EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000018983 (Gene tree)
Gene ID: -
Gene Symbol: PUM3
Alias: HA-8|KIAA0020|PEN|PUF6|XTP5|hPUF-A
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 34857 bases
Position: chrPPEB01006178.1:3540-38396
Accession: 29676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000026142	CPL	PF08144.11	9e-53	1	1
ENSGAGP00000026144	CPL	PF08144.11	1.5e-52	1	1
ENSGAGP00000026140	CPL	PF08144.11	1.9e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000029727	PUM3-201	1902	-	ENSGAGP00000026140	633 (aa)	-	-
ENSGAGT00000029732	PUM3-203	1860	-	ENSGAGP00000026144	619 (aa)	-	-
ENSGAGT00000029730	PUM3-202	1818	-	ENSGAGP00000026142	605 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000018983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000018983's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000018983	PUM3	99	73.408	ENSG00000080608	PUM3	100	72.840	Homo_sapiens
ENSGAGG00000018983	PUM3	99	56.098	ENSAPOG00000020252	pum3	96	57.393	Acanthochromis_polyacanthus
ENSGAGG00000018983	PUM3	99	73.206	ENSAMEG00000012187	PUM3	100	72.798	Ailuropoda_melanoleuca
ENSGAGG00000018983	PUM3	99	52.581	ENSACIG00000009786	pum3	96	52.419	Amphilophus_citrinellus
ENSGAGG00000018983	PUM3	97	58.347	ENSAOCG00000004439	pum3	96	57.508	Amphiprion_ocellaris
ENSGAGG00000018983	PUM3	97	58.347	ENSAPEG00000020523	pum3	96	57.508	Amphiprion_percula
ENSGAGG00000018983	PUM3	86	63.227	ENSATEG00000005799	pum3	95	57.504	Anabas_testudineus
ENSGAGG00000018983	PUM3	98	80.515	ENSAPLG00000002920	PUM3	100	80.515	Anas_platyrhynchos
ENSGAGG00000018983	PUM3	93	77.288	ENSACAG00000003174	PUM3	99	77.288	Anolis_carolinensis
ENSGAGG00000018983	PUM3	99	73.206	ENSANAG00000024520	PUM3	100	72.643	Aotus_nancymaae
ENSGAGG00000018983	PUM3	98	57.190	ENSACLG00000001017	pum3	97	55.349	Astatotilapia_calliptera
ENSGAGG00000018983	PUM3	99	64.308	ENSAMXG00000020911	pum3	99	64.308	Astyanax_mexicanus
ENSGAGG00000018983	PUM3	98	73.387	ENSBTAG00000013357	PUM3	100	72.488	Bos_taurus
ENSGAGG00000018983	PUM3	79	31.187	WBGene00014165	puf-12	64	31.187	Caenorhabditis_elegans
ENSGAGG00000018983	PUM3	98	73.871	ENSCJAG00000010917	PUM3	100	72.798	Callithrix_jacchus
ENSGAGG00000018983	PUM3	98	73.226	ENSCAFG00000002035	PUM3	99	72.179	Canis_familiaris
ENSGAGG00000018983	PUM3	98	73.065	ENSCAFG00020026867	PUM3	99	72.025	Canis_lupus_dingo
ENSGAGG00000018983	PUM3	98	73.226	ENSCHIG00000021559	PUM3	100	72.334	Capra_hircus
ENSGAGG00000018983	PUM3	99	72.568	ENSTSYG00000007481	PUM3	100	72.334	Carlito_syrichta
ENSGAGG00000018983	PUM3	99	71.019	ENSCAPG00000010592	-	99	70.216	Cavia_aperea
ENSGAGG00000018983	PUM3	99	72.089	ENSCPOG00000008552	-	99	71.406	Cavia_porcellus
ENSGAGG00000018983	PUM3	98	73.387	ENSCCAG00000032650	PUM3	100	72.334	Cebus_capucinus
ENSGAGG00000018983	PUM3	100	72.994	ENSCATG00000024880	PUM3	100	73.107	Cercocebus_atys
ENSGAGG00000018983	PUM3	99	73.684	ENSCLAG00000011892	PUM3	99	72.643	Chinchilla_lanigera
ENSGAGG00000018983	PUM3	99	74.163	ENSCSAG00000008691	PUM3	100	73.570	Chlorocebus_sabaeus
ENSGAGG00000018983	PUM3	99	56.577	ENSCHOG00000002535	PUM3	95	56.656	Choloepus_hoffmanni
ENSGAGG00000018983	PUM3	100	96.535	ENSCPBG00000025470	PUM3	95	96.535	Chrysemys_picta_bellii
ENSGAGG00000018983	PUM3	88	40.280	ENSCING00000024199	-	99	39.324	Ciona_intestinalis
ENSGAGG00000018983	PUM3	87	39.416	ENSCSAVG00000006072	-	99	39.885	Ciona_savignyi
ENSGAGG00000018983	PUM3	99	73.844	ENSCANG00000006142	PUM3	100	73.261	Colobus_angolensis_palliatus
ENSGAGG00000018983	PUM3	98	73.226	ENSCGRG00001016402	Pum3	99	72.025	Cricetulus_griseus_chok1gshd
ENSGAGG00000018983	PUM3	98	73.226	ENSCGRG00000010207	Pum3	99	72.025	Cricetulus_griseus_crigri
ENSGAGG00000018983	PUM3	84	59.538	ENSCSEG00000001565	pum3	99	57.417	Cynoglossus_semilaevis
ENSGAGG00000018983	PUM3	73	53.903	ENSCVAG00000006550	pum3	99	53.903	Cyprinodon_variegatus
ENSGAGG00000018983	PUM3	98	64.943	ENSDARG00000087779	pum3	99	64.331	Danio_rerio
ENSGAGG00000018983	PUM3	99	63.636	ENSDNOG00000008157	PUM3	70	63.988	Dasypus_novemcinctus
ENSGAGG00000018983	PUM3	85	72.676	ENSETEG00000015331	PUM3	84	73.211	Echinops_telfairi
ENSGAGG00000018983	PUM3	83	41.143	ENSEBUG00000011586	pum3	75	41.897	Eptatretus_burgeri
ENSGAGG00000018983	PUM3	98	74.032	ENSEASG00005010350	PUM3	100	72.952	Equus_asinus_asinus
ENSGAGG00000018983	PUM3	98	74.355	ENSECAG00000017193	PUM3	100	73.261	Equus_caballus
ENSGAGG00000018983	PUM3	91	67.535	ENSEEUG00000010314	PUM3	100	66.833	Erinaceus_europaeus
ENSGAGG00000018983	PUM3	96	63.228	ENSELUG00000002215	pum3	93	63.228	Esox_lucius
ENSGAGG00000018983	PUM3	98	81.549	ENSFALG00000010509	PUM3	100	80.282	Ficedula_albicollis
ENSGAGG00000018983	PUM3	99	72.408	ENSFDAG00000021027	PUM3	99	72.025	Fukomys_damarensis
ENSGAGG00000018983	PUM3	89	61.680	ENSFHEG00000015576	pum3	99	61.680	Fundulus_heteroclitus
ENSGAGG00000018983	PUM3	86	59.925	ENSGMOG00000014217	pum3	99	59.925	Gadus_morhua
ENSGAGG00000018983	PUM3	99	79.154	ENSGALG00000010178	PUM3	100	79.154	Gallus_gallus
ENSGAGG00000018983	PUM3	58	62.604	ENSGAFG00000001930	pum3	62	62.604	Gambusia_affinis
ENSGAGG00000018983	PUM3	86	60.714	ENSGACG00000017878	pum3	97	60.755	Gasterosteus_aculeatus
ENSGAGG00000018983	PUM3	99	73.684	ENSGGOG00000006143	PUM3	100	73.107	Gorilla_gorilla
ENSGAGG00000018983	PUM3	99	50.395	ENSHBUG00000012903	pum3	99	50.395	Haplochromis_burtoni
ENSGAGG00000018983	PUM3	99	73.844	ENSHGLG00000015868	-	99	73.107	Heterocephalus_glaber_female
ENSGAGG00000018983	PUM3	99	73.844	ENSHGLG00100018825	PUM3	100	73.107	Heterocephalus_glaber_male
ENSGAGG00000018983	PUM3	99	55.276	ENSHCOG00000010306	pum3	91	55.450	Hippocampus_comes
ENSGAGG00000018983	PUM3	90	67.021	ENSIPUG00000024801	pum3	99	63.434	Ictalurus_punctatus
ENSGAGG00000018983	PUM3	99	73.844	ENSSTOG00000009586	PUM3	99	72.952	Ictidomys_tridecemlineatus
ENSGAGG00000018983	PUM3	99	71.246	ENSJJAG00000012563	Pum3	99	70.898	Jaculus_jaculus
ENSGAGG00000018983	PUM3	98	59.113	ENSKMAG00000010277	pum3	99	57.433	Kryptolebias_marmoratus
ENSGAGG00000018983	PUM3	99	56.752	ENSLBEG00000012213	pum3	95	55.869	Labrus_bergylta
ENSGAGG00000018983	PUM3	99	72.126	ENSLACG00000008312	PUM3	99	72.283	Latimeria_chalumnae
ENSGAGG00000018983	PUM3	99	66.771	ENSLOCG00000012529	pum3	99	66.771	Lepisosteus_oculatus
ENSGAGG00000018983	PUM3	99	72.160	ENSLAFG00000017341	PUM3	99	71.783	Loxodonta_africana
ENSGAGG00000018983	PUM3	99	73.684	ENSMFAG00000001430	PUM3	100	73.107	Macaca_fascicularis
ENSGAGG00000018983	PUM3	100	72.994	ENSMMUG00000002362	PUM3	99	72.994	Macaca_mulatta
ENSGAGG00000018983	PUM3	99	73.684	ENSMNEG00000035288	PUM3	100	73.107	Macaca_nemestrina
ENSGAGG00000018983	PUM3	99	74.003	ENSMLEG00000034820	PUM3	100	73.416	Mandrillus_leucophaeus
ENSGAGG00000018983	PUM3	86	62.664	ENSMAMG00000022861	pum3	95	57.488	Mastacembelus_armatus
ENSGAGG00000018983	PUM3	99	55.352	ENSMZEG00005014205	pum3	97	55.199	Maylandia_zebra
ENSGAGG00000018983	PUM3	98	72.115	ENSMGAG00000002255	PUM3	100	75.231	Meleagris_gallopavo
ENSGAGG00000018983	PUM3	99	73.206	ENSMAUG00000009733	Pum3	99	72.488	Mesocricetus_auratus
ENSGAGG00000018983	PUM3	100	72.994	ENSMICG00000045916	PUM3	87	72.994	Microcebus_murinus
ENSGAGG00000018983	PUM3	99	72.887	ENSMOCG00000019519	-	99	72.025	Microtus_ochrogaster
ENSGAGG00000018983	PUM3	99	68.934	ENSMOCG00000014830	-	100	68.934	Microtus_ochrogaster
ENSGAGG00000018983	PUM3	98	52.488	ENSMMOG00000012184	pum3	99	52.488	Mola_mola
ENSGAGG00000018983	PUM3	99	71.649	ENSMODG00000015417	PUM3	99	64.800	Monodelphis_domestica
ENSGAGG00000018983	PUM3	98	56.661	ENSMALG00000022164	pum3	93	56.240	Monopterus_albus
ENSGAGG00000018983	PUM3	99	72.408	MGP_CAROLIEiJ_G0022845	Pum3	99	71.870	Mus_caroli
ENSGAGG00000018983	PUM3	99	72.249	ENSMUSG00000041360	Pum3	99	71.716	Mus_musculus
ENSGAGG00000018983	PUM3	99	72.843	MGP_PahariEiJ_G0014338	Pum3	99	72.136	Mus_pahari
ENSGAGG00000018983	PUM3	99	72.249	MGP_SPRETEiJ_G0023763	Pum3	99	71.716	Mus_spretus
ENSGAGG00000018983	PUM3	98	72.097	ENSMPUG00000005125	PUM3	100	71.097	Mustela_putorius_furo
ENSGAGG00000018983	PUM3	99	72.364	ENSMLUG00000002309	PUM3	99	71.672	Myotis_lucifugus
ENSGAGG00000018983	PUM3	99	67.692	ENSNGAG00000019468	Pum3	100	69.337	Nannospalax_galili
ENSGAGG00000018983	PUM3	88	57.353	ENSNBRG00000021370	pum3	79	60.679	Neolamprologus_brichardi
ENSGAGG00000018983	PUM3	99	73.684	ENSNLEG00000008712	PUM3	100	73.107	Nomascus_leucogenys
ENSGAGG00000018983	PUM3	79	55.350	ENSMEUG00000013606	-	99	56.088	Notamacropus_eugenii
ENSGAGG00000018983	PUM3	77	62.864	ENSOPRG00000004225	-	79	62.791	Ochotona_princeps
ENSGAGG00000018983	PUM3	98	73.226	ENSODEG00000003625	-	99	71.870	Octodon_degus
ENSGAGG00000018983	PUM3	100	66.404	ENSODEG00000016477	-	100	66.923	Octodon_degus
ENSGAGG00000018983	PUM3	99	55.678	ENSONIG00000012733	pum3	97	55.678	Oreochromis_niloticus
ENSGAGG00000018983	PUM3	85	75.332	ENSOANG00000014995	PUM3	99	75.780	Ornithorhynchus_anatinus
ENSGAGG00000018983	PUM3	98	72.903	ENSOCUG00000026104	-	100	71.894	Oryctolagus_cuniculus
ENSGAGG00000018983	PUM3	98	73.065	ENSOCUG00000004189	-	100	72.025	Oryctolagus_cuniculus
ENSGAGG00000018983	PUM3	98	55.041	ENSORLG00000014935	pum3	97	54.213	Oryzias_latipes
ENSGAGG00000018983	PUM3	98	55.041	ENSORLG00020002841	pum3	97	54.213	Oryzias_latipes_hni
ENSGAGG00000018983	PUM3	99	54.213	ENSORLG00015015906	pum3	97	54.213	Oryzias_latipes_hsok
ENSGAGG00000018983	PUM3	96	56.061	ENSOMEG00000009427	pum3	97	54.299	Oryzias_melastigma
ENSGAGG00000018983	PUM3	99	72.685	ENSOGAG00000008125	-	100	72.685	Otolemur_garnettii
ENSGAGG00000018983	PUM3	99	55.538	ENSOGAG00000033481	-	99	55.538	Otolemur_garnettii
ENSGAGG00000018983	PUM3	98	72.830	ENSOARG00000013337	PUM3	100	71.957	Ovis_aries
ENSGAGG00000018983	PUM3	99	73.567	ENSPPAG00000041337	PUM3	100	72.994	Pan_paniscus
ENSGAGG00000018983	PUM3	99	71.451	ENSPPRG00000000809	PUM3	100	70.788	Panthera_pardus
ENSGAGG00000018983	PUM3	99	71.770	ENSPTIG00000021934	PUM3	100	71.097	Panthera_tigris_altaica
ENSGAGG00000018983	PUM3	99	73.726	ENSPTRG00000020735	PUM3	100	73.148	Pan_troglodytes
ENSGAGG00000018983	PUM3	99	74.163	ENSPANG00000025118	PUM3	100	73.570	Papio_anubis
ENSGAGG00000018983	PUM3	99	63.524	ENSPKIG00000022249	pum3	99	63.980	Paramormyrops_kingsleyae
ENSGAGG00000018983	PUM3	99	90.852	ENSPSIG00000016272	PUM3	100	90.852	Pelodiscus_sinensis
ENSGAGG00000018983	PUM3	79	60.446	ENSPMGG00000021261	pum3	99	60.446	Periophthalmus_magnuspinnatus
ENSGAGG00000018983	PUM3	90	67.257	ENSPEMG00000019340	-	100	67.257	Peromyscus_maniculatus_bairdii
ENSGAGG00000018983	PUM3	97	71.217	ENSPCIG00000030598	PUM3	100	64.045	Phascolarctos_cinereus
ENSGAGG00000018983	PUM3	98	57.143	ENSPFOG00000001719	pum3	99	57.237	Poecilia_formosa
ENSGAGG00000018983	PUM3	99	54.489	ENSPLAG00000020010	pum3	99	55.730	Poecilia_latipinna
ENSGAGG00000018983	PUM3	99	54.799	ENSPMEG00000017451	pum3	99	55.799	Poecilia_mexicana
ENSGAGG00000018983	PUM3	57	39.143	ENSPREG00000019478	-	70	51.337	Poecilia_reticulata
ENSGAGG00000018983	PUM3	99	74.163	ENSPPYG00000019255	PUM3	100	73.725	Pongo_abelii
ENSGAGG00000018983	PUM3	99	63.679	ENSPCAG00000005797	PUM3	95	63.679	Procavia_capensis
ENSGAGG00000018983	PUM3	98	74.960	ENSPCOG00000027325	PUM3	100	73.725	Propithecus_coquereli
ENSGAGG00000018983	PUM3	99	71.338	ENSPVAG00000016135	PUM3	95	70.634	Pteropus_vampyrus
ENSGAGG00000018983	PUM3	99	55.365	ENSPNYG00000016124	pum3	98	56.044	Pundamilia_nyererei
ENSGAGG00000018983	PUM3	99	62.658	ENSPNAG00000026524	pum3	99	62.658	Pygocentrus_nattereri
ENSGAGG00000018983	PUM3	99	71.611	ENSRNOG00000012574	Pum3	100	70.943	Rattus_norvegicus
ENSGAGG00000018983	PUM3	99	71.292	ENSRNOG00000048356	RGD1308750	100	70.634	Rattus_norvegicus
ENSGAGG00000018983	PUM3	99	73.844	ENSRBIG00000036924	PUM3	100	73.107	Rhinopithecus_bieti
ENSGAGG00000018983	PUM3	99	73.844	ENSRROG00000041089	PUM3	100	73.261	Rhinopithecus_roxellana
ENSGAGG00000018983	PUM3	99	72.952	ENSSBOG00000028066	PUM3	100	72.952	Saimiri_boliviensis_boliviensis
ENSGAGG00000018983	PUM3	99	70.988	ENSSHAG00000003730	PUM3	100	70.988	Sarcophilus_harrisii
ENSGAGG00000018983	PUM3	97	64.715	ENSSFOG00015018778	pum3	96	64.821	Scleropages_formosus
ENSGAGG00000018983	PUM3	85	62.264	ENSSMAG00000013236	pum3	99	55.982	Scophthalmus_maximus
ENSGAGG00000018983	PUM3	98	56.752	ENSSDUG00000001887	pum3	94	57.325	Seriola_dumerili
ENSGAGG00000018983	PUM3	96	58.194	ENSSLDG00000015766	pum3	95	57.006	Seriola_lalandi_dorsalis
ENSGAGG00000018983	PUM3	97	70.130	ENSSARG00000000579	PUM3	99	70.130	Sorex_araneus
ENSGAGG00000018983	PUM3	99	78.699	ENSSPUG00000001707	PUM3	99	78.831	Sphenodon_punctatus
ENSGAGG00000018983	PUM3	97	58.347	ENSSPAG00000003976	pum3	97	56.872	Stegastes_partitus
ENSGAGG00000018983	PUM3	98	73.667	ENSSSCG00000005227	PUM3	99	72.643	Sus_scrofa
ENSGAGG00000018983	PUM3	99	80.442	ENSTGUG00000005339	PUM3	100	80.442	Taeniopygia_guttata
ENSGAGG00000018983	PUM3	99	55.136	ENSTRUG00000004074	pum3	99	54.683	Takifugu_rubripes
ENSGAGG00000018983	PUM3	92	60.627	ENSTNIG00000010325	pum3	99	58.158	Tetraodon_nigroviridis
ENSGAGG00000018983	PUM3	85	59.470	ENSTBEG00000013058	PUM3	85	59.891	Tupaia_belangeri
ENSGAGG00000018983	PUM3	99	66.188	ENSTTRG00000001062	PUM3	96	65.533	Tursiops_truncatus
ENSGAGG00000018983	PUM3	99	65.550	ENSUMAG00000018443	PUM3	99	71.321	Ursus_maritimus
ENSGAGG00000018983	PUM3	98	73.990	ENSVPAG00000010766	PUM3	99	72.798	Vicugna_pacos
ENSGAGG00000018983	PUM3	98	73.387	ENSVVUG00000006527	PUM3	99	72.334	Vulpes_vulpes
ENSGAGG00000018983	PUM3	99	60.835	ENSXETG00000011707	pum3	98	60.563	Xenopus_tropicalis
ENSGAGG00000018983	PUM3	97	55.025	ENSXCOG00000006725	pum3	98	54.860	Xiphophorus_couchianus
ENSGAGG00000018983	PUM3	97	55.678	ENSXMAG00000002926	pum3	99	55.678	Xiphophorus_maculatus