EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000017986 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 8736 bases
Position: chrPPEB01004898.1:12039-20774
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000024648	zf-C2H2	PF00096.26	1.8e-65	1	9
ENSGAGP00000024648	zf-C2H2	PF00096.26	1.8e-65	2	9
ENSGAGP00000024648	zf-C2H2	PF00096.26	1.8e-65	3	9
ENSGAGP00000024648	zf-C2H2	PF00096.26	1.8e-65	4	9
ENSGAGP00000024648	zf-C2H2	PF00096.26	1.8e-65	5	9
ENSGAGP00000024648	zf-C2H2	PF00096.26	1.8e-65	6	9
ENSGAGP00000024648	zf-C2H2	PF00096.26	1.8e-65	7	9
ENSGAGP00000024648	zf-C2H2	PF00096.26	1.8e-65	8	9
ENSGAGP00000024648	zf-C2H2	PF00096.26	1.8e-65	9	9
ENSGAGP00000024641	zf-C2H2	PF00096.26	3.9e-61	1	8
ENSGAGP00000024641	zf-C2H2	PF00096.26	3.9e-61	2	8
ENSGAGP00000024641	zf-C2H2	PF00096.26	3.9e-61	3	8
ENSGAGP00000024641	zf-C2H2	PF00096.26	3.9e-61	4	8
ENSGAGP00000024641	zf-C2H2	PF00096.26	3.9e-61	5	8
ENSGAGP00000024641	zf-C2H2	PF00096.26	3.9e-61	6	8
ENSGAGP00000024641	zf-C2H2	PF00096.26	3.9e-61	7	8
ENSGAGP00000024641	zf-C2H2	PF00096.26	3.9e-61	8	8
ENSGAGP00000024633	zf-C2H2	PF00096.26	9.7e-56	1	8
ENSGAGP00000024633	zf-C2H2	PF00096.26	9.7e-56	2	8
ENSGAGP00000024633	zf-C2H2	PF00096.26	9.7e-56	3	8
ENSGAGP00000024633	zf-C2H2	PF00096.26	9.7e-56	4	8
ENSGAGP00000024633	zf-C2H2	PF00096.26	9.7e-56	5	8
ENSGAGP00000024633	zf-C2H2	PF00096.26	9.7e-56	6	8
ENSGAGP00000024633	zf-C2H2	PF00096.26	9.7e-56	7	8
ENSGAGP00000024633	zf-C2H2	PF00096.26	9.7e-56	8	8
ENSGAGP00000024638	zf-C2H2	PF00096.26	7e-49	1	7
ENSGAGP00000024638	zf-C2H2	PF00096.26	7e-49	2	7
ENSGAGP00000024638	zf-C2H2	PF00096.26	7e-49	3	7
ENSGAGP00000024638	zf-C2H2	PF00096.26	7e-49	4	7
ENSGAGP00000024638	zf-C2H2	PF00096.26	7e-49	5	7
ENSGAGP00000024638	zf-C2H2	PF00096.26	7e-49	6	7
ENSGAGP00000024638	zf-C2H2	PF00096.26	7e-49	7	7
ENSGAGP00000024638	zf-met	PF12874.7	2.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000028036	-	900	-	ENSGAGP00000024638	299 (aa)	-	-
ENSGAGT00000028039	-	1146	-	ENSGAGP00000024641	381 (aa)	-	-
ENSGAGT00000028047	-	1107	-	ENSGAGP00000024648	368 (aa)	-	-
ENSGAGT00000028031	-	1179	-	ENSGAGP00000024633	392 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000017986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000017986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000017986	-	97	67.183	ENSGAGG00000006960	-	89	72.426
ENSGAGG00000017986	-	93	74.908	ENSGAGG00000010833	-	93	74.908
ENSGAGG00000017986	-	90	70.213	ENSGAGG00000015232	-	87	58.333
ENSGAGG00000017986	-	97	68.389	ENSGAGG00000014389	-	99	72.527
ENSGAGG00000017986	-	91	60.234	ENSGAGG00000006846	-	93	53.939
ENSGAGG00000017986	-	90	47.748	ENSGAGG00000021327	GFI1B	52	47.748
ENSGAGG00000017986	-	94	62.541	ENSGAGG00000001469	-	100	63.780
ENSGAGG00000017986	-	97	69.892	ENSGAGG00000019349	-	78	74.359
ENSGAGG00000017986	-	93	35.510	ENSGAGG00000020362	PRDM5	81	34.008
ENSGAGG00000017986	-	94	62.000	ENSGAGG00000020134	-	66	62.000
ENSGAGG00000017986	-	99	71.125	ENSGAGG00000020594	-	92	71.125
ENSGAGG00000017986	-	97	60.588	ENSGAGG00000010324	-	81	61.172
ENSGAGG00000017986	-	90	81.301	ENSGAGG00000006683	-	89	81.301
ENSGAGG00000017986	-	95	46.053	ENSGAGG00000003883	ZNF236	69	46.053
ENSGAGG00000017986	-	96	40.611	ENSGAGG00000003095	ZNF865	88	41.833
ENSGAGG00000017986	-	90	59.375	ENSGAGG00000017640	-	78	53.731
ENSGAGG00000017986	-	94	73.518	ENSGAGG00000009739	-	99	73.799
ENSGAGG00000017986	-	97	31.228	ENSGAGG00000022082	PRDM15	52	34.706
ENSGAGG00000017986	-	97	56.545	ENSGAGG00000006848	-	68	56.545
ENSGAGG00000017986	-	92	58.974	ENSGAGG00000005805	-	100	60.000
ENSGAGG00000017986	-	91	52.326	ENSGAGG00000017094	-	52	52.326
ENSGAGG00000017986	-	99	61.942	ENSGAGG00000013851	-	92	70.472
ENSGAGG00000017986	-	99	68.325	ENSGAGG00000014356	-	80	69.291
ENSGAGG00000017986	-	96	63.514	ENSGAGG00000002179	-	98	61.088
ENSGAGG00000017986	-	94	62.069	ENSGAGG00000011487	-	94	61.455
ENSGAGG00000017986	-	93	53.448	ENSGAGG00000018885	-	66	55.598
ENSGAGG00000017986	-	97	69.231	ENSGAGG00000012452	-	84	70.659
ENSGAGG00000017986	-	94	71.523	ENSGAGG00000008773	-	96	73.091
ENSGAGG00000017986	-	97	54.286	ENSGAGG00000011366	-	97	56.828
ENSGAGG00000017986	-	97	72.512	ENSGAGG00000007230	-	91	73.171
ENSGAGG00000017986	-	90	70.621	ENSGAGG00000016529	-	93	70.621
ENSGAGG00000017986	-	97	38.728	ENSGAGG00000022571	ZNF319	99	42.804
ENSGAGG00000017986	-	94	63.755	ENSGAGG00000006323	-	94	64.458
ENSGAGG00000017986	-	99	64.062	ENSGAGG00000001645	-	68	67.188
ENSGAGG00000017986	-	97	70.565	ENSGAGG00000004740	-	94	74.251
ENSGAGG00000017986	-	90	70.455	ENSGAGG00000011574	-	98	70.487
ENSGAGG00000017986	-	99	66.023	ENSGAGG00000000971	-	93	69.767
ENSGAGG00000017986	-	90	55.859	ENSGAGG00000018445	-	99	51.198
ENSGAGG00000017986	-	91	52.500	ENSGAGG00000004926	-	95	52.604
ENSGAGG00000017986	-	96	65.060	ENSGAGG00000002214	-	91	65.809
ENSGAGG00000017986	-	97	59.740	ENSGAGG00000001387	-	70	59.740
ENSGAGG00000017986	-	96	60.667	ENSGAGG00000002828	-	77	56.772
ENSGAGG00000017986	-	90	57.225	ENSGAGG00000020168	-	76	58.025
ENSGAGG00000017986	-	91	64.957	ENSGAGG00000005331	-	80	64.957
ENSGAGG00000017986	-	91	54.545	ENSGAGG00000013021	-	99	54.545
ENSGAGG00000017986	-	91	69.079	ENSGAGG00000010492	-	94	64.045
ENSGAGG00000017986	-	94	64.396	ENSGAGG00000015451	-	90	68.992
ENSGAGG00000017986	-	94	63.436	ENSGAGG00000009272	-	98	60.082
ENSGAGG00000017986	-	90	56.345	ENSGAGG00000011399	-	84	56.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000017986	-	94	50.758	ENSAPLG00000012660	-	81	53.704	Anas_platyrhynchos
ENSGAGG00000017986	-	92	54.148	ENSAMXG00000037326	-	96	54.148	Astyanax_mexicanus
ENSGAGG00000017986	-	90	59.391	ENSAMXG00000003002	-	96	60.902	Astyanax_mexicanus
ENSGAGG00000017986	-	90	58.744	ENSAMXG00000004610	-	98	59.292	Astyanax_mexicanus
ENSGAGG00000017986	-	90	64.706	ENSAMXG00000029878	-	95	65.116	Astyanax_mexicanus
ENSGAGG00000017986	-	91	66.839	ENSAMXG00000025455	-	99	66.839	Astyanax_mexicanus
ENSGAGG00000017986	-	98	62.857	ENSAMXG00000035690	-	82	62.857	Astyanax_mexicanus
ENSGAGG00000017986	-	90	59.873	ENSAMXG00000031489	-	91	60.630	Astyanax_mexicanus
ENSGAGG00000017986	-	96	59.146	ENSAMXG00000037143	-	95	59.146	Astyanax_mexicanus
ENSGAGG00000017986	-	94	56.563	ENSAMXG00000039752	-	97	56.563	Astyanax_mexicanus
ENSGAGG00000017986	-	96	58.065	ENSAMXG00000043978	-	89	55.422	Astyanax_mexicanus
ENSGAGG00000017986	-	95	59.459	ENSAMXG00000026142	-	90	61.255	Astyanax_mexicanus
ENSGAGG00000017986	-	98	54.237	ENSAMXG00000026144	-	98	54.237	Astyanax_mexicanus
ENSGAGG00000017986	-	91	54.450	ENSAMXG00000019489	-	96	53.889	Astyanax_mexicanus
ENSGAGG00000017986	-	93	60.563	ENSAMXG00000011804	-	91	58.845	Astyanax_mexicanus
ENSGAGG00000017986	-	95	54.790	ENSAMXG00000032619	-	97	58.233	Astyanax_mexicanus
ENSGAGG00000017986	-	97	56.765	ENSAMXG00000040212	-	94	58.515	Astyanax_mexicanus
ENSGAGG00000017986	-	90	63.810	ENSAMXG00000033124	-	70	54.074	Astyanax_mexicanus
ENSGAGG00000017986	-	90	51.786	ENSAMXG00000039881	-	57	51.176	Astyanax_mexicanus
ENSGAGG00000017986	-	90	64.050	ENSAMXG00000037703	-	86	64.407	Astyanax_mexicanus
ENSGAGG00000017986	-	96	59.144	ENSAMXG00000038453	-	93	59.144	Astyanax_mexicanus
ENSGAGG00000017986	-	97	62.057	ENSAMXG00000041725	-	95	62.057	Astyanax_mexicanus
ENSGAGG00000017986	-	94	58.784	ENSAMXG00000001626	-	96	58.784	Astyanax_mexicanus
ENSGAGG00000017986	-	94	59.091	ENSCPBG00000002014	-	64	56.442	Chrysemys_picta_bellii
ENSGAGG00000017986	-	97	64.062	ENSEASG00005020341	-	96	67.179	Equus_asinus_asinus
ENSGAGG00000017986	-	96	61.258	ENSECAG00000039445	-	92	65.185	Equus_caballus
ENSGAGG00000017986	-	97	64.062	ENSECAG00000017293	-	96	67.179	Equus_caballus
ENSGAGG00000017986	-	97	61.765	ENSIPUG00000015177	-	68	61.765	Ictalurus_punctatus
ENSGAGG00000017986	-	97	55.949	ENSIPUG00000015400	-	99	62.500	Ictalurus_punctatus
ENSGAGG00000017986	-	98	62.813	ENSMPUG00000008437	-	89	63.396	Mustela_putorius_furo
ENSGAGG00000017986	-	95	64.907	ENSPTIG00000009259	-	98	66.052	Panthera_tigris_altaica
ENSGAGG00000017986	-	90	58.798	ENSPSIG00000016247	-	56	60.251	Pelodiscus_sinensis
ENSGAGG00000017986	-	96	62.069	ENSPNAG00000017455	-	81	62.069	Pygocentrus_nattereri
ENSGAGG00000017986	-	90	64.035	ENSPNAG00000016025	-	96	62.009	Pygocentrus_nattereri
ENSGAGG00000017986	-	94	55.405	ENSPNAG00000000783	-	88	57.534	Pygocentrus_nattereri
ENSGAGG00000017986	-	97	56.845	ENSPNAG00000028765	-	91	59.041	Pygocentrus_nattereri
ENSGAGG00000017986	-	94	57.429	ENSPNAG00000017479	-	91	56.061	Pygocentrus_nattereri
ENSGAGG00000017986	-	90	64.685	ENSPNAG00000018471	-	82	65.085	Pygocentrus_nattereri
ENSGAGG00000017986	-	90	62.288	ENSPNAG00000018437	-	76	63.498	Pygocentrus_nattereri
ENSGAGG00000017986	-	90	56.818	ENSPNAG00000021942	-	92	57.203	Pygocentrus_nattereri
ENSGAGG00000017986	-	92	56.917	ENSPNAG00000024704	-	93	56.917	Pygocentrus_nattereri
ENSGAGG00000017986	-	96	59.561	ENSPNAG00000005914	-	75	60.725	Pygocentrus_nattereri
ENSGAGG00000017986	-	96	62.541	ENSPNAG00000003526	-	94	60.793	Pygocentrus_nattereri
ENSGAGG00000017986	-	96	48.949	ENSPNAG00000029386	-	93	50.193	Pygocentrus_nattereri
ENSGAGG00000017986	-	96	61.275	ENSPNAG00000007072	-	92	62.979	Pygocentrus_nattereri
ENSGAGG00000017986	-	92	62.882	ENSPNAG00000016045	-	68	64.015	Pygocentrus_nattereri
ENSGAGG00000017986	-	90	56.678	ENSPNAG00000012366	-	86	59.245	Pygocentrus_nattereri
ENSGAGG00000017986	-	90	59.912	ENSPNAG00000003919	-	96	60.800	Pygocentrus_nattereri
ENSGAGG00000017986	-	95	58.128	ENSPNAG00000002287	-	85	61.009	Pygocentrus_nattereri
ENSGAGG00000017986	-	93	62.500	ENSPNAG00000008653	-	98	62.500	Pygocentrus_nattereri
ENSGAGG00000017986	-	89	62.917	ENSPNAG00000012138	-	93	62.917	Pygocentrus_nattereri
ENSGAGG00000017986	-	90	65.986	ENSUAMG00000027415	-	99	62.162	Ursus_americanus
ENSGAGG00000017986	-	99	66.667	ENSUAMG00000027384	-	88	64.062	Ursus_americanus
ENSGAGG00000017986	-	91	64.062	ENSVPAG00000002698	-	100	65.000	Vicugna_pacos