EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000017820 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 18719 bases
Position: chrPPEB01004617.1:54-18772
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000024403	RRM_1	PF00076.22	1.5e-09	1	1
ENSGAGP00000024402	RRM_1	PF00076.22	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000027774	-	2754	-	ENSGAGP00000024403	917 (aa)	-	-
ENSGAGT00000027773	-	2763	-	ENSGAGP00000024402	920 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017820's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017820	-	88	72.783	ENSG00000213079	SCAF8	63	72.783	Homo_sapiens
ENSGAGG00000017820	-	88	73.645	ENSAMEG00000007583	SCAF8	60	73.645	Ailuropoda_melanoleuca
ENSGAGG00000017820	-	65	62.671	ENSATEG00000006959	SCAF8	56	58.209	Anabas_testudineus
ENSGAGG00000017820	-	88	85.258	ENSAPLG00000005765	SCAF8	63	85.749	Anas_platyrhynchos
ENSGAGG00000017820	-	88	76.724	ENSACAG00000005282	SCAF8	63	76.724	Anolis_carolinensis
ENSGAGG00000017820	-	88	72.660	ENSANAG00000036184	SCAF8	63	72.660	Aotus_nancymaae
ENSGAGG00000017820	-	88	72.750	ENSBTAG00000031917	SCAF8	63	72.750	Bos_taurus
ENSGAGG00000017820	-	88	72.291	ENSCJAG00000012631	SCAF8	60	72.537	Callithrix_jacchus
ENSGAGG00000017820	-	88	73.892	ENSCAFG00000000570	SCAF8	63	73.892	Canis_familiaris
ENSGAGG00000017820	-	88	73.892	ENSCAFG00020015048	SCAF8	62	73.892	Canis_lupus_dingo
ENSGAGG00000017820	-	88	72.750	ENSCHIG00000025041	SCAF8	63	72.750	Capra_hircus
ENSGAGG00000017820	-	88	71.305	ENSTSYG00000010991	SCAF8	62	71.305	Carlito_syrichta
ENSGAGG00000017820	-	69	87.273	ENSCAPG00000003300	SCAF8	69	87.037	Cavia_aperea
ENSGAGG00000017820	-	88	65.686	ENSCPOG00000030311	-	65	66.010	Cavia_porcellus
ENSGAGG00000017820	-	88	72.660	ENSCPOG00000022216	-	66	72.167	Cavia_porcellus
ENSGAGG00000017820	-	88	72.537	ENSCCAG00000024952	SCAF8	63	72.537	Cebus_capucinus
ENSGAGG00000017820	-	88	72.537	ENSCATG00000035361	SCAF8	63	72.537	Cercocebus_atys
ENSGAGG00000017820	-	88	72.291	ENSCLAG00000004910	SCAF8	63	72.291	Chinchilla_lanigera
ENSGAGG00000017820	-	88	72.783	ENSCSAG00000013430	SCAF8	62	72.783	Chlorocebus_sabaeus
ENSGAGG00000017820	-	88	89.729	ENSCPBG00000016330	SCAF8	65	86.343	Chrysemys_picta_bellii
ENSGAGG00000017820	-	88	72.414	ENSCANG00000039499	SCAF8	63	72.414	Colobus_angolensis_palliatus
ENSGAGG00000017820	-	88	70.074	ENSCGRG00001020167	Scaf8	63	70.074	Cricetulus_griseus_chok1gshd
ENSGAGG00000017820	-	88	70.074	ENSCGRG00000004120	Scaf8	63	70.074	Cricetulus_griseus_crigri
ENSGAGG00000017820	-	88	73.243	ENSDNOG00000025271	SCAF8	66	73.243	Dasypus_novemcinctus
ENSGAGG00000017820	-	88	70.675	ENSDORG00000006391	Scaf8	63	70.920	Dipodomys_ordii
ENSGAGG00000017820	-	88	71.552	ENSEASG00005018879	SCAF8	63	71.798	Equus_asinus_asinus
ENSGAGG00000017820	-	88	71.798	ENSECAG00000005540	SCAF8	63	72.906	Equus_caballus
ENSGAGG00000017820	-	88	73.399	ENSFCAG00000023424	SCAF8	63	73.399	Felis_catus
ENSGAGG00000017820	-	88	84.360	ENSFALG00000012433	SCAF8	63	84.975	Ficedula_albicollis
ENSGAGG00000017820	-	88	72.202	ENSFDAG00000010335	SCAF8	63	72.202	Fukomys_damarensis
ENSGAGG00000017820	-	88	85.995	ENSGALG00000013635	SCAF8	62	85.995	Gallus_gallus
ENSGAGG00000017820	-	67	57.911	ENSGACG00000006909	SCAF8	51	62.774	Gasterosteus_aculeatus
ENSGAGG00000017820	-	88	72.783	ENSGGOG00000008645	SCAF8	63	72.783	Gorilla_gorilla
ENSGAGG00000017820	-	88	72.325	ENSHGLG00000003619	SCAF8	63	72.325	Heterocephalus_glaber_female
ENSGAGG00000017820	-	88	72.325	ENSHGLG00100004708	SCAF8	63	72.325	Heterocephalus_glaber_male
ENSGAGG00000017820	-	88	72.940	ENSSTOG00000026043	SCAF8	63	72.940	Ictidomys_tridecemlineatus
ENSGAGG00000017820	-	88	69.951	ENSJJAG00000020480	Scaf8	63	69.951	Jaculus_jaculus
ENSGAGG00000017820	-	71	64.345	ENSLACG00000001394	SCAF8	56	63.143	Latimeria_chalumnae
ENSGAGG00000017820	-	77	62.080	ENSLOCG00000016856	SCAF8	57	60.856	Lepisosteus_oculatus
ENSGAGG00000017820	-	88	70.849	ENSLAFG00000000022	SCAF8	63	71.744	Loxodonta_africana
ENSGAGG00000017820	-	88	72.783	ENSMFAG00000032738	SCAF8	64	72.783	Macaca_fascicularis
ENSGAGG00000017820	-	88	72.783	ENSMMUG00000015163	SCAF8	63	72.783	Macaca_mulatta
ENSGAGG00000017820	-	88	73.186	ENSMNEG00000043466	SCAF8	63	72.783	Macaca_nemestrina
ENSGAGG00000017820	-	88	72.537	ENSMLEG00000034845	SCAF8	63	72.537	Mandrillus_leucophaeus
ENSGAGG00000017820	-	88	85.330	ENSMGAG00000012762	SCAF8	64	85.330	Meleagris_gallopavo
ENSGAGG00000017820	-	88	69.335	ENSMAUG00000009513	Scaf8	63	69.335	Mesocricetus_auratus
ENSGAGG00000017820	-	88	73.342	ENSMICG00000028965	SCAF8	63	72.940	Microcebus_murinus
ENSGAGG00000017820	-	88	70.443	ENSMOCG00000014950	Scaf8	63	70.443	Microtus_ochrogaster
ENSGAGG00000017820	-	88	77.833	ENSMODG00000008301	SCAF8	63	77.586	Monodelphis_domestica
ENSGAGG00000017820	-	88	69.420	MGP_CAROLIEiJ_G0021016	Scaf8	63	69.420	Mus_caroli
ENSGAGG00000017820	-	88	69.297	ENSMUSG00000046201	Scaf8	63	69.297	Mus_musculus
ENSGAGG00000017820	-	88	69.667	MGP_PahariEiJ_G0023334	Scaf8	63	69.667	Mus_pahari
ENSGAGG00000017820	-	88	73.153	ENSMPUG00000001974	SCAF8	62	73.153	Mustela_putorius_furo
ENSGAGG00000017820	-	88	70.690	ENSMLUG00000029190	SCAF8	63	70.690	Myotis_lucifugus
ENSGAGG00000017820	-	88	70.567	ENSNGAG00000012332	Scaf8	63	70.567	Nannospalax_galili
ENSGAGG00000017820	-	82	50.000	ENSNBRG00000009067	SCAF8	54	59.044	Neolamprologus_brichardi
ENSGAGG00000017820	-	88	73.186	ENSNLEG00000015509	SCAF8	63	72.783	Nomascus_leucogenys
ENSGAGG00000017820	-	75	70.102	ENSOPRG00000018413	-	59	69.521	Ochotona_princeps
ENSGAGG00000017820	-	88	72.604	ENSODEG00000007296	SCAF8	63	72.604	Octodon_degus
ENSGAGG00000017820	-	76	59.306	ENSONIG00000008119	SCAF8	55	62.925	Oreochromis_niloticus
ENSGAGG00000017820	-	88	72.694	ENSOCUG00000026063	SCAF8	63	72.694	Oryctolagus_cuniculus
ENSGAGG00000017820	-	88	71.675	ENSOGAG00000034223	SCAF8	60	71.921	Otolemur_garnettii
ENSGAGG00000017820	-	88	72.750	ENSOARG00000004159	SCAF8	63	72.750	Ovis_aries
ENSGAGG00000017820	-	88	73.153	ENSPPAG00000039826	SCAF8	63	72.660	Pan_paniscus
ENSGAGG00000017820	-	88	73.153	ENSPPRG00000023175	SCAF8	63	73.153	Panthera_pardus
ENSGAGG00000017820	-	88	73.555	ENSPTIG00000014836	SCAF8	63	73.153	Panthera_tigris_altaica
ENSGAGG00000017820	-	88	72.660	ENSPTRG00000018727	SCAF8	63	72.660	Pan_troglodytes
ENSGAGG00000017820	-	88	72.537	ENSPANG00000017489	SCAF8	64	72.291	Papio_anubis
ENSGAGG00000017820	-	88	93.089	ENSPSIG00000008614	SCAF8	72	93.089	Pelodiscus_sinensis
ENSGAGG00000017820	-	88	70.197	ENSPEMG00000010531	Scaf8	63	70.197	Peromyscus_maniculatus_bairdii
ENSGAGG00000017820	-	88	78.079	ENSPCIG00000001141	SCAF8	63	77.833	Phascolarctos_cinereus
ENSGAGG00000017820	-	74	63.265	ENSPFOG00000004176	SCAF8	52	63.265	Poecilia_formosa
ENSGAGG00000017820	-	88	72.783	ENSPPYG00000017121	SCAF8	63	72.291	Pongo_abelii
ENSGAGG00000017820	-	67	92.857	ENSPCAG00000013044	SCAF8	51	92.857	Procavia_capensis
ENSGAGG00000017820	-	88	72.973	ENSPCOG00000002067	SCAF8	63	72.571	Propithecus_coquereli
ENSGAGG00000017820	-	86	70.492	ENSPVAG00000005582	SCAF8	62	71.627	Pteropus_vampyrus
ENSGAGG00000017820	-	88	70.160	ENSRNOG00000016919	Scaf8	63	70.160	Rattus_norvegicus
ENSGAGG00000017820	-	88	72.906	ENSRBIG00000035769	SCAF8	63	72.414	Rhinopithecus_bieti
ENSGAGG00000017820	-	88	72.414	ENSRROG00000013580	SCAF8	63	72.414	Rhinopithecus_roxellana
ENSGAGG00000017820	-	88	72.167	ENSSBOG00000027023	SCAF8	63	72.660	Saimiri_boliviensis_boliviensis
ENSGAGG00000017820	-	88	77.956	ENSSHAG00000009915	SCAF8	63	77.709	Sarcophilus_harrisii
ENSGAGG00000017820	-	74	67.354	ENSSFOG00015009481	SCAF8	53	67.010	Scleropages_formosus
ENSGAGG00000017820	-	88	82.222	ENSSPUG00000015219	SCAF8	64	81.425	Sphenodon_punctatus
ENSGAGG00000017820	-	88	72.783	ENSSSCG00000004070	SCAF8	64	73.030	Sus_scrofa
ENSGAGG00000017820	-	88	85.345	ENSTGUG00000011151	SCAF8	64	84.606	Taeniopygia_guttata
ENSGAGG00000017820	-	64	59.396	ENSTNIG00000016885	SCAF8	57	59.864	Tetraodon_nigroviridis
ENSGAGG00000017820	-	88	73.030	ENSTTRG00000014538	SCAF8	63	72.660	Tursiops_truncatus
ENSGAGG00000017820	-	88	73.768	ENSUAMG00000024736	SCAF8	63	73.276	Ursus_americanus
ENSGAGG00000017820	-	88	73.399	ENSUMAG00000013404	SCAF8	64	73.399	Ursus_maritimus
ENSGAGG00000017820	-	88	73.645	ENSVVUG00000007532	SCAF8	66	73.645	Vulpes_vulpes
ENSGAGG00000017820	-	88	50.733	ENSXETG00000013132	scaf8	63	47.722	Xenopus_tropicalis