EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000017797 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 120749 bases
Position: chrPPEB01004295.1:3860-124608
Accession: 29167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000024391	R3H	PF01424.22	2e-10	1	1
ENSGAGP00000024401	R3H	PF01424.22	2e-10	1	1
ENSGAGP00000024384	R3H	PF01424.22	2.3e-10	1	1
ENSGAGP00000024379	R3H	PF01424.22	2.3e-10	1	1
ENSGAGP00000024365	R3H	PF01424.22	2.3e-10	1	1
ENSGAGP00000024357	R3H	PF01424.22	2.3e-10	1	1
ENSGAGP00000024372	R3H	PF01424.22	2.4e-10	1	1
ENSGAGP00000024405	R3H	PF01424.22	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000027748	R3HDM2-204	4431	-	ENSGAGP00000024379	1069 (aa)	-	-
ENSGAGT00000027741	R3HDM2-203	3535	-	ENSGAGP00000024372	1010 (aa)	-	-
ENSGAGT00000027753	R3HDM2-205	4287	-	ENSGAGP00000024384	1021 (aa)	-	-
ENSGAGT00000027777	R3HDM2-208	3979	-	ENSGAGP00000024405	1098 (aa)	-	-
ENSGAGT00000027772	R3HDM2-207	4117	-	ENSGAGP00000024401	983 (aa)	-	-
ENSGAGT00000027761	R3HDM2-206	4117	-	ENSGAGP00000024391	983 (aa)	-	-
ENSGAGT00000027725	R3HDM2-201	3464	-	ENSGAGP00000024357	1028 (aa)	-	-
ENSGAGT00000027734	R3HDM2-202	3662	-	ENSGAGP00000024365	1083 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000017797	R3HDM2	96	59.950	ENSGAGG00000007840	R3HDM1	79	69.966
ENSGAGG00000017797	R3HDM2	66	57.389	ENSGAGG00000021582	ARPP21	83	58.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017797	R3HDM2	100	80.607	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSGAGG00000017797	R3HDM2	52	39.261	ENSAPOG00000021873	-	76	42.473	Acanthochromis_polyacanthus
ENSGAGG00000017797	R3HDM2	99	61.740	ENSAPOG00000020341	r3hdm2	95	65.038	Acanthochromis_polyacanthus
ENSGAGG00000017797	R3HDM2	99	79.851	ENSAMEG00000004812	R3HDM2	100	80.037	Ailuropoda_melanoleuca
ENSGAGG00000017797	R3HDM2	93	62.423	ENSACIG00000016146	r3hdm2	98	62.769	Amphilophus_citrinellus
ENSGAGG00000017797	R3HDM2	52	41.026	ENSAOCG00000003840	-	78	42.361	Amphiprion_ocellaris
ENSGAGG00000017797	R3HDM2	99	61.822	ENSAOCG00000023694	r3hdm2	95	64.944	Amphiprion_ocellaris
ENSGAGG00000017797	R3HDM2	52	40.855	ENSAPEG00000014325	-	78	42.188	Amphiprion_percula
ENSGAGG00000017797	R3HDM2	99	61.632	ENSAPEG00000008851	r3hdm2	100	63.028	Amphiprion_percula
ENSGAGG00000017797	R3HDM2	99	60.841	ENSATEG00000025024	r3hdm2	100	65.784	Anabas_testudineus
ENSGAGG00000017797	R3HDM2	100	83.839	ENSACAG00000006388	R3HDM2	100	84.133	Anolis_carolinensis
ENSGAGG00000017797	R3HDM2	98	76.877	ENSANAG00000031310	-	100	76.777	Aotus_nancymaae
ENSGAGG00000017797	R3HDM2	100	80.392	ENSANAG00000025397	-	100	80.490	Aotus_nancymaae
ENSGAGG00000017797	R3HDM2	99	62.327	ENSACLG00000019106	r3hdm2	95	65.569	Astatotilapia_calliptera
ENSGAGG00000017797	R3HDM2	94	57.746	ENSAMXG00000017180	r3hdm2	99	58.835	Astyanax_mexicanus
ENSGAGG00000017797	R3HDM2	100	80.392	ENSBTAG00000018361	R3HDM2	100	80.490	Bos_taurus
ENSGAGG00000017797	R3HDM2	100	80.864	ENSCJAG00000007365	R3HDM2	100	80.667	Callithrix_jacchus
ENSGAGG00000017797	R3HDM2	100	80.293	ENSCAFG00000000215	R3HDM2	100	80.488	Canis_familiaris
ENSGAGG00000017797	R3HDM2	100	80.509	ENSCAFG00020023713	R3HDM2	100	80.705	Canis_lupus_dingo
ENSGAGG00000017797	R3HDM2	100	80.686	ENSCHIG00000014022	R3HDM2	100	80.784	Capra_hircus
ENSGAGG00000017797	R3HDM2	100	79.142	ENSTSYG00000001449	R3HDM2	100	79.086	Carlito_syrichta
ENSGAGG00000017797	R3HDM2	100	79.470	ENSCPOG00000009217	R3HDM2	100	78.958	Cavia_porcellus
ENSGAGG00000017797	R3HDM2	89	80.310	ENSCCAG00000026083	R3HDM2	100	80.310	Cebus_capucinus
ENSGAGG00000017797	R3HDM2	100	80.705	ENSCATG00000036929	R3HDM2	100	80.607	Cercocebus_atys
ENSGAGG00000017797	R3HDM2	100	79.785	ENSCLAG00000011997	R3HDM2	100	79.785	Chinchilla_lanigera
ENSGAGG00000017797	R3HDM2	99	79.201	ENSCSAG00000004911	R3HDM2	100	79.109	Chlorocebus_sabaeus
ENSGAGG00000017797	R3HDM2	75	80.639	ENSCHOG00000005636	R3HDM2	91	80.838	Choloepus_hoffmanni
ENSGAGG00000017797	R3HDM2	100	96.595	ENSCPBG00000013922	R3HDM2	100	96.692	Chrysemys_picta_bellii
ENSGAGG00000017797	R3HDM2	100	80.864	ENSCANG00000043807	R3HDM2	100	80.765	Colobus_angolensis_palliatus
ENSGAGG00000017797	R3HDM2	100	79.334	ENSCGRG00001017324	R3hdm2	100	79.040	Cricetulus_griseus_chok1gshd
ENSGAGG00000017797	R3HDM2	99	78.938	ENSCGRG00000003862	R3hdm2	100	78.658	Cricetulus_griseus_crigri
ENSGAGG00000017797	R3HDM2	96	64.066	ENSCSEG00000010925	r3hdm2	100	63.204	Cynoglossus_semilaevis
ENSGAGG00000017797	R3HDM2	58	34.940	ENSCVAG00000007202	-	77	38.324	Cyprinodon_variegatus
ENSGAGG00000017797	R3HDM2	99	61.660	ENSCVAG00000009058	r3hdm2	100	60.928	Cyprinodon_variegatus
ENSGAGG00000017797	R3HDM2	93	61.435	ENSDARG00000102610	r3hdm2	99	62.409	Danio_rerio
ENSGAGG00000017797	R3HDM2	100	77.068	ENSDNOG00000015033	R3HDM2	100	78.541	Dasypus_novemcinctus
ENSGAGG00000017797	R3HDM2	95	76.758	ENSDORG00000011462	R3hdm2	99	76.758	Dipodomys_ordii
ENSGAGG00000017797	R3HDM2	100	79.961	ENSEASG00005007091	R3HDM2	100	80.372	Equus_asinus_asinus
ENSGAGG00000017797	R3HDM2	100	80.962	ENSECAG00000003157	R3HDM2	100	80.962	Equus_caballus
ENSGAGG00000017797	R3HDM2	97	61.828	ENSELUG00000015969	r3hdm2	100	60.195	Esox_lucius
ENSGAGG00000017797	R3HDM2	100	80.288	ENSFCAG00000000192	R3HDM2	99	80.455	Felis_catus
ENSGAGG00000017797	R3HDM2	88	76.134	ENSFALG00000000255	R3HDM2	100	76.890	Ficedula_albicollis
ENSGAGG00000017797	R3HDM2	100	79.045	ENSFDAG00000019385	R3HDM2	100	79.406	Fukomys_damarensis
ENSGAGG00000017797	R3HDM2	54	36.765	ENSFHEG00000007936	-	79	38.957	Fundulus_heteroclitus
ENSGAGG00000017797	R3HDM2	99	61.006	ENSFHEG00000016484	r3hdm2	95	64.400	Fundulus_heteroclitus
ENSGAGG00000017797	R3HDM2	94	63.016	ENSGMOG00000007961	r3hdm2	100	61.900	Gadus_morhua
ENSGAGG00000017797	R3HDM2	99	82.991	ENSGALG00000043736	R3HDM2	100	83.178	Gallus_gallus
ENSGAGG00000017797	R3HDM2	52	40.545	ENSGAFG00000015558	-	79	40.426	Gambusia_affinis
ENSGAGG00000017797	R3HDM2	99	62.657	ENSGAFG00000013887	r3hdm2	100	61.996	Gambusia_affinis
ENSGAGG00000017797	R3HDM2	94	65.197	ENSGACG00000006442	r3hdm2	100	65.676	Gasterosteus_aculeatus
ENSGAGG00000017797	R3HDM2	100	80.509	ENSGGOG00000015007	R3HDM2	100	80.411	Gorilla_gorilla
ENSGAGG00000017797	R3HDM2	89	71.916	ENSHGLG00000010421	-	97	71.476	Heterocephalus_glaber_female
ENSGAGG00000017797	R3HDM2	99	79.442	ENSHGLG00000010434	-	100	79.442	Heterocephalus_glaber_female
ENSGAGG00000017797	R3HDM2	100	79.277	ENSHGLG00100004183	-	100	79.349	Heterocephalus_glaber_male
ENSGAGG00000017797	R3HDM2	96	70.612	ENSHGLG00100018871	-	99	70.204	Heterocephalus_glaber_male
ENSGAGG00000017797	R3HDM2	99	60.441	ENSHCOG00000001142	r3hdm2	92	64.178	Hippocampus_comes
ENSGAGG00000017797	R3HDM2	98	59.459	ENSIPUG00000023873	r3hdm2	95	62.289	Ictalurus_punctatus
ENSGAGG00000017797	R3HDM2	100	76.758	ENSSTOG00000013424	R3HDM2	100	76.562	Ictidomys_tridecemlineatus
ENSGAGG00000017797	R3HDM2	99	80.504	ENSJJAG00000010001	R3hdm2	100	79.944	Jaculus_jaculus
ENSGAGG00000017797	R3HDM2	99	62.936	ENSKMAG00000012695	r3hdm2	99	65.535	Kryptolebias_marmoratus
ENSGAGG00000017797	R3HDM2	51	38.112	ENSKMAG00000004052	-	78	39.161	Kryptolebias_marmoratus
ENSGAGG00000017797	R3HDM2	99	61.696	ENSLBEG00000013115	r3hdm2	92	64.562	Labrus_bergylta
ENSGAGG00000017797	R3HDM2	54	39.638	ENSLBEG00000002779	-	83	41.503	Labrus_bergylta
ENSGAGG00000017797	R3HDM2	94	69.587	ENSLACG00000019064	r3hdm2	100	69.685	Latimeria_chalumnae
ENSGAGG00000017797	R3HDM2	100	67.464	ENSLOCG00000005976	r3hdm2	100	67.686	Lepisosteus_oculatus
ENSGAGG00000017797	R3HDM2	99	79.907	ENSLAFG00000006510	R3HDM2	100	79.721	Loxodonta_africana
ENSGAGG00000017797	R3HDM2	100	80.724	ENSMFAG00000036385	R3HDM2	100	80.626	Macaca_fascicularis
ENSGAGG00000017797	R3HDM2	100	80.724	ENSMMUG00000021789	R3HDM2	100	80.726	Macaca_mulatta
ENSGAGG00000017797	R3HDM2	100	80.645	ENSMNEG00000025314	R3HDM2	100	80.547	Macaca_nemestrina
ENSGAGG00000017797	R3HDM2	100	80.803	ENSMLEG00000028915	R3HDM2	100	80.705	Mandrillus_leucophaeus
ENSGAGG00000017797	R3HDM2	99	61.270	ENSMAMG00000009793	r3hdm2	95	64.601	Mastacembelus_armatus
ENSGAGG00000017797	R3HDM2	99	62.327	ENSMZEG00005007319	r3hdm2	95	65.569	Maylandia_zebra
ENSGAGG00000017797	R3HDM2	100	80.604	ENSMICG00000012389	R3HDM2	100	80.507	Microcebus_murinus
ENSGAGG00000017797	R3HDM2	100	79.588	ENSMOCG00000014425	R3hdm2	100	79.458	Microtus_ochrogaster
ENSGAGG00000017797	R3HDM2	95	62.731	ENSMMOG00000007448	r3hdm2	99	62.883	Mola_mola
ENSGAGG00000017797	R3HDM2	95	60.515	ENSMALG00000010211	r3hdm2	98	60.350	Monopterus_albus
ENSGAGG00000017797	R3HDM2	100	80.762	MGP_CAROLIEiJ_G0015896	R3hdm2	100	80.112	Mus_caroli
ENSGAGG00000017797	R3HDM2	100	81.036	ENSMUSG00000025404	R3hdm2	100	80.372	Mus_musculus
ENSGAGG00000017797	R3HDM2	100	81.373	MGP_PahariEiJ_G0031189	R3hdm2	100	81.157	Mus_pahari
ENSGAGG00000017797	R3HDM2	100	80.976	MGP_SPRETEiJ_G0016722	R3hdm2	100	80.316	Mus_spretus
ENSGAGG00000017797	R3HDM2	97	79.624	ENSMPUG00000001818	R3HDM2	99	78.500	Mustela_putorius_furo
ENSGAGG00000017797	R3HDM2	99	79.776	ENSMLUG00000004980	R3HDM2	100	79.590	Myotis_lucifugus
ENSGAGG00000017797	R3HDM2	100	80.569	ENSNGAG00000018800	R3hdm2	100	80.392	Nannospalax_galili
ENSGAGG00000017797	R3HDM2	94	62.322	ENSNBRG00000004483	r3hdm2	99	63.581	Neolamprologus_brichardi
ENSGAGG00000017797	R3HDM2	100	80.392	ENSNLEG00000017351	R3HDM2	100	80.490	Nomascus_leucogenys
ENSGAGG00000017797	R3HDM2	99	72.523	ENSMEUG00000008588	R3HDM2	100	72.430	Notamacropus_eugenii
ENSGAGG00000017797	R3HDM2	100	72.212	ENSOPRG00000013670	R3HDM2	100	72.019	Ochotona_princeps
ENSGAGG00000017797	R3HDM2	99	63.584	ENSONIG00000005075	r3hdm2	95	66.432	Oreochromis_niloticus
ENSGAGG00000017797	R3HDM2	99	79.333	ENSOCUG00000013258	R3HDM2	100	79.796	Oryctolagus_cuniculus
ENSGAGG00000017797	R3HDM2	99	61.923	ENSORLG00000005502	r3hdm2	99	63.101	Oryzias_latipes
ENSGAGG00000017797	R3HDM2	99	62.002	ENSORLG00020017069	r3hdm2	99	63.043	Oryzias_latipes_hni
ENSGAGG00000017797	R3HDM2	99	62.095	ENSORLG00015012735	r3hdm2	99	63.101	Oryzias_latipes_hsok
ENSGAGG00000017797	R3HDM2	51	37.205	ENSOMEG00000016256	-	75	38.121	Oryzias_melastigma
ENSGAGG00000017797	R3HDM2	99	57.824	ENSOMEG00000018079	r3hdm2	99	58.723	Oryzias_melastigma
ENSGAGG00000017797	R3HDM2	52	37.056	ENSOMEG00000009631	-	75	38.121	Oryzias_melastigma
ENSGAGG00000017797	R3HDM2	96	70.480	ENSOGAG00000027966	-	99	70.174	Otolemur_garnettii
ENSGAGG00000017797	R3HDM2	99	77.953	ENSOGAG00000012055	R3HDM2	100	77.860	Otolemur_garnettii
ENSGAGG00000017797	R3HDM2	100	80.626	ENSOARG00000006929	R3HDM2	100	80.528	Ovis_aries
ENSGAGG00000017797	R3HDM2	100	80.607	ENSPPAG00000034395	R3HDM2	100	80.509	Pan_paniscus
ENSGAGG00000017797	R3HDM2	100	80.235	ENSPPRG00000009240	R3HDM2	100	80.528	Panthera_pardus
ENSGAGG00000017797	R3HDM2	100	80.235	ENSPTIG00000008752	R3HDM2	100	80.528	Panthera_tigris_altaica
ENSGAGG00000017797	R3HDM2	100	80.528	ENSPTRG00000046457	R3HDM2	100	80.431	Pan_troglodytes
ENSGAGG00000017797	R3HDM2	98	79.362	ENSPANG00000024002	R3HDM2	100	79.163	Papio_anubis
ENSGAGG00000017797	R3HDM2	95	64.160	ENSPKIG00000003171	r3hdm2	96	64.421	Paramormyrops_kingsleyae
ENSGAGG00000017797	R3HDM2	66	76.339	ENSPSIG00000006954	R3HDM2	100	77.964	Pelodiscus_sinensis
ENSGAGG00000017797	R3HDM2	93	65.521	ENSPMGG00000007061	r3hdm2	99	66.181	Periophthalmus_magnuspinnatus
ENSGAGG00000017797	R3HDM2	100	79.568	ENSPEMG00000015964	R3hdm2	100	79.813	Peromyscus_maniculatus_bairdii
ENSGAGG00000017797	R3HDM2	100	79.804	ENSPCIG00000023841	R3HDM2	100	79.804	Phascolarctos_cinereus
ENSGAGG00000017797	R3HDM2	92	73.352	ENSPFOG00000006077	r3hdm2	99	56.450	Poecilia_formosa
ENSGAGG00000017797	R3HDM2	99	61.290	ENSPLAG00000002971	r3hdm2	99	61.771	Poecilia_latipinna
ENSGAGG00000017797	R3HDM2	99	61.290	ENSPMEG00000005330	r3hdm2	99	61.771	Poecilia_mexicana
ENSGAGG00000017797	R3HDM2	99	61.290	ENSPREG00000008424	r3hdm2	100	60.161	Poecilia_reticulata
ENSGAGG00000017797	R3HDM2	98	74.682	ENSPPYG00000004685	R3HDM2	81	74.585	Pongo_abelii
ENSGAGG00000017797	R3HDM2	87	91.336	ENSPCAG00000014642	R3HDM2	94	88.629	Procavia_capensis
ENSGAGG00000017797	R3HDM2	100	80.822	ENSPCOG00000013201	R3HDM2	100	80.822	Propithecus_coquereli
ENSGAGG00000017797	R3HDM2	99	80.299	ENSPVAG00000003967	R3HDM2	100	80.205	Pteropus_vampyrus
ENSGAGG00000017797	R3HDM2	94	61.179	ENSPNYG00000013479	r3hdm2	100	62.817	Pundamilia_nyererei
ENSGAGG00000017797	R3HDM2	99	61.740	ENSPNAG00000017473	r3hdm2	95	64.656	Pygocentrus_nattereri
ENSGAGG00000017797	R3HDM2	100	80.450	ENSRNOG00000007801	R3hdm2	100	79.628	Rattus_norvegicus
ENSGAGG00000017797	R3HDM2	100	78.137	ENSRBIG00000037403	R3HDM2	100	77.941	Rhinopithecus_bieti
ENSGAGG00000017797	R3HDM2	100	80.686	ENSRROG00000022271	R3HDM2	100	80.784	Rhinopithecus_roxellana
ENSGAGG00000017797	R3HDM2	100	80.765	ENSSBOG00000023547	R3HDM2	100	80.667	Saimiri_boliviensis_boliviensis
ENSGAGG00000017797	R3HDM2	99	78.099	ENSSHAG00000003511	R3HDM2	99	81.637	Sarcophilus_harrisii
ENSGAGG00000017797	R3HDM2	94	66.701	ENSSFOG00015011219	r3hdm2	99	66.494	Scleropages_formosus
ENSGAGG00000017797	R3HDM2	99	61.977	ENSSMAG00000012073	r3hdm2	100	63.228	Scophthalmus_maximus
ENSGAGG00000017797	R3HDM2	99	62.382	ENSSDUG00000019269	r3hdm2	100	61.803	Seriola_dumerili
ENSGAGG00000017797	R3HDM2	99	62.663	ENSSLDG00000005252	r3hdm2	100	62.030	Seriola_lalandi_dorsalis
ENSGAGG00000017797	R3HDM2	93	74.126	ENSSARG00000003958	R3HDM2	94	74.301	Sorex_araneus
ENSGAGG00000017797	R3HDM2	100	83.496	ENSSPUG00000014132	R3HDM2	100	83.691	Sphenodon_punctatus
ENSGAGG00000017797	R3HDM2	99	61.779	ENSSPAG00000022594	r3hdm2	100	63.169	Stegastes_partitus
ENSGAGG00000017797	R3HDM2	100	80.765	ENSSSCG00000026498	R3HDM2	100	80.765	Sus_scrofa
ENSGAGG00000017797	R3HDM2	73	80.253	ENSTGUG00000015881	R3HDM2	100	80.000	Taeniopygia_guttata
ENSGAGG00000017797	R3HDM2	95	61.361	ENSTRUG00000015075	r3hdm2	99	62.525	Takifugu_rubripes
ENSGAGG00000017797	R3HDM2	92	79.501	ENSTNIG00000007057	r3hdm2	92	79.501	Tetraodon_nigroviridis
ENSGAGG00000017797	R3HDM2	79	82.624	ENSTBEG00000015967	R3HDM2	81	82.624	Tupaia_belangeri
ENSGAGG00000017797	R3HDM2	93	80.920	ENSTTRG00000013082	R3HDM2	95	81.250	Tursiops_truncatus
ENSGAGG00000017797	R3HDM2	100	80.235	ENSUAMG00000020913	R3HDM2	100	79.050	Ursus_americanus
ENSGAGG00000017797	R3HDM2	100	75.586	ENSUMAG00000019179	R3HDM2	100	75.781	Ursus_maritimus
ENSGAGG00000017797	R3HDM2	95	89.489	ENSVPAG00000008656	R3HDM2	94	89.489	Vicugna_pacos
ENSGAGG00000017797	R3HDM2	97	80.571	ENSVVUG00000018014	R3HDM2	96	80.762	Vulpes_vulpes
ENSGAGG00000017797	R3HDM2	100	71.471	ENSXETG00000017153	r3hdm2	100	71.541	Xenopus_tropicalis
ENSGAGG00000017797	R3HDM2	87	59.630	ENSXCOG00000013882	r3hdm2	100	61.472	Xiphophorus_couchianus
ENSGAGG00000017797	R3HDM2	99	61.862	ENSXMAG00000017978	r3hdm2	100	61.472	Xiphophorus_maculatus