EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000018644 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 9965 bases
Position: chrPPEB01001753.1:227422-237386
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000025520	MBD	PF01429.19	8.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000029043	MBD4-201	2524	-	ENSGAGP00000025520	571 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000018644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000018644's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000018644	MBD4	89	51.154	ENSG00000129071	MBD4	79	77.404	Homo_sapiens
ENSGAGG00000018644	MBD4	50	61.603	ENSAPOG00000021668	mbd4	62	61.603	Acanthochromis_polyacanthus
ENSGAGG00000018644	MBD4	91	50.484	ENSAMEG00000004562	MBD4	88	50.484	Ailuropoda_melanoleuca
ENSGAGG00000018644	MBD4	50	61.017	ENSAOCG00000001157	mbd4	62	61.017	Amphiprion_ocellaris
ENSGAGG00000018644	MBD4	50	60.593	ENSAPEG00000016131	mbd4	62	60.593	Amphiprion_percula
ENSGAGG00000018644	MBD4	61	80.588	ENSATEG00000014594	MBD4	67	80.588	Anabas_testudineus
ENSGAGG00000018644	MBD4	92	51.532	ENSACAG00000014733	MBD4	92	51.532	Anolis_carolinensis
ENSGAGG00000018644	MBD4	89	51.931	ENSBTAG00000021645	MBD4	87	51.931	Bos_taurus
ENSGAGG00000018644	MBD4	91	50.380	ENSCJAG00000017293	MBD4	87	50.380	Callithrix_jacchus
ENSGAGG00000018644	MBD4	89	51.362	ENSCAFG00000004867	MBD4	86	51.362	Canis_familiaris
ENSGAGG00000018644	MBD4	89	51.362	ENSCAFG00020007082	MBD4	86	51.362	Canis_lupus_dingo
ENSGAGG00000018644	MBD4	98	50.263	ENSCHIG00000009760	MBD4	94	50.263	Capra_hircus
ENSGAGG00000018644	MBD4	89	50.877	ENSCCAG00000029796	MBD4	86	50.877	Cebus_capucinus
ENSGAGG00000018644	MBD4	89	50.766	ENSCATG00000035211	MBD4	72	85.185	Cercocebus_atys
ENSGAGG00000018644	MBD4	98	47.880	ENSCLAG00000008974	MBD4	95	47.880	Chinchilla_lanigera
ENSGAGG00000018644	MBD4	89	51.341	ENSCSAG00000009037	MBD4	87	51.336	Chlorocebus_sabaeus
ENSGAGG00000018644	MBD4	100	92.644	ENSCPBG00000014704	MBD4	100	92.644	Chrysemys_picta_bellii
ENSGAGG00000018644	MBD4	89	50.958	ENSCANG00000007120	MBD4	87	51.149	Colobus_angolensis_palliatus
ENSGAGG00000018644	MBD4	98	49.037	ENSCGRG00001003507	Mbd4	94	49.296	Cricetulus_griseus_chok1gshd
ENSGAGG00000018644	MBD4	98	49.037	ENSCGRG00000010974	Mbd4	94	49.296	Cricetulus_griseus_crigri
ENSGAGG00000018644	MBD4	89	51.644	ENSDNOG00000049619	MBD4	87	51.644	Dasypus_novemcinctus
ENSGAGG00000018644	MBD4	78	45.291	ENSDORG00000000902	-	88	45.291	Dipodomys_ordii
ENSGAGG00000018644	MBD4	89	50.867	ENSEASG00005014800	MBD4	87	50.867	Equus_asinus_asinus
ENSGAGG00000018644	MBD4	89	50.867	ENSECAG00000022106	MBD4	87	50.867	Equus_caballus
ENSGAGG00000018644	MBD4	88	48.627	ENSEEUG00000011459	MBD4	90	48.627	Erinaceus_europaeus
ENSGAGG00000018644	MBD4	89	51.456	ENSFCAG00000000083	MBD4	87	51.456	Felis_catus
ENSGAGG00000018644	MBD4	84	52.556	ENSFALG00000013663	MBD4	100	51.881	Ficedula_albicollis
ENSGAGG00000018644	MBD4	88	39.808	ENSGMOG00000013830	mbd4	100	39.808	Gadus_morhua
ENSGAGG00000018644	MBD4	89	50.769	ENSGGOG00000010698	MBD4	87	51.056	Gorilla_gorilla
ENSGAGG00000018644	MBD4	91	49.618	ENSHGLG00000009034	MBD4	89	49.618	Heterocephalus_glaber_female
ENSGAGG00000018644	MBD4	91	49.618	ENSHGLG00100000135	MBD4	89	49.618	Heterocephalus_glaber_male
ENSGAGG00000018644	MBD4	91	48.972	ENSSTOG00000020663	MBD4	89	48.972	Ictidomys_tridecemlineatus
ENSGAGG00000018644	MBD4	89	43.702	ENSLOCG00000013054	MBD4	99	45.211	Lepisosteus_oculatus
ENSGAGG00000018644	MBD4	89	50.482	ENSLAFG00000010609	MBD4	86	50.482	Loxodonta_africana
ENSGAGG00000018644	MBD4	65	87.786	ENSMFAG00000002266	MBD4	70	87.786	Macaca_fascicularis
ENSGAGG00000018644	MBD4	65	87.786	ENSMMUG00000012723	MBD4	70	87.786	Macaca_mulatta
ENSGAGG00000018644	MBD4	61	90.654	ENSMNEG00000029752	MBD4	68	90.654	Macaca_nemestrina
ENSGAGG00000018644	MBD4	89	50.766	ENSMLEG00000024859	MBD4	72	85.185	Mandrillus_leucophaeus
ENSGAGG00000018644	MBD4	89	50.485	ENSMICG00000008022	MBD4	86	50.485	Microcebus_murinus
ENSGAGG00000018644	MBD4	88	52.446	ENSMODG00000006399	-	99	52.446	Monodelphis_domestica
ENSGAGG00000018644	MBD4	96	48.750	MGP_CAROLIEiJ_G0028760	Mbd4	93	48.750	Mus_caroli
ENSGAGG00000018644	MBD4	96	47.568	ENSMUSG00000030322	Mbd4	93	47.568	Mus_musculus
ENSGAGG00000018644	MBD4	96	48.233	MGP_PahariEiJ_G0022511	-	93	48.233	Mus_pahari
ENSGAGG00000018644	MBD4	96	48.370	MGP_SPRETEiJ_G0029788	Mbd4	93	48.370	Mus_spretus
ENSGAGG00000018644	MBD4	89	50.292	ENSMPUG00000017195	MBD4	86	50.292	Mustela_putorius_furo
ENSGAGG00000018644	MBD4	89	52.794	ENSMLUG00000014766	MBD4	92	52.794	Myotis_lucifugus
ENSGAGG00000018644	MBD4	89	50.962	ENSNLEG00000005337	MBD4	87	51.248	Nomascus_leucogenys
ENSGAGG00000018644	MBD4	98	48.630	ENSOPRG00000000473	MBD4	94	48.630	Ochotona_princeps
ENSGAGG00000018644	MBD4	71	43.309	ENSOANG00000004589	-	97	42.105	Ornithorhynchus_anatinus
ENSGAGG00000018644	MBD4	88	48.162	ENSOCUG00000013006	MBD4	86	48.162	Oryctolagus_cuniculus
ENSGAGG00000018644	MBD4	51	80.473	ENSORLG00000011049	mbd4	66	80.473	Oryzias_latipes
ENSGAGG00000018644	MBD4	63	80.473	ENSORLG00020020013	mbd4	82	80.473	Oryzias_latipes_hni
ENSGAGG00000018644	MBD4	51	79.882	ENSORLG00015015342	mbd4	69	79.882	Oryzias_latipes_hsok
ENSGAGG00000018644	MBD4	88	49.318	ENSOGAG00000010236	MBD4	86	49.318	Otolemur_garnettii
ENSGAGG00000018644	MBD4	93	51.167	ENSOARG00000014699	MBD4	94	51.167	Ovis_aries
ENSGAGG00000018644	MBD4	89	50.192	ENSPPAG00000036528	MBD4	87	50.192	Pan_paniscus
ENSGAGG00000018644	MBD4	89	50.682	ENSPPRG00000016480	MBD4	86	50.682	Panthera_pardus
ENSGAGG00000018644	MBD4	89	50.577	ENSPTRG00000015377	MBD4	87	50.672	Pan_troglodytes
ENSGAGG00000018644	MBD4	65	87.786	ENSPANG00000015047	MBD4	70	87.786	Papio_anubis
ENSGAGG00000018644	MBD4	99	82.293	ENSPSIG00000007892	MBD4	99	82.293	Pelodiscus_sinensis
ENSGAGG00000018644	MBD4	84	45.325	ENSPEMG00000006226	Mbd4	97	43.590	Peromyscus_maniculatus_bairdii
ENSGAGG00000018644	MBD4	95	49.548	ENSPCIG00000002276	-	99	49.548	Phascolarctos_cinereus
ENSGAGG00000018644	MBD4	89	50.383	ENSPPYG00000013417	MBD4	87	50.383	Pongo_abelii
ENSGAGG00000018644	MBD4	85	49.393	ENSPCAG00000012915	MBD4	86	50.607	Procavia_capensis
ENSGAGG00000018644	MBD4	89	51.830	ENSPVAG00000005238	MBD4	86	51.830	Pteropus_vampyrus
ENSGAGG00000018644	MBD4	96	46.975	ENSRNOG00000010919	Mbd4	93	46.073	Rattus_norvegicus
ENSGAGG00000018644	MBD4	65	87.786	ENSRBIG00000027722	MBD4	70	87.786	Rhinopithecus_bieti
ENSGAGG00000018644	MBD4	65	87.786	ENSRROG00000029136	MBD4	70	87.786	Rhinopithecus_roxellana
ENSGAGG00000018644	MBD4	89	51.068	ENSSBOG00000016810	MBD4	86	51.068	Saimiri_boliviensis_boliviensis
ENSGAGG00000018644	MBD4	96	50.536	ENSSHAG00000012953	MBD4	92	50.536	Sarcophilus_harrisii
ENSGAGG00000018644	MBD4	89	42.035	ENSSFOG00015016292	mbd4	97	42.035	Scleropages_formosus
ENSGAGG00000018644	MBD4	65	77.586	ENSSMAG00000013958	-	58	77.586	Scophthalmus_maximus
ENSGAGG00000018644	MBD4	83	46.232	ENSSARG00000004496	-	80	46.232	Sorex_araneus
ENSGAGG00000018644	MBD4	97	64.831	ENSSPUG00000017344	MBD4	99	64.831	Sphenodon_punctatus
ENSGAGG00000018644	MBD4	93	51.210	ENSSSCG00000033303	MBD4	90	51.210	Sus_scrofa
ENSGAGG00000018644	MBD4	65	54.128	ENSTBEG00000003041	-	65	54.128	Tupaia_belangeri
ENSGAGG00000018644	MBD4	89	52.611	ENSTTRG00000011265	MBD4	89	52.611	Tursiops_truncatus
ENSGAGG00000018644	MBD4	89	50.977	ENSUAMG00000000814	MBD4	99	50.977	Ursus_americanus
ENSGAGG00000018644	MBD4	89	50.781	ENSUMAG00000017542	MBD4	87	50.781	Ursus_maritimus
ENSGAGG00000018644	MBD4	51	58.974	ENSVPAG00000004040	-	54	58.974	Vicugna_pacos
ENSGAGG00000018644	MBD4	92	50.851	ENSVVUG00000014222	MBD4	89	50.851	Vulpes_vulpes
ENSGAGG00000018644	MBD4	89	41.459	ENSXETG00000026622	mbd4	90	41.459	Xenopus_tropicalis