EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000017727 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 5943 bases
Position: chrPPEB01004606.1:46371-52313
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000024250	Nop25	PF09805.9	3.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000027606	-	1617	-	ENSGAGP00000024250	211 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017727	-	97	66.190	ENSG00000273899	NOL12	97	65.238	Homo_sapiens
ENSGAGG00000017727	-	92	50.244	ENSAPOG00000006332	nol12	88	49.756	Acanthochromis_polyacanthus
ENSGAGG00000017727	-	96	65.854	ENSAMEG00000010139	-	97	64.878	Ailuropoda_melanoleuca
ENSGAGG00000017727	-	92	51.691	ENSACIG00000000239	nol12	89	52.133	Amphilophus_citrinellus
ENSGAGG00000017727	-	92	49.515	ENSAOCG00000004207	nol12	88	49.524	Amphiprion_ocellaris
ENSGAGG00000017727	-	92	49.515	ENSAPEG00000013488	nol12	88	49.524	Amphiprion_percula
ENSGAGG00000017727	-	92	52.427	ENSATEG00000009548	nol12	88	52.427	Anabas_testudineus
ENSGAGG00000017727	-	100	66.981	ENSACAG00000015549	-	100	66.981	Anolis_carolinensis
ENSGAGG00000017727	-	96	63.107	ENSANAG00000025653	-	95	63.107	Aotus_nancymaae
ENSGAGG00000017727	-	92	50.476	ENSACLG00000016476	nol12	89	51.905	Astatotilapia_calliptera
ENSGAGG00000017727	-	70	60.927	ENSAMXG00000041317	nol12	94	49.780	Astyanax_mexicanus
ENSGAGG00000017727	-	91	66.667	ENSBTAG00000051118	NOL12	95	68.108	Bos_taurus
ENSGAGG00000017727	-	97	63.158	ENSCJAG00000012487	-	97	62.201	Callithrix_jacchus
ENSGAGG00000017727	-	97	60.476	ENSCJAG00000005559	-	94	60.476	Callithrix_jacchus
ENSGAGG00000017727	-	97	65.714	ENSCAFG00000028770	-	97	64.762	Canis_familiaris
ENSGAGG00000017727	-	97	65.714	ENSCAFG00020003735	-	97	64.762	Canis_lupus_dingo
ENSGAGG00000017727	-	97	67.143	ENSCHIG00000021736	-	97	65.238	Capra_hircus
ENSGAGG00000017727	-	97	51.208	ENSTSYG00000036100	-	97	51.208	Carlito_syrichta
ENSGAGG00000017727	-	97	63.810	ENSTSYG00000008865	-	97	62.857	Carlito_syrichta
ENSGAGG00000017727	-	97	51.208	ENSTSYG00000027029	-	97	51.208	Carlito_syrichta
ENSGAGG00000017727	-	97	63.810	ENSCPOG00000037340	-	97	63.033	Cavia_porcellus
ENSGAGG00000017727	-	97	63.285	ENSCCAG00000034277	-	97	63.285	Cebus_capucinus
ENSGAGG00000017727	-	97	65.217	ENSCCAG00000033458	-	97	65.217	Cebus_capucinus
ENSGAGG00000017727	-	89	69.312	ENSCATG00000038470	-	97	64.286	Cercocebus_atys
ENSGAGG00000017727	-	97	64.115	ENSCLAG00000016784	-	97	63.158	Chinchilla_lanigera
ENSGAGG00000017727	-	97	65.238	ENSCSAG00000007256	-	97	63.333	Chlorocebus_sabaeus
ENSGAGG00000017727	-	100	94.787	ENSCPBG00000023060	-	100	94.787	Chrysemys_picta_bellii
ENSGAGG00000017727	-	97	66.507	ENSCANG00000027973	-	97	65.072	Colobus_angolensis_palliatus
ENSGAGG00000017727	-	97	63.981	ENSCGRG00001016078	Nol12	97	63.981	Cricetulus_griseus_chok1gshd
ENSGAGG00000017727	-	97	63.981	ENSCGRG00000007664	Nol12	97	63.981	Cricetulus_griseus_crigri
ENSGAGG00000017727	-	78	52.096	ENSCSEG00000007082	nol12	88	47.549	Cynoglossus_semilaevis
ENSGAGG00000017727	-	91	51.500	ENSCVAG00000004424	nol12	86	52.500	Cyprinodon_variegatus
ENSGAGG00000017727	-	93	51.429	ENSDARG00000038027	nol12	95	49.550	Danio_rerio
ENSGAGG00000017727	-	97	50.000	ENSDNOG00000007681	-	92	49.289	Dasypus_novemcinctus
ENSGAGG00000017727	-	97	59.330	ENSETEG00000008089	-	97	58.373	Echinops_telfairi
ENSGAGG00000017727	-	70	41.667	ENSEBUG00000008264	nol12	87	39.706	Eptatretus_burgeri
ENSGAGG00000017727	-	97	67.773	ENSEASG00005018821	-	97	65.877	Equus_asinus_asinus
ENSGAGG00000017727	-	97	66.825	ENSECAG00000032748	NOL12	97	64.929	Equus_caballus
ENSGAGG00000017727	-	97	66.505	ENSEEUG00000002597	-	97	65.049	Erinaceus_europaeus
ENSGAGG00000017727	-	98	50.450	ENSELUG00000008885	nol12	92	51.351	Esox_lucius
ENSGAGG00000017727	-	91	67.010	ENSFCAG00000038953	-	97	63.810	Felis_catus
ENSGAGG00000017727	-	99	66.820	ENSFALG00000012807	-	92	66.820	Ficedula_albicollis
ENSGAGG00000017727	-	97	62.679	ENSFDAG00000000919	-	97	62.679	Fukomys_damarensis
ENSGAGG00000017727	-	91	49.751	ENSFHEG00000005900	nol12	87	49.751	Fundulus_heteroclitus
ENSGAGG00000017727	-	92	48.276	ENSGMOG00000006313	nol12	87	47.291	Gadus_morhua
ENSGAGG00000017727	-	100	71.963	ENSGALG00000012410	-	100	71.963	Gallus_gallus
ENSGAGG00000017727	-	91	47.030	ENSGAFG00000017520	nol12	86	50.244	Gambusia_affinis
ENSGAGG00000017727	-	90	48.990	ENSGACG00000007246	nol12	85	48.990	Gasterosteus_aculeatus
ENSGAGG00000017727	-	97	66.667	ENSGGOG00000040937	-	94	68.681	Gorilla_gorilla
ENSGAGG00000017727	-	92	50.476	ENSHBUG00000021873	nol12	89	51.905	Haplochromis_burtoni
ENSGAGG00000017727	-	91	61.224	ENSHGLG00000015482	-	97	60.664	Heterocephalus_glaber_female
ENSGAGG00000017727	-	91	61.224	ENSHGLG00100003937	-	97	60.664	Heterocephalus_glaber_male
ENSGAGG00000017727	-	93	50.962	ENSHCOG00000005941	nol12	89	50.467	Hippocampus_comes
ENSGAGG00000017727	-	100	50.000	ENSIPUG00000000672	nol12	100	49.573	Ictalurus_punctatus
ENSGAGG00000017727	-	97	65.877	ENSSTOG00000028960	-	97	64.455	Ictidomys_tridecemlineatus
ENSGAGG00000017727	-	93	52.709	ENSKMAG00000014033	nol12	89	53.695	Kryptolebias_marmoratus
ENSGAGG00000017727	-	97	58.373	ENSLACG00000005267	-	97	59.809	Latimeria_chalumnae
ENSGAGG00000017727	-	97	64.904	ENSLAFG00000010072	-	97	64.904	Loxodonta_africana
ENSGAGG00000017727	-	89	69.841	ENSMFAG00000006832	-	97	64.286	Macaca_fascicularis
ENSGAGG00000017727	-	89	69.312	ENSMMUG00000047489	NOL12	97	63.810	Macaca_mulatta
ENSGAGG00000017727	-	89	69.841	ENSMNEG00000016463	-	97	64.286	Macaca_nemestrina
ENSGAGG00000017727	-	92	51.942	ENSMAMG00000008197	nol12	88	52.381	Mastacembelus_armatus
ENSGAGG00000017727	-	92	50.952	ENSMZEG00005005326	nol12	89	52.381	Maylandia_zebra
ENSGAGG00000017727	-	94	71.429	ENSMGAG00000012548	-	100	70.642	Meleagris_gallopavo
ENSGAGG00000017727	-	97	64.455	ENSMAUG00000020440	Nol12	97	63.507	Mesocricetus_auratus
ENSGAGG00000017727	-	97	64.734	ENSMICG00000033461	-	97	64.734	Microcebus_murinus
ENSGAGG00000017727	-	97	64.423	ENSMOCG00000021388	Nol12	97	62.981	Microtus_ochrogaster
ENSGAGG00000017727	-	92	52.451	ENSMMOG00000005012	nol12	88	52.657	Mola_mola
ENSGAGG00000017727	-	97	60.648	ENSMODG00000000273	-	99	57.207	Monodelphis_domestica
ENSGAGG00000017727	-	100	51.111	ENSMALG00000001721	nol12	95	50.218	Monopterus_albus
ENSGAGG00000017727	-	93	66.000	MGP_CAROLIEiJ_G0019998	Nol12	99	61.751	Mus_caroli
ENSGAGG00000017727	-	93	66.000	ENSMUSG00000033099	Nol12	99	61.751	Mus_musculus
ENSGAGG00000017727	-	99	63.889	MGP_PahariEiJ_G0020000	Nol12	99	62.037	Mus_pahari
ENSGAGG00000017727	-	99	63.426	MGP_SPRETEiJ_G0020896	Nol12	99	61.574	Mus_spretus
ENSGAGG00000017727	-	97	64.115	ENSMPUG00000012830	-	97	64.115	Mustela_putorius_furo
ENSGAGG00000017727	-	97	65.714	ENSMLUG00000014280	-	97	64.286	Myotis_lucifugus
ENSGAGG00000017727	-	93	50.725	ENSNBRG00000002104	nol12	89	51.185	Neolamprologus_brichardi
ENSGAGG00000017727	-	97	49.761	ENSNLEG00000014859	-	97	49.519	Nomascus_leucogenys
ENSGAGG00000017727	-	85	63.333	ENSMEUG00000000228	-	96	63.333	Notamacropus_eugenii
ENSGAGG00000017727	-	73	61.635	ENSOPRG00000013360	-	100	60.625	Ochotona_princeps
ENSGAGG00000017727	-	87	63.102	ENSODEG00000000101	-	95	62.703	Octodon_degus
ENSGAGG00000017727	-	92	51.429	ENSONIG00000008373	nol12	89	52.857	Oreochromis_niloticus
ENSGAGG00000017727	-	86	73.224	ENSOANG00000005801	-	97	73.224	Ornithorhynchus_anatinus
ENSGAGG00000017727	-	97	61.611	ENSOCUG00000017013	-	97	60.664	Oryctolagus_cuniculus
ENSGAGG00000017727	-	93	48.544	ENSORLG00000014684	nol12	88	51.196	Oryzias_latipes
ENSGAGG00000017727	-	93	49.510	ENSORLG00020006235	nol12	88	51.196	Oryzias_latipes_hni
ENSGAGG00000017727	-	92	49.038	ENSORLG00015018366	nol12	88	51.675	Oryzias_latipes_hsok
ENSGAGG00000017727	-	93	50.000	ENSOMEG00000006905	nol12	88	51.174	Oryzias_melastigma
ENSGAGG00000017727	-	97	65.094	ENSOGAG00000008255	-	97	62.736	Otolemur_garnettii
ENSGAGG00000017727	-	97	66.667	ENSOARG00000013969	-	97	64.762	Ovis_aries
ENSGAGG00000017727	-	97	65.714	ENSPPAG00000032357	-	97	64.762	Pan_paniscus
ENSGAGG00000017727	-	97	65.238	ENSPPRG00000024913	-	97	64.286	Panthera_pardus
ENSGAGG00000017727	-	97	65.714	ENSPTIG00000012596	-	97	64.286	Panthera_tigris_altaica
ENSGAGG00000017727	-	97	65.238	ENSPTRG00000014345	NOL12	97	64.286	Pan_troglodytes
ENSGAGG00000017727	-	97	66.507	ENSPANG00000033918	-	97	64.593	Papio_anubis
ENSGAGG00000017727	-	92	54.808	ENSPKIG00000007375	nol12	100	51.982	Paramormyrops_kingsleyae
ENSGAGG00000017727	-	93	86.802	ENSPSIG00000012103	-	99	87.264	Pelodiscus_sinensis
ENSGAGG00000017727	-	66	56.643	ENSPMGG00000009583	nol12	84	53.158	Periophthalmus_magnuspinnatus
ENSGAGG00000017727	-	91	66.667	ENSPEMG00000010657	Nol12	97	62.911	Peromyscus_maniculatus_bairdii
ENSGAGG00000017727	-	91	49.519	ENSPFOG00000022176	nol12	86	50.472	Poecilia_formosa
ENSGAGG00000017727	-	93	50.000	ENSPLAG00000023807	nol12	86	52.174	Poecilia_latipinna
ENSGAGG00000017727	-	91	48.293	ENSPMEG00000018335	nol12	86	50.472	Poecilia_mexicana
ENSGAGG00000017727	-	97	66.507	ENSPCAG00000000561	-	97	66.507	Procavia_capensis
ENSGAGG00000017727	-	97	66.346	ENSPCOG00000014514	-	97	65.217	Propithecus_coquereli
ENSGAGG00000017727	-	100	64.352	ENSPVAG00000010097	-	100	62.963	Pteropus_vampyrus
ENSGAGG00000017727	-	92	50.476	ENSPNYG00000020267	nol12	89	51.905	Pundamilia_nyererei
ENSGAGG00000017727	-	65	57.746	ENSPNAG00000023112	nol12	89	51.429	Pygocentrus_nattereri
ENSGAGG00000017727	-	99	63.889	ENSRNOG00000010209	Nol12	99	62.037	Rattus_norvegicus
ENSGAGG00000017727	-	89	69.841	ENSRBIG00000042117	-	97	64.762	Rhinopithecus_bieti
ENSGAGG00000017727	-	89	69.841	ENSRROG00000037912	-	97	64.762	Rhinopithecus_roxellana
ENSGAGG00000017727	-	97	65.072	ENSSBOG00000036236	-	97	63.462	Saimiri_boliviensis_boliviensis
ENSGAGG00000017727	-	92	53.140	ENSSFOG00015012468	nol12	96	52.074	Scleropages_formosus
ENSGAGG00000017727	-	92	47.847	ENSSMAG00000004745	nol12	88	50.239	Scophthalmus_maximus
ENSGAGG00000017727	-	92	52.174	ENSSDUG00000016769	nol12	88	53.140	Seriola_dumerili
ENSGAGG00000017727	-	92	52.427	ENSSLDG00000024826	nol12	88	52.913	Seriola_lalandi_dorsalis
ENSGAGG00000017727	-	100	73.460	ENSSPUG00000011564	-	100	73.460	Sphenodon_punctatus
ENSGAGG00000017727	-	92	50.000	ENSSPAG00000007292	nol12	88	50.481	Stegastes_partitus
ENSGAGG00000017727	-	97	65.714	ENSSSCG00000021663	-	97	64.286	Sus_scrofa
ENSGAGG00000017727	-	100	70.370	ENSTGUG00000010526	NOL12	97	70.833	Taeniopygia_guttata
ENSGAGG00000017727	-	100	50.000	ENSTRUG00000019689	nol12	97	51.802	Takifugu_rubripes
ENSGAGG00000017727	-	98	51.802	ENSTNIG00000010836	nol12	89	53.670	Tetraodon_nigroviridis
ENSGAGG00000017727	-	100	59.259	ENSTBEG00000009745	-	100	57.407	Tupaia_belangeri
ENSGAGG00000017727	-	91	59.794	ENSTTRG00000004799	-	94	58.247	Tursiops_truncatus
ENSGAGG00000017727	-	99	65.421	ENSUAMG00000020483	-	99	64.019	Ursus_americanus
ENSGAGG00000017727	-	99	64.953	ENSUMAG00000015210	-	99	63.551	Ursus_maritimus
ENSGAGG00000017727	-	97	66.029	ENSVVUG00000023997	-	97	65.072	Vulpes_vulpes
ENSGAGG00000017727	-	100	51.402	ENSXETG00000015984	nol12	100	51.402	Xenopus_tropicalis
ENSGAGG00000017727	-	91	50.000	ENSXCOG00000015936	nol12	85	52.195	Xiphophorus_couchianus
ENSGAGG00000017727	-	91	49.000	ENSXMAG00000006120	nol12	85	51.208	Xiphophorus_maculatus