EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000018216 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 3240 bases
Position: chrPPEB01011431.1:26030-29269
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000024918	zf-U11-48K	PF05253.12	9.8e-21	1	2
ENSGAGP00000024918	zf-U11-48K	PF05253.12	9.8e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000028365	-	348	-	ENSGAGP00000024918	115 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000018216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000018216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000018216	-	74	81.176	ENSGAGG00000016342	-	79	81.176
ENSGAGG00000018216	-	63	86.301	ENSGAGG00000024765	-	68	86.301

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000018216	-	89	45.045	ENSG00000170627	GTSF1	66	45.045	Homo_sapiens
ENSGAGG00000018216	-	68	57.692	ENSAPOG00000022724	-	52	57.692	Acanthochromis_polyacanthus
ENSGAGG00000018216	-	89	45.045	ENSAMEG00000000939	GTSF1	66	45.045	Ailuropoda_melanoleuca
ENSGAGG00000018216	-	73	60.714	ENSACAG00000029590	-	71	60.714	Anolis_carolinensis
ENSGAGG00000018216	-	89	45.045	ENSANAG00000024529	GTSF1	66	45.045	Aotus_nancymaae
ENSGAGG00000018216	-	89	44.144	ENSBTAG00000018085	GTSF1	66	44.144	Bos_taurus
ENSGAGG00000018216	-	89	45.045	ENSCJAG00000018968	-	66	45.045	Callithrix_jacchus
ENSGAGG00000018216	-	89	47.619	ENSCJAG00000039915	-	58	47.619	Callithrix_jacchus
ENSGAGG00000018216	-	89	45.045	ENSCAFG00000006465	-	66	45.045	Canis_familiaris
ENSGAGG00000018216	-	89	45.045	ENSCAFG00020020373	-	64	45.045	Canis_lupus_dingo
ENSGAGG00000018216	-	89	44.144	ENSCHIG00000012215	-	65	44.144	Capra_hircus
ENSGAGG00000018216	-	74	54.118	ENSTSYG00000004679	-	51	54.118	Carlito_syrichta
ENSGAGG00000018216	-	89	45.045	ENSCPOG00000008743	GTSF1	66	45.045	Cavia_porcellus
ENSGAGG00000018216	-	61	60.000	ENSCCAG00000032808	GTSF1	51	60.000	Cebus_capucinus
ENSGAGG00000018216	-	89	45.045	ENSCATG00000036328	GTSF1	66	45.045	Cercocebus_atys
ENSGAGG00000018216	-	89	45.045	ENSCLAG00000012811	GTSF1	66	45.045	Chinchilla_lanigera
ENSGAGG00000018216	-	89	45.045	ENSCSAG00000005394	GTSF1	70	45.045	Chlorocebus_sabaeus
ENSGAGG00000018216	-	89	45.045	ENSCHOG00000001659	GTSF1	67	45.045	Choloepus_hoffmanni
ENSGAGG00000018216	-	89	44.144	ENSCANG00000033118	GTSF1	66	44.144	Colobus_angolensis_palliatus
ENSGAGG00000018216	-	89	45.045	ENSCGRG00001013814	Gtsf1	66	45.045	Cricetulus_griseus_chok1gshd
ENSGAGG00000018216	-	89	45.045	ENSCGRG00000007733	Gtsf1	66	45.045	Cricetulus_griseus_crigri
ENSGAGG00000018216	-	89	45.714	ENSDNOG00000001438	-	63	45.714	Dasypus_novemcinctus
ENSGAGG00000018216	-	89	45.045	ENSDORG00000003228	Gtsf1	66	45.045	Dipodomys_ordii
ENSGAGG00000018216	-	89	45.946	ENSEASG00005010260	GTSF1	60	45.946	Equus_asinus_asinus
ENSGAGG00000018216	-	89	45.946	ENSECAG00000013618	GTSF1	66	45.946	Equus_caballus
ENSGAGG00000018216	-	89	45.045	ENSEEUG00000005185	GTSF1	66	45.045	Erinaceus_europaeus
ENSGAGG00000018216	-	89	45.045	ENSFCAG00000010156	-	66	45.045	Felis_catus
ENSGAGG00000018216	-	57	60.000	ENSFALG00000007613	-	52	60.000	Ficedula_albicollis
ENSGAGG00000018216	-	89	45.045	ENSFDAG00000009383	GTSF1	66	45.045	Fukomys_damarensis
ENSGAGG00000018216	-	89	45.045	ENSGGOG00000016063	GTSF1	66	45.045	Gorilla_gorilla
ENSGAGG00000018216	-	89	44.144	ENSHGLG00000002436	GTSF1	66	44.144	Heterocephalus_glaber_female
ENSGAGG00000018216	-	89	44.144	ENSHGLG00100017301	GTSF1	66	44.144	Heterocephalus_glaber_male
ENSGAGG00000018216	-	89	45.045	ENSSTOG00000025170	GTSF1	66	45.045	Ictidomys_tridecemlineatus
ENSGAGG00000018216	-	89	45.045	ENSJJAG00000003323	-	69	45.045	Jaculus_jaculus
ENSGAGG00000018216	-	89	45.045	ENSLAFG00000016318	GTSF1	66	45.045	Loxodonta_africana
ENSGAGG00000018216	-	89	45.045	ENSMFAG00000041178	GTSF1	66	45.045	Macaca_fascicularis
ENSGAGG00000018216	-	89	45.045	ENSMMUG00000003758	GTSF1	66	45.045	Macaca_mulatta
ENSGAGG00000018216	-	89	45.045	ENSMNEG00000036779	GTSF1	66	45.045	Macaca_nemestrina
ENSGAGG00000018216	-	89	45.045	ENSMLEG00000028375	GTSF1	66	45.045	Mandrillus_leucophaeus
ENSGAGG00000018216	-	89	45.045	ENSMICG00000008444	-	66	45.045	Microcebus_murinus
ENSGAGG00000018216	-	89	45.045	ENSMOCG00000018889	Gtsf1	67	45.045	Microtus_ochrogaster
ENSGAGG00000018216	-	89	45.045	MGP_CAROLIEiJ_G0020379	Gtsf1	87	45.045	Mus_caroli
ENSGAGG00000018216	-	89	45.045	ENSMUSG00000022487	Gtsf1	87	45.045	Mus_musculus
ENSGAGG00000018216	-	89	45.045	MGP_PahariEiJ_G0020378	Gtsf1	87	45.045	Mus_pahari
ENSGAGG00000018216	-	89	45.045	MGP_SPRETEiJ_G0021272	Gtsf1	87	45.045	Mus_spretus
ENSGAGG00000018216	-	89	45.946	ENSMPUG00000019323	-	66	45.946	Mustela_putorius_furo
ENSGAGG00000018216	-	89	45.045	ENSMPUG00000005669	-	66	45.045	Mustela_putorius_furo
ENSGAGG00000018216	-	89	44.144	ENSMLUG00000026557	-	66	44.144	Myotis_lucifugus
ENSGAGG00000018216	-	89	45.045	ENSMLUG00000012961	-	66	45.045	Myotis_lucifugus
ENSGAGG00000018216	-	89	45.045	ENSNGAG00000014213	Gtsf1	66	45.045	Nannospalax_galili
ENSGAGG00000018216	-	89	45.045	ENSNLEG00000017635	GTSF1	66	45.045	Nomascus_leucogenys
ENSGAGG00000018216	-	89	45.045	ENSODEG00000014220	GTSF1	66	45.045	Octodon_degus
ENSGAGG00000018216	-	95	39.062	ENSOANG00000011386	GTSF1	79	39.062	Ornithorhynchus_anatinus
ENSGAGG00000018216	-	89	44.144	ENSOCUG00000024495	GTSF1	66	44.144	Oryctolagus_cuniculus
ENSGAGG00000018216	-	89	44.144	ENSOGAG00000017227	GTSF1	65	44.144	Otolemur_garnettii
ENSGAGG00000018216	-	89	44.144	ENSOARG00000016162	GTSF1	66	44.144	Ovis_aries
ENSGAGG00000018216	-	89	45.045	ENSPPAG00000028506	GTSF1	66	45.045	Pan_paniscus
ENSGAGG00000018216	-	89	45.045	ENSPPRG00000004344	-	66	45.045	Panthera_pardus
ENSGAGG00000018216	-	89	45.045	ENSPTIG00000020415	-	66	45.045	Panthera_tigris_altaica
ENSGAGG00000018216	-	89	45.045	ENSPTRG00000005041	GTSF1	66	45.045	Pan_troglodytes
ENSGAGG00000018216	-	89	45.045	ENSPANG00000020579	GTSF1	66	45.045	Papio_anubis
ENSGAGG00000018216	-	72	78.313	ENSPSIG00000009839	-	52	78.313	Pelodiscus_sinensis
ENSGAGG00000018216	-	89	45.045	ENSPEMG00000009595	Gtsf1	66	45.045	Peromyscus_maniculatus_bairdii
ENSGAGG00000018216	-	89	45.946	ENSPCIG00000006731	GTSF1	66	45.946	Phascolarctos_cinereus
ENSGAGG00000018216	-	89	45.045	ENSPPYG00000004605	GTSF1	66	45.045	Pongo_abelii
ENSGAGG00000018216	-	89	39.640	ENSPCOG00000015201	-	66	39.252	Propithecus_coquereli
ENSGAGG00000018216	-	89	45.045	ENSPCOG00000016907	-	66	45.045	Propithecus_coquereli
ENSGAGG00000018216	-	89	45.045	ENSPVAG00000000333	GTSF1	66	45.045	Pteropus_vampyrus
ENSGAGG00000018216	-	89	45.045	ENSRNOG00000036831	Gtsf1	59	45.045	Rattus_norvegicus
ENSGAGG00000018216	-	89	45.045	ENSRBIG00000043438	-	66	45.045	Rhinopithecus_bieti
ENSGAGG00000018216	-	89	40.541	ENSRBIG00000039916	-	57	40.541	Rhinopithecus_bieti
ENSGAGG00000018216	-	89	45.045	ENSRROG00000008137	GTSF1	66	45.045	Rhinopithecus_roxellana
ENSGAGG00000018216	-	89	45.045	ENSSBOG00000029460	GTSF1	66	45.045	Saimiri_boliviensis_boliviensis
ENSGAGG00000018216	-	89	45.946	ENSSARG00000004928	GTSF1	66	45.946	Sorex_araneus
ENSGAGG00000018216	-	70	58.750	ENSSPUG00000010064	GTSF1	59	64.286	Sphenodon_punctatus
ENSGAGG00000018216	-	89	45.946	ENSSSCG00000026333	GTSF1	66	45.946	Sus_scrofa
ENSGAGG00000018216	-	57	60.000	ENSTGUG00000002008	-	51	60.000	Taeniopygia_guttata
ENSGAGG00000018216	-	89	45.045	ENSTBEG00000006154	GTSF1	69	45.045	Tupaia_belangeri
ENSGAGG00000018216	-	89	45.045	ENSUAMG00000021669	GTSF1	64	45.045	Ursus_americanus
ENSGAGG00000018216	-	89	45.045	ENSUMAG00000011279	GTSF1	66	45.045	Ursus_maritimus
ENSGAGG00000018216	-	89	45.045	ENSVPAG00000007016	GTSF1	67	45.045	Vicugna_pacos
ENSGAGG00000018216	-	89	45.045	ENSVVUG00000023687	-	56	45.045	Vulpes_vulpes