EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000018009 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 14099 bases
Position: chrPPEB01004645.1:197-14295
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000024667	R3H	PF01424.22	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000028069	R3HCC1-201	2078	-	ENSGAGP00000024667	682 (aa)	-	-
ENSGAGT00000028070	R3HCC1-202	1853	-	ENSGAGP00000024668	583 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000018009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000018009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000018009	R3HCC1	64	66.667	ENSACAG00000016627	R3HCC1	97	68.452	Anolis_carolinensis
ENSGAGG00000018009	R3HCC1	54	56.471	ENSANAG00000036169	R3HCC1	76	76.404	Aotus_nancymaae
ENSGAGG00000018009	R3HCC1	50	66.667	ENSTSYG00000000511	R3HCC1	59	66.667	Carlito_syrichta
ENSGAGG00000018009	R3HCC1	56	63.522	ENSCLAG00000015556	R3HCC1	75	63.354	Chinchilla_lanigera
ENSGAGG00000018009	R3HCC1	50	61.350	ENSCHOG00000000396	R3HCC1	75	59.763	Choloepus_hoffmanni
ENSGAGG00000018009	R3HCC1	51	61.935	ENSCGRG00001014977	R3hcc1	74	56.647	Cricetulus_griseus_chok1gshd
ENSGAGG00000018009	R3HCC1	51	61.935	ENSCGRG00000004454	R3hcc1	74	56.647	Cricetulus_griseus_crigri
ENSGAGG00000018009	R3HCC1	50	60.819	ENSDNOG00000007168	R3HCC1	69	60.345	Dasypus_novemcinctus
ENSGAGG00000018009	R3HCC1	50	65.409	ENSFCAG00000012395	R3HCC1	72	65.409	Felis_catus
ENSGAGG00000018009	R3HCC1	71	44.700	ENSFALG00000001646	R3HCC1	81	46.544	Ficedula_albicollis
ENSGAGG00000018009	R3HCC1	56	34.416	ENSGMOG00000017590	-	99	34.416	Gadus_morhua
ENSGAGG00000018009	R3HCC1	54	42.723	ENSGACG00000008447	r3hcc1	82	42.723	Gasterosteus_aculeatus
ENSGAGG00000018009	R3HCC1	62	61.111	ENSHGLG00000010517	R3HCC1	82	57.297	Heterocephalus_glaber_female
ENSGAGG00000018009	R3HCC1	62	61.111	ENSHGLG00100006388	R3HCC1	82	57.297	Heterocephalus_glaber_male
ENSGAGG00000018009	R3HCC1	56	42.308	ENSIPUG00000024504	r3hcc1	79	42.308	Ictalurus_punctatus
ENSGAGG00000018009	R3HCC1	52	54.491	ENSLACG00000011894	R3HCC1	77	54.491	Latimeria_chalumnae
ENSGAGG00000018009	R3HCC1	52	53.741	ENSLOCG00000015442	r3hcc1	87	53.741	Lepisosteus_oculatus
ENSGAGG00000018009	R3HCC1	50	63.522	ENSMNEG00000043283	R3HCC1	64	77.528	Macaca_nemestrina
ENSGAGG00000018009	R3HCC1	53	77.778	ENSMGAG00000001356	R3HCC1	71	77.778	Meleagris_gallopavo
ENSGAGG00000018009	R3HCC1	55	57.143	ENSMICG00000011146	R3HCC1	74	77.528	Microcebus_murinus
ENSGAGG00000018009	R3HCC1	55	59.043	ENSMODG00000016809	-	88	59.043	Monodelphis_domestica
ENSGAGG00000018009	R3HCC1	50	61.184	MGP_CAROLIEiJ_G0019467	R3hcc1	63	59.509	Mus_caroli
ENSGAGG00000018009	R3HCC1	51	60.510	MGP_PahariEiJ_G0030484	R3hcc1	69	60.510	Mus_pahari
ENSGAGG00000018009	R3HCC1	51	40.741	ENSOMEG00000000816	r3hcc1	88	40.741	Oryzias_melastigma
ENSGAGG00000018009	R3HCC1	50	62.722	ENSPPRG00000002522	R3HCC1	65	77.528	Panthera_pardus
ENSGAGG00000018009	R3HCC1	56	43.049	ENSPKIG00000014426	-	93	43.049	Paramormyrops_kingsleyae
ENSGAGG00000018009	R3HCC1	68	78.030	ENSPSIG00000017664	R3HCC1	99	78.030	Pelodiscus_sinensis
ENSGAGG00000018009	R3HCC1	52	45.238	ENSPFOG00000022301	r3hcc1	74	45.238	Poecilia_formosa
ENSGAGG00000018009	R3HCC1	52	45.238	ENSPMEG00000022515	r3hcc1	74	45.238	Poecilia_mexicana
ENSGAGG00000018009	R3HCC1	58	64.780	ENSPCOG00000027554	R3HCC1	74	77.528	Propithecus_coquereli
ENSGAGG00000018009	R3HCC1	51	61.935	ENSRNOG00000016777	AABR07018321.1	61	58.480	Rattus_norvegicus
ENSGAGG00000018009	R3HCC1	50	51.462	ENSSSCG00000037347	-	64	53.797	Sus_scrofa
ENSGAGG00000018009	R3HCC1	58	54.088	ENSTTRG00000012247	R3HCC1	84	54.088	Tursiops_truncatus
ENSGAGG00000018009	R3HCC1	50	41.624	ENSXCOG00000017626	r3hcc1	71	44.118	Xiphophorus_couchianus
ENSGAGG00000018009	R3HCC1	52	42.347	ENSXMAG00000018375	r3hcc1	74	44.970	Xiphophorus_maculatus