EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000018304 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 7919 bases
Position: chrPPEB01004908.1:98552-106470
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000025030	RNA_pol_L_2	PF13656.6	2.3e-29	1	1
ENSGAGP00000025030	RNA_pol_L	PF01193.24	3.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000028496	-	333	-	ENSGAGP00000025030	110 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000018304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000018304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000018304	-	83	32.967	ENSGAGG00000008503	POLR1D	80	32.967

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000018304	-	96	90.265	ENSG00000005075	POLR2J	97	90.265	Homo_sapiens
ENSGAGG00000018304	-	85	95.745	ENSG00000228049	POLR2J2	83	92.708	Homo_sapiens
ENSGAGG00000018304	-	96	84.956	ENSAPOG00000019538	polr2j	97	84.956	Acanthochromis_polyacanthus
ENSGAGG00000018304	-	96	82.927	ENSAMEG00000015480	-	97	82.927	Ailuropoda_melanoleuca
ENSGAGG00000018304	-	89	60.377	ENSACIG00000014549	POLR2J2	88	60.377	Amphilophus_citrinellus
ENSGAGG00000018304	-	96	84.071	ENSAOCG00000006937	polr2j	97	84.071	Amphiprion_ocellaris
ENSGAGG00000018304	-	96	84.956	ENSAPEG00000021761	polr2j	97	84.956	Amphiprion_percula
ENSGAGG00000018304	-	96	84.956	ENSATEG00000013312	-	97	84.956	Anabas_testudineus
ENSGAGG00000018304	-	96	84.956	ENSATEG00000009731	polr2j	97	84.956	Anabas_testudineus
ENSGAGG00000018304	-	91	100.000	ENSAPLG00000003744	-	99	100.000	Anas_platyrhynchos
ENSGAGG00000018304	-	91	89.000	ENSACAG00000000251	POLR2J	85	89.000	Anolis_carolinensis
ENSGAGG00000018304	-	96	84.956	ENSACLG00000014564	polr2j	97	84.956	Astatotilapia_calliptera
ENSGAGG00000018304	-	96	86.726	ENSAMXG00000007517	polr2j	97	86.726	Astyanax_mexicanus
ENSGAGG00000018304	-	62	67.647	ENSBTAG00000048046	-	57	67.647	Bos_taurus
ENSGAGG00000018304	-	85	68.817	WBGene00012187	rpb-11	76	68.817	Caenorhabditis_elegans
ENSGAGG00000018304	-	96	90.265	ENSCJAG00000016203	-	97	90.265	Callithrix_jacchus
ENSGAGG00000018304	-	96	90.265	ENSCAFG00000013683	-	97	90.265	Canis_familiaris
ENSGAGG00000018304	-	90	100.000	ENSTSYG00000029243	-	85	100.000	Carlito_syrichta
ENSGAGG00000018304	-	96	90.265	ENSCPOG00000001401	-	97	90.265	Cavia_porcellus
ENSGAGG00000018304	-	81	85.870	ENSCATG00000016595	-	97	85.870	Cercocebus_atys
ENSGAGG00000018304	-	96	90.265	ENSCLAG00000005238	-	97	90.265	Chinchilla_lanigera
ENSGAGG00000018304	-	96	90.265	ENSCSAG00000018092	-	97	90.265	Chlorocebus_sabaeus
ENSGAGG00000018304	-	96	73.451	ENSCING00000020531	-	97	73.451	Ciona_intestinalis
ENSGAGG00000018304	-	96	73.451	ENSCSAVG00000006948	-	97	73.451	Ciona_savignyi
ENSGAGG00000018304	-	96	90.265	ENSCGRG00001012814	Polr2j	97	90.265	Cricetulus_griseus_chok1gshd
ENSGAGG00000018304	-	96	74.336	ENSCGRG00000008433	Polr2j	96	74.336	Cricetulus_griseus_crigri
ENSGAGG00000018304	-	96	84.071	ENSCSEG00000020352	polr2j	97	84.071	Cynoglossus_semilaevis
ENSGAGG00000018304	-	96	84.071	ENSCVAG00000014267	polr2j	97	84.071	Cyprinodon_variegatus
ENSGAGG00000018304	-	96	85.841	ENSDARG00000035146	polr2j	97	85.841	Danio_rerio
ENSGAGG00000018304	-	96	90.265	ENSDORG00000005934	Polr2j	97	90.265	Dipodomys_ordii
ENSGAGG00000018304	-	84	79.348	FBgn0032634	Rpb11	79	79.348	Drosophila_melanogaster
ENSGAGG00000018304	-	65	83.099	ENSEBUG00000016100	polr2j	82	83.099	Eptatretus_burgeri
ENSGAGG00000018304	-	96	90.265	ENSEASG00005016864	-	97	90.265	Equus_asinus_asinus
ENSGAGG00000018304	-	96	85.841	ENSELUG00000012822	polr2j	97	85.841	Esox_lucius
ENSGAGG00000018304	-	96	90.265	ENSFCAG00000000377	-	97	90.265	Felis_catus
ENSGAGG00000018304	-	96	90.265	ENSFALG00000009523	POLR2J	97	90.265	Ficedula_albicollis
ENSGAGG00000018304	-	96	90.265	ENSFDAG00000010507	-	97	90.265	Fukomys_damarensis
ENSGAGG00000018304	-	96	84.956	ENSFHEG00000006625	polr2j	97	84.956	Fundulus_heteroclitus
ENSGAGG00000018304	-	96	84.956	ENSGMOG00000018207	polr2j	97	84.956	Gadus_morhua
ENSGAGG00000018304	-	96	90.265	ENSGALG00000030808	-	97	90.265	Gallus_gallus
ENSGAGG00000018304	-	96	84.956	ENSGAFG00000019555	polr2j	97	84.956	Gambusia_affinis
ENSGAGG00000018304	-	96	84.956	ENSGACG00000003310	polr2j	97	84.956	Gasterosteus_aculeatus
ENSGAGG00000018304	-	92	96.040	ENSGGOG00000004519	-	81	96.040	Gorilla_gorilla
ENSGAGG00000018304	-	96	84.956	ENSHBUG00000008467	polr2j	97	84.956	Haplochromis_burtoni
ENSGAGG00000018304	-	96	90.265	ENSHGLG00000013598	POLR2J	97	90.265	Heterocephalus_glaber_female
ENSGAGG00000018304	-	96	90.265	ENSHGLG00100011242	POLR2J	97	90.265	Heterocephalus_glaber_male
ENSGAGG00000018304	-	91	93.000	ENSHCOG00000014827	polr2j	58	93.000	Hippocampus_comes
ENSGAGG00000018304	-	96	86.726	ENSIPUG00000023960	polr2j	97	86.726	Ictalurus_punctatus
ENSGAGG00000018304	-	96	90.265	ENSSTOG00000006377	POLR2J	97	90.265	Ictidomys_tridecemlineatus
ENSGAGG00000018304	-	96	90.265	ENSJJAG00000013854	-	97	90.265	Jaculus_jaculus
ENSGAGG00000018304	-	96	84.956	ENSJJAG00000018834	-	97	84.956	Jaculus_jaculus
ENSGAGG00000018304	-	96	84.956	ENSKMAG00000014581	polr2j	76	84.956	Kryptolebias_marmoratus
ENSGAGG00000018304	-	96	84.956	ENSLBEG00000005885	polr2j	97	84.956	Labrus_bergylta
ENSGAGG00000018304	-	96	86.726	ENSLOCG00000001885	polr2j	86	86.726	Lepisosteus_oculatus
ENSGAGG00000018304	-	96	90.265	ENSLAFG00000021507	-	97	90.265	Loxodonta_africana
ENSGAGG00000018304	-	96	80.952	ENSMMUG00000012019	POLR2J	82	98.592	Macaca_mulatta
ENSGAGG00000018304	-	96	84.956	ENSMAMG00000009374	polr2j	97	84.956	Mastacembelus_armatus
ENSGAGG00000018304	-	96	84.956	ENSMZEG00005011932	polr2j	97	84.956	Maylandia_zebra
ENSGAGG00000018304	-	96	90.265	ENSMGAG00000003534	POLR2J	97	90.265	Meleagris_gallopavo
ENSGAGG00000018304	-	96	90.265	ENSMAUG00000013049	Polr2j	97	90.265	Mesocricetus_auratus
ENSGAGG00000018304	-	83	96.703	ENSMICG00000026811	-	91	96.703	Microcebus_murinus
ENSGAGG00000018304	-	96	90.265	ENSMOCG00000001294	Polr2j	97	90.265	Microtus_ochrogaster
ENSGAGG00000018304	-	96	84.071	ENSMMOG00000013265	polr2j	97	84.071	Mola_mola
ENSGAGG00000018304	-	96	82.258	ENSMODG00000013617	-	97	82.258	Monodelphis_domestica
ENSGAGG00000018304	-	96	84.956	ENSMALG00000020749	polr2j	97	84.956	Monopterus_albus
ENSGAGG00000018304	-	96	90.265	MGP_CAROLIEiJ_G0027851	Polr2j	97	90.265	Mus_caroli
ENSGAGG00000018304	-	96	90.265	ENSMUSG00000039771	Polr2j	97	90.265	Mus_musculus
ENSGAGG00000018304	-	96	90.265	MGP_PahariEiJ_G0024434	Polr2j	97	90.265	Mus_pahari
ENSGAGG00000018304	-	96	90.265	MGP_SPRETEiJ_G0028853	Polr2j	97	90.265	Mus_spretus
ENSGAGG00000018304	-	96	90.265	ENSMLUG00000010467	POLR2J	97	90.265	Myotis_lucifugus
ENSGAGG00000018304	-	96	90.265	ENSNGAG00000023412	Polr2j	97	90.265	Nannospalax_galili
ENSGAGG00000018304	-	91	74.000	ENSODEG00000008559	-	84	74.000	Octodon_degus
ENSGAGG00000018304	-	96	90.265	ENSODEG00000015648	-	97	90.265	Octodon_degus
ENSGAGG00000018304	-	96	84.956	ENSONIG00000000259	polr2j	97	84.956	Oreochromis_niloticus
ENSGAGG00000018304	-	96	87.611	ENSOANG00000020912	POLR2J	97	87.611	Ornithorhynchus_anatinus
ENSGAGG00000018304	-	96	82.927	ENSOCUG00000023609	POLR2J	97	82.927	Oryctolagus_cuniculus
ENSGAGG00000018304	-	96	84.956	ENSORLG00000029046	polr2j	80	84.956	Oryzias_latipes
ENSGAGG00000018304	-	96	84.956	ENSORLG00020007625	polr2j	80	84.956	Oryzias_latipes_hni
ENSGAGG00000018304	-	96	84.956	ENSORLG00015003457	polr2j	80	84.956	Oryzias_latipes_hsok
ENSGAGG00000018304	-	96	84.071	ENSOMEG00000002097	polr2j	97	84.071	Oryzias_melastigma
ENSGAGG00000018304	-	71	80.682	ENSOGAG00000008250	-	69	80.682	Otolemur_garnettii
ENSGAGG00000018304	-	96	90.265	ENSOARG00000014204	-	94	90.265	Ovis_aries
ENSGAGG00000018304	-	96	90.265	ENSPPRG00000012439	-	97	90.265	Panthera_pardus
ENSGAGG00000018304	-	90	100.000	ENSPTIG00000018714	-	96	100.000	Panthera_tigris_altaica
ENSGAGG00000018304	-	91	100.000	ENSPSIG00000010173	-	100	100.000	Pelodiscus_sinensis
ENSGAGG00000018304	-	96	84.956	ENSPMGG00000021256	polr2j	97	84.956	Periophthalmus_magnuspinnatus
ENSGAGG00000018304	-	96	90.265	ENSPEMG00000015733	Polr2j	97	90.265	Peromyscus_maniculatus_bairdii
ENSGAGG00000018304	-	96	90.265	ENSPCIG00000009026	-	97	90.265	Phascolarctos_cinereus
ENSGAGG00000018304	-	96	84.956	ENSPFOG00000012001	polr2j	96	84.956	Poecilia_formosa
ENSGAGG00000018304	-	96	84.956	ENSPLAG00000014075	polr2j	97	84.956	Poecilia_latipinna
ENSGAGG00000018304	-	96	84.956	ENSPMEG00000020585	polr2j	97	84.956	Poecilia_mexicana
ENSGAGG00000018304	-	96	84.956	ENSPREG00000015255	polr2j	97	84.956	Poecilia_reticulata
ENSGAGG00000018304	-	96	90.265	ENSPCOG00000024573	-	97	90.265	Propithecus_coquereli
ENSGAGG00000018304	-	90	91.919	ENSPVAG00000017770	-	57	91.919	Pteropus_vampyrus
ENSGAGG00000018304	-	96	84.956	ENSPNYG00000014832	polr2j	97	84.956	Pundamilia_nyererei
ENSGAGG00000018304	-	96	84.071	ENSPNAG00000016595	polr2j	97	84.071	Pygocentrus_nattereri
ENSGAGG00000018304	-	96	90.265	ENSRNOG00000001430	Polr2j	97	90.265	Rattus_norvegicus
ENSGAGG00000018304	-	96	90.265	ENSSBOG00000025579	-	97	90.265	Saimiri_boliviensis_boliviensis
ENSGAGG00000018304	-	63	100.000	ENSSHAG00000010443	-	81	100.000	Sarcophilus_harrisii
ENSGAGG00000018304	-	89	83.810	ENSSFOG00015003371	polr2j	80	83.810	Scleropages_formosus
ENSGAGG00000018304	-	96	84.956	ENSSMAG00000006729	polr2j	97	84.956	Scophthalmus_maximus
ENSGAGG00000018304	-	96	84.956	ENSSDUG00000018490	polr2j	97	84.956	Seriola_dumerili
ENSGAGG00000018304	-	96	84.956	ENSSLDG00000022354	polr2j	97	84.956	Seriola_lalandi_dorsalis
ENSGAGG00000018304	-	91	100.000	ENSSPUG00000010802	-	97	90.265	Sphenodon_punctatus
ENSGAGG00000018304	-	96	84.956	ENSSPAG00000021953	polr2j	97	84.956	Stegastes_partitus
ENSGAGG00000018304	-	96	90.265	ENSSSCG00000007688	-	97	90.265	Sus_scrofa
ENSGAGG00000018304	-	95	81.731	ENSSSCG00000003703	-	74	81.731	Sus_scrofa
ENSGAGG00000018304	-	91	100.000	ENSTGUG00000004501	-	100	100.000	Taeniopygia_guttata
ENSGAGG00000018304	-	63	100.000	ENSTGUG00000004510	-	100	100.000	Taeniopygia_guttata
ENSGAGG00000018304	-	96	85.841	ENSTRUG00000020842	polr2j	97	85.841	Takifugu_rubripes
ENSGAGG00000018304	-	96	84.956	ENSTNIG00000002994	polr2j	97	84.956	Tetraodon_nigroviridis
ENSGAGG00000018304	-	82	77.778	ENSTBEG00000005797	-	59	77.778	Tupaia_belangeri
ENSGAGG00000018304	-	96	90.265	ENSUAMG00000011310	-	97	90.265	Ursus_americanus
ENSGAGG00000018304	-	96	90.265	ENSUMAG00000012594	-	97	90.265	Ursus_maritimus
ENSGAGG00000018304	-	96	88.496	ENSXETG00000001108	polr2j	97	88.496	Xenopus_tropicalis
ENSGAGG00000018304	-	96	84.956	ENSXMAG00000012422	polr2j	97	84.956	Xiphophorus_maculatus