EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000018885 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 1683 bases
Position: chrPPEB01007024.1:26217-27899
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000025860	zf-C2H2	PF00096.26	6.3e-57	1	10
ENSGAGP00000025860	zf-C2H2	PF00096.26	6.3e-57	2	10
ENSGAGP00000025860	zf-C2H2	PF00096.26	6.3e-57	3	10
ENSGAGP00000025860	zf-C2H2	PF00096.26	6.3e-57	4	10
ENSGAGP00000025860	zf-C2H2	PF00096.26	6.3e-57	5	10
ENSGAGP00000025860	zf-C2H2	PF00096.26	6.3e-57	6	10
ENSGAGP00000025860	zf-C2H2	PF00096.26	6.3e-57	7	10
ENSGAGP00000025860	zf-C2H2	PF00096.26	6.3e-57	8	10
ENSGAGP00000025860	zf-C2H2	PF00096.26	6.3e-57	9	10
ENSGAGP00000025860	zf-C2H2	PF00096.26	6.3e-57	10	10
ENSGAGP00000025860	zf-met	PF12874.7	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000029416	-	1434	-	ENSGAGP00000025860	477 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000018885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000018885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000018885	-	83	54.167	ENSGAGG00000002179	-	97	54.167
ENSGAGG00000018885	-	73	53.818	ENSGAGG00000010324	-	76	53.818
ENSGAGG00000018885	-	66	53.430	ENSGAGG00000002828	-	70	53.430
ENSGAGG00000018885	-	75	48.387	ENSGAGG00000005805	-	100	48.387
ENSGAGG00000018885	-	73	47.407	ENSGAGG00000018445	-	89	47.407
ENSGAGG00000018885	-	68	55.556	ENSGAGG00000006323	-	95	55.556
ENSGAGG00000018885	-	66	42.424	ENSGAGG00000017094	-	53	42.424
ENSGAGG00000018885	-	69	53.443	ENSGAGG00000009272	-	97	49.627
ENSGAGG00000018885	-	64	35.249	ENSGAGG00000020362	PRDM5	72	34.859
ENSGAGG00000018885	-	77	46.324	ENSGAGG00000017640	-	77	46.512
ENSGAGG00000018885	-	70	54.396	ENSGAGG00000016529	-	92	54.396
ENSGAGG00000018885	-	81	55.806	ENSGAGG00000004740	-	92	55.806
ENSGAGG00000018885	-	76	53.160	ENSGAGG00000011574	-	86	53.160
ENSGAGG00000018885	-	71	48.560	ENSGAGG00000011399	-	95	44.776
ENSGAGG00000018885	-	65	54.688	ENSGAGG00000019349	-	78	54.688
ENSGAGG00000018885	-	65	51.361	ENSGAGG00000001387	-	68	51.361
ENSGAGG00000018885	-	66	50.916	ENSGAGG00000001645	-	63	50.916
ENSGAGG00000018885	-	85	55.061	ENSGAGG00000010833	-	98	55.769
ENSGAGG00000018885	-	67	50.299	ENSGAGG00000013021	-	99	50.299
ENSGAGG00000018885	-	66	53.937	ENSGAGG00000012452	-	77	53.937
ENSGAGG00000018885	-	91	55.369	ENSGAGG00000020594	-	98	55.873
ENSGAGG00000018885	-	69	53.376	ENSGAGG00000014389	-	96	53.376
ENSGAGG00000018885	-	65	55.745	ENSGAGG00000009739	-	100	55.745
ENSGAGG00000018885	-	81	55.488	ENSGAGG00000011487	-	92	55.758
ENSGAGG00000018885	-	77	51.625	ENSGAGG00000008773	-	89	53.925
ENSGAGG00000018885	-	84	54.656	ENSGAGG00000002214	-	96	54.656
ENSGAGG00000018885	-	68	57.025	ENSGAGG00000001469	-	91	57.025
ENSGAGG00000018885	-	67	38.550	ENSGAGG00000003095	ZNF865	81	35.849
ENSGAGG00000018885	-	66	60.000	ENSGAGG00000006683	-	95	56.886
ENSGAGG00000018885	-	65	53.977	ENSGAGG00000006848	-	56	53.977
ENSGAGG00000018885	-	68	45.545	ENSGAGG00000003883	ZNF236	64	45.545
ENSGAGG00000018885	-	65	55.512	ENSGAGG00000015451	-	88	55.512
ENSGAGG00000018885	-	74	55.556	ENSGAGG00000013851	-	82	55.556
ENSGAGG00000018885	-	66	55.598	ENSGAGG00000017986	-	93	53.448
ENSGAGG00000018885	-	73	45.064	ENSGAGG00000005331	-	93	45.064
ENSGAGG00000018885	-	73	47.619	ENSGAGG00000020168	-	74	47.619
ENSGAGG00000018885	-	79	53.543	ENSGAGG00000014356	-	96	54.475
ENSGAGG00000018885	-	66	53.552	ENSGAGG00000004926	-	96	53.552
ENSGAGG00000018885	-	83	50.917	ENSGAGG00000006960	-	79	57.439
ENSGAGG00000018885	-	66	52.893	ENSGAGG00000020134	-	64	52.893
ENSGAGG00000018885	-	67	50.479	ENSGAGG00000006846	-	87	51.667
ENSGAGG00000018885	-	65	37.226	ENSGAGG00000025218	ZBTB41	51	37.226
ENSGAGG00000018885	-	65	54.894	ENSGAGG00000000971	-	91	54.894
ENSGAGG00000018885	-	69	50.502	ENSGAGG00000011366	-	99	50.502
ENSGAGG00000018885	-	74	30.347	ENSGAGG00000022082	PRDM15	55	30.347
ENSGAGG00000018885	-	65	56.213	ENSGAGG00000010492	-	83	56.213
ENSGAGG00000018885	-	77	52.837	ENSGAGG00000007230	-	94	52.837
ENSGAGG00000018885	-	67	36.364	ENSGAGG00000022571	ZNF319	93	38.079
ENSGAGG00000018885	-	81	47.692	ENSGAGG00000015232	-	97	47.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000018885	-	65	48.619	ENSACAG00000024898	-	98	48.619	Anolis_carolinensis
ENSGAGG00000018885	-	68	48.875	ENSACAG00000008664	-	67	48.875	Anolis_carolinensis
ENSGAGG00000018885	-	89	90.335	ENSACAG00000024956	-	94	90.335	Anolis_carolinensis
ENSGAGG00000018885	-	76	50.502	ENSAMXG00000038536	-	97	50.502	Astyanax_mexicanus
ENSGAGG00000018885	-	68	53.465	ENSAMXG00000034847	-	89	53.465	Astyanax_mexicanus
ENSGAGG00000018885	-	65	53.082	ENSAMXG00000038636	-	98	53.082	Astyanax_mexicanus
ENSGAGG00000018885	-	81	42.140	ENSAMXG00000040198	-	51	42.809	Astyanax_mexicanus
ENSGAGG00000018885	-	68	49.442	ENSAMXG00000034344	-	86	49.442	Astyanax_mexicanus
ENSGAGG00000018885	-	74	52.090	ENSAMXG00000025452	-	99	52.090	Astyanax_mexicanus
ENSGAGG00000018885	-	68	54.867	ENSAMXG00000042784	-	91	54.867	Astyanax_mexicanus
ENSGAGG00000018885	-	66	43.357	ENSAMXG00000035246	-	66	43.357	Astyanax_mexicanus
ENSGAGG00000018885	-	76	50.502	ENSAMXG00000042746	-	97	50.502	Astyanax_mexicanus
ENSGAGG00000018885	-	68	52.294	ENSAMXG00000010805	-	94	52.294	Astyanax_mexicanus
ENSGAGG00000018885	-	67	48.630	ENSAMXG00000038325	-	92	53.191	Astyanax_mexicanus
ENSGAGG00000018885	-	73	48.525	ENSAMXG00000036233	-	92	48.525	Astyanax_mexicanus
ENSGAGG00000018885	-	65	51.852	ENSAMXG00000032841	-	77	51.852	Astyanax_mexicanus
ENSGAGG00000018885	-	65	40.203	ENSBTAG00000038322	-	76	41.277	Bos_taurus
ENSGAGG00000018885	-	69	53.846	ENSCPBG00000026433	-	56	53.846	Chrysemys_picta_bellii
ENSGAGG00000018885	-	69	39.116	ENSCPBG00000013652	-	69	39.116	Chrysemys_picta_bellii
ENSGAGG00000018885	-	71	43.644	ENSCPBG00000001526	-	87	43.644	Chrysemys_picta_bellii
ENSGAGG00000018885	-	77	48.178	ENSCPBG00000008580	-	77	45.872	Chrysemys_picta_bellii
ENSGAGG00000018885	-	74	39.205	ENSCSAVG00000010960	-	95	47.115	Ciona_savignyi
ENSGAGG00000018885	-	67	42.500	ENSDNOG00000047495	-	79	42.500	Dasypus_novemcinctus
ENSGAGG00000018885	-	67	48.750	ENSEBUG00000012919	-	73	48.750	Eptatretus_burgeri
ENSGAGG00000018885	-	72	35.398	ENSEBUG00000013875	-	86	35.398	Eptatretus_burgeri
ENSGAGG00000018885	-	68	46.624	ENSEBUG00000011694	-	95	46.624	Eptatretus_burgeri
ENSGAGG00000018885	-	80	45.424	ENSEBUG00000011435	-	88	45.424	Eptatretus_burgeri
ENSGAGG00000018885	-	72	44.928	ENSEBUG00000002075	-	88	45.161	Eptatretus_burgeri
ENSGAGG00000018885	-	76	44.068	ENSEBUG00000005264	-	86	44.068	Eptatretus_burgeri
ENSGAGG00000018885	-	74	46.721	ENSEBUG00000008306	-	79	46.721	Eptatretus_burgeri
ENSGAGG00000018885	-	68	39.689	ENSEBUG00000014717	-	73	38.629	Eptatretus_burgeri
ENSGAGG00000018885	-	63	43.581	ENSEBUG00000015837	-	78	43.581	Eptatretus_burgeri
ENSGAGG00000018885	-	67	39.298	ENSEASG00005004469	-	70	40.084	Equus_asinus_asinus
ENSGAGG00000018885	-	66	49.791	ENSFHEG00000004382	-	50	49.791	Fundulus_heteroclitus
ENSGAGG00000018885	-	73	37.716	ENSGMOG00000018506	-	100	40.199	Gadus_morhua
ENSGAGG00000018885	-	66	53.898	ENSGALG00000044069	-	55	53.898	Gallus_gallus
ENSGAGG00000018885	-	67	53.091	ENSGALG00000054325	-	97	53.055	Gallus_gallus
ENSGAGG00000018885	-	66	48.341	ENSGALG00000053507	-	79	48.341	Gallus_gallus
ENSGAGG00000018885	-	65	55.517	ENSGALG00000046336	-	98	55.517	Gallus_gallus
ENSGAGG00000018885	-	65	52.703	ENSGALG00000055127	-	71	52.703	Gallus_gallus
ENSGAGG00000018885	-	65	43.793	ENSGALG00000049609	-	56	43.793	Gallus_gallus
ENSGAGG00000018885	-	66	46.617	ENSGACG00000006283	-	97	46.610	Gasterosteus_aculeatus
ENSGAGG00000018885	-	66	45.570	ENSHCOG00000018201	-	85	45.570	Hippocampus_comes
ENSGAGG00000018885	-	74	33.512	ENSIPUG00000012109	ZN12	58	33.512	Ictalurus_punctatus
ENSGAGG00000018885	-	67	52.747	ENSIPUG00000021515	-	85	52.747	Ictalurus_punctatus
ENSGAGG00000018885	-	72	53.125	ENSIPUG00000015468	-	83	52.535	Ictalurus_punctatus
ENSGAGG00000018885	-	66	45.783	ENSJJAG00000023633	Zfp672	91	45.455	Jaculus_jaculus
ENSGAGG00000018885	-	65	38.305	ENSLACG00000005264	-	97	38.305	Latimeria_chalumnae
ENSGAGG00000018885	-	66	36.986	ENSLACG00000009005	-	100	36.842	Latimeria_chalumnae
ENSGAGG00000018885	-	73	51.389	ENSLACG00000022211	-	84	51.389	Latimeria_chalumnae
ENSGAGG00000018885	-	65	41.525	ENSLOCG00000017864	-	99	41.525	Lepisosteus_oculatus
ENSGAGG00000018885	-	65	49.289	ENSMGAG00000013362	-	100	49.289	Meleagris_gallopavo
ENSGAGG00000018885	-	69	46.371	ENSMAUG00000009945	Zfp672	90	46.032	Mesocricetus_auratus
ENSGAGG00000018885	-	68	45.865	ENSMMOG00000003923	-	83	45.865	Mola_mola
ENSGAGG00000018885	-	81	49.518	ENSMODG00000010532	-	86	49.518	Monodelphis_domestica
ENSGAGG00000018885	-	70	51.186	ENSMODG00000001880	-	81	51.186	Monodelphis_domestica
ENSGAGG00000018885	-	66	45.968	MGP_CAROLIEiJ_G0016391	Zfp672	90	45.635	Mus_caroli
ENSGAGG00000018885	-	65	46.825	MGP_CAROLIEiJ_G0030502	-	62	46.825	Mus_caroli
ENSGAGG00000018885	-	91	44.932	ENSMUSG00000030823	9130019O22Rik	87	44.932	Mus_musculus
ENSGAGG00000018885	-	65	44.583	MGP_SPRETEiJ_G0031613	-	84	44.583	Mus_spretus
ENSGAGG00000018885	-	71	45.968	MGP_SPRETEiJ_G0017233	Zfp672	98	41.250	Mus_spretus
ENSGAGG00000018885	-	76	36.729	ENSNGAG00000015777	Zim1	82	42.435	Nannospalax_galili
ENSGAGG00000018885	-	66	42.365	ENSNBRG00000000708	-	91	40.237	Neolamprologus_brichardi
ENSGAGG00000018885	-	77	39.695	ENSNBRG00000007276	-	78	39.695	Neolamprologus_brichardi
ENSGAGG00000018885	-	60	44.961	ENSORLG00020001922	-	92	44.056	Oryzias_latipes_hni
ENSGAGG00000018885	-	65	49.333	ENSOMEG00000001598	-	66	49.333	Oryzias_melastigma
ENSGAGG00000018885	-	78	48.077	ENSPSIG00000012650	-	78	48.077	Pelodiscus_sinensis
ENSGAGG00000018885	-	79	47.521	ENSPSIG00000003152	-	90	47.521	Pelodiscus_sinensis
ENSGAGG00000018885	-	66	40.784	ENSPSIG00000006586	-	99	42.958	Pelodiscus_sinensis
ENSGAGG00000018885	-	75	42.199	ENSPSIG00000010328	-	84	42.199	Pelodiscus_sinensis
ENSGAGG00000018885	-	68	44.828	ENSPSIG00000000672	-	85	44.828	Pelodiscus_sinensis
ENSGAGG00000018885	-	73	51.986	ENSPSIG00000015459	-	79	51.986	Pelodiscus_sinensis
ENSGAGG00000018885	-	66	49.780	ENSPSIG00000005672	-	70	49.780	Pelodiscus_sinensis
ENSGAGG00000018885	-	69	86.264	ENSPSIG00000006790	-	99	86.264	Pelodiscus_sinensis
ENSGAGG00000018885	-	81	52.333	ENSPSIG00000016380	-	89	52.333	Pelodiscus_sinensis
ENSGAGG00000018885	-	69	54.733	ENSPSIG00000013021	-	71	54.733	Pelodiscus_sinensis
ENSGAGG00000018885	-	65	50.000	ENSPSIG00000004502	-	54	50.000	Pelodiscus_sinensis
ENSGAGG00000018885	-	77	54.417	ENSPSIG00000010248	-	69	54.417	Pelodiscus_sinensis
ENSGAGG00000018885	-	75	54.331	ENSPSIG00000005603	-	73	54.331	Pelodiscus_sinensis
ENSGAGG00000018885	-	65	42.105	ENSPREG00000002642	-	91	42.105	Poecilia_reticulata
ENSGAGG00000018885	-	66	44.860	ENSPNYG00000015486	-	65	44.860	Pundamilia_nyererei
ENSGAGG00000018885	-	64	53.881	ENSPNAG00000018395	-	59	53.881	Pygocentrus_nattereri
ENSGAGG00000018885	-	71	55.612	ENSPNAG00000000088	-	92	55.612	Pygocentrus_nattereri
ENSGAGG00000018885	-	67	45.968	ENSRNOG00000002713	Zfp672	91	45.635	Rattus_norvegicus
ENSGAGG00000018885	-	65	47.588	ENSSHAG00000018106	-	76	47.588	Sarcophilus_harrisii
ENSGAGG00000018885	-	70	51.768	ENSSFOG00015019818	-	74	51.768	Scleropages_formosus
ENSGAGG00000018885	-	67	40.741	ENSSMAG00000004252	-	88	37.135	Scophthalmus_maximus
ENSGAGG00000018885	-	88	52.451	ENSSPUG00000004366	-	81	52.451	Sphenodon_punctatus
ENSGAGG00000018885	-	71	56.643	ENSSPUG00000010016	-	97	55.254	Sphenodon_punctatus
ENSGAGG00000018885	-	72	49.541	ENSSPAG00000021653	-	97	49.541	Stegastes_partitus
ENSGAGG00000018885	-	67	53.871	ENSTGUG00000015210	-	100	53.871	Taeniopygia_guttata
ENSGAGG00000018885	-	65	51.852	ENSTGUG00000018351	-	100	51.852	Taeniopygia_guttata
ENSGAGG00000018885	-	77	46.047	ENSTRUG00000022066	-	90	52.632	Takifugu_rubripes
ENSGAGG00000018885	-	65	44.569	ENSXETG00000031192	-	100	44.569	Xenopus_tropicalis
ENSGAGG00000018885	-	65	53.125	ENSXCOG00000006553	-	85	53.125	Xiphophorus_couchianus
ENSGAGG00000018885	-	75	43.636	ENSXMAG00000026680	-	78	43.636	Xiphophorus_maculatus