000025861CSDE110091.917Pan_paniscus
ENSGAGG00000017685CSDE110092.231ENSPPRG00000006747CSDE110090.769Panthera_pardus
ENSGAGG00000017685CSDE110092.231ENSPTIG00000015468CSDE110092.231Panthera_tigris_altaica
ENSGAGG00000017685CSDE110092.231ENSPTRG00000033721CSDE110092.231Pan_troglodytes
ENSGAGG00000017685CSDE110092.231ENSPANG00000018873CSDE110091.917Papio_anubis
ENSGAGG00000017685CSDE110075.469ENSPKIG00000009459csde110078.516Paramormyrops_kingsleyae
ENSGAGG00000017685CSDE19698.667ENSPSIG00000003823CSDE19698.667Pelodiscus_sinensis
ENSGAGG00000017685CSDE110075.625ENSPMGG00000000772csde110078.674Periophthalmus_magnuspinnatus
ENSGAGG00000017685CSDE110091.729ENSPEMG00000020357-10091.729Peromyscus_maniculatus_bairdii
ENSGAGG00000017685CSDE110093.985ENSPCIG00000022587CSDE110093.985Phascolarctos_cinereus
ENSGAGG00000017685CSDE19978.106ENSPFOG00000012664csde110078.571Poecilia_formosa
ENSGAGG00000017685CSDE19773.773ENSPLAG00000017680csde19373.773Poecilia_latipinna
ENSGAGG00000017685CSDE19873.445ENSPMEG00000005094csde19673.445Poecilia_mexicana
ENSGAGG00000017685CSDE110078.385ENSPREG00000011631csde110076.110Poecilia_reticulata
ENSGAGG00000017685CSDE110092.105ENSPPYG00000000996CSDE110092.105Pongo_abelii
ENSGAGG00000017685CSDE110098.058ENSPCAG00000014368CSDE19098.058Procavia_capensis
ENSGAGG00000017685CSDE19080.970ENSPCOG00000008223-9080.970Propithecus_coquereli
ENSGAGG00000017685CSDE110091.980ENSPCOG00000017893CSDE110091.980Propithecus_coquereli
ENSGAGG00000017685CSDE110085.012ENSPVAG00000008225CSDE110084.398Pteropus_vampyrus
ENSGAGG00000017685CSDE110078.234ENSPNYG00000013745csde110079.454Pundamilia_nyererei
ENSGAGG00000017685CSDE110078.277ENSPNAG00000001958csde110078.571Pygocentrus_nattereri
ENSGAGG00000017685CSDE110091.479ENSRNOG00000061058Csde110091.479Rattus_norvegicus
ENSGAGG00000017685CSDE110086.859ENSRBIG00000038966-10085.579Rhinopithecus_bieti
ENSGAGG00000017685CSDE110088.847ENSRBIG00000038088-10088.672Rhinopithecus_bieti
ENSGAGG00000017685CSDE110092.231ENSRROG00000043101CSDE110090.651Rhinopithecus_roxellana
ENSGAGG00000017685CSDE110092.356ENSSBOG00000035592CSDE110090.769Saimiri_boliviensis_boliviensis
ENSGAGG00000017685CSDE110092.525ENSSHAG00000009831CSDE110093.611Sarcophilus_harrisii
ENSGAGG00000017685CSDE110078.483ENSSFOG00015007498csde110079.351Scleropages_formosus
ENSGAGG00000017685CSDE110077.411ENSSMAG00000007203csde110079.844Scophthalmus_maximus
ENSGAGG00000017685CSDE110077.534ENSSDUG00000015380csde110079.844Seriola_dumerili
ENSGAGG00000017685CSDE110079.375ENSSLDG00000008819csde110079.844Seriola_lalandi_dorsalis
ENSGAGG00000017685CSDE110088.346ENSSARG00000000738CSDE110089.435Sorex_araneus
ENSGAGG00000017685CSDE110096.482ENSSPUG00000008714CSDE110096.482Sphenodon_punctatus
ENSGAGG00000017685CSDE110079.875ENSSPAG00000000716csde110080.364Stegastes_partitus
ENSGAGG00000017685CSDE110092.231ENSSSCG00000006752CSDE110091.917Sus_scrofa
ENSGAGG00000017685CSDE110094.361ENSTGUG00000000972CSDE110094.361Taeniopygia_guttata
ENSGAGG00000017685CSDE110074.185ENSTRUG00000007996csde110077.184Takifugu_rubripes
ENSGAGG00000017685CSDE19382.890ENSTNIG00000010878csde110082.890Tetraodon_nigroviridis
ENSGAGG00000017685CSDE19397.436ENSTBEG00000011880-6697.436Tupaia_belangeri
ENSGAGG00000017685CSDE110090.295ENSTTRG00000015583CSDE110089.803Tursiops_truncatus
ENSGAGG00000017685CSDE18695.380ENSUAMG00000021779-9995.114Ursus_americanus
ENSGAGG00000017685CSDE19082.515ENSUAMG00000024289-9986.634Ursus_americanus
ENSGAGG00000017685CSDE19787.886ENSUMAG00000011714-9987.886Ursus_maritimus
ENSGAGG00000017685CSDE110081.328ENSUMAG00000009720-9884.306Ursus_maritimus
ENSGAGG00000017685CSDE110092.019ENSVPAG00000000749CSDE18592.019Vicugna_pacos
ENSGAGG00000017685CSDE19091.520ENSVVUG00000009890CSDE19491.520Vulpes_vulpes
ENSGAGG00000017685CSDE110087.141ENSXETG00000021448csde110087.141Xenopus_tropicalis
ENSGAGG00000017685CSDE19287.273ENSXCOG00000000035csde18587.273Xiphophorus_couchianus
ENSGAGG00000017685CSDE110079.375ENSXMAG00000009080csde19879.735Xiphophorus_maculatus

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