EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000019133 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 17928 bases
Position: chrPPEB01000720.1:420780-438707
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000026213	RtcB	PF01139.17	1.7e-131	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000029810	RTCB-201	3269	-	ENSGAGP00000026213	481 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000019133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000019133's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000019133	RTCB	98	95.957	ENSG00000100220	RTCB	93	95.957	Homo_sapiens
ENSGAGG00000019133	RTCB	98	92.128	ENSAPOG00000006040	rtcb	93	92.128	Acanthochromis_polyacanthus
ENSGAGG00000019133	RTCB	98	95.745	ENSAMEG00000016152	RTCB	93	95.745	Ailuropoda_melanoleuca
ENSGAGG00000019133	RTCB	98	87.872	ENSACIG00000009083	rtcb	93	87.872	Amphilophus_citrinellus
ENSGAGG00000019133	RTCB	98	92.553	ENSAOCG00000005662	rtcb	92	94.353	Amphiprion_ocellaris
ENSGAGG00000019133	RTCB	94	92.053	ENSAPEG00000024653	rtcb	96	92.053	Amphiprion_percula
ENSGAGG00000019133	RTCB	98	92.553	ENSAPEG00000024701	rtcb	93	92.553	Amphiprion_percula
ENSGAGG00000019133	RTCB	98	93.191	ENSATEG00000000618	rtcb	93	93.191	Anabas_testudineus
ENSGAGG00000019133	RTCB	98	92.769	ENSACAG00000014817	RTCB	93	92.769	Anolis_carolinensis
ENSGAGG00000019133	RTCB	69	80.909	ENSANAG00000023724	-	75	80.909	Aotus_nancymaae
ENSGAGG00000019133	RTCB	98	80.213	ENSANAG00000018191	-	85	80.213	Aotus_nancymaae
ENSGAGG00000019133	RTCB	98	92.340	ENSACLG00000008367	rtcb	93	92.340	Astatotilapia_calliptera
ENSGAGG00000019133	RTCB	98	92.766	ENSAMXG00000042320	rtcb	93	92.766	Astyanax_mexicanus
ENSGAGG00000019133	RTCB	98	95.745	ENSBTAG00000011070	RTCB	93	95.745	Bos_taurus
ENSGAGG00000019133	RTCB	98	71.702	WBGene00008877	rtcb-1	93	71.702	Caenorhabditis_elegans
ENSGAGG00000019133	RTCB	98	95.745	ENSCJAG00000006128	RTCB	93	95.745	Callithrix_jacchus
ENSGAGG00000019133	RTCB	98	91.489	ENSCAFG00000010789	-	93	91.489	Canis_familiaris
ENSGAGG00000019133	RTCB	98	95.745	ENSCAFG00000001785	RTCB	93	95.745	Canis_familiaris
ENSGAGG00000019133	RTCB	91	91.818	ENSCAFG00020018953	-	99	91.818	Canis_lupus_dingo
ENSGAGG00000019133	RTCB	98	95.745	ENSCAFG00020004890	-	93	95.745	Canis_lupus_dingo
ENSGAGG00000019133	RTCB	98	95.957	ENSCHIG00000027009	-	93	95.957	Capra_hircus
ENSGAGG00000019133	RTCB	98	95.957	ENSTSYG00000012320	RTCB	93	95.957	Carlito_syrichta
ENSGAGG00000019133	RTCB	98	92.751	ENSCAPG00000011647	RTCB	93	92.751	Cavia_aperea
ENSGAGG00000019133	RTCB	98	95.745	ENSCCAG00000000618	RTCB	93	95.745	Cebus_capucinus
ENSGAGG00000019133	RTCB	98	95.745	ENSCATG00000033424	RTCB	93	95.745	Cercocebus_atys
ENSGAGG00000019133	RTCB	98	95.745	ENSCLAG00000007997	RTCB	93	95.745	Chinchilla_lanigera
ENSGAGG00000019133	RTCB	98	95.532	ENSCSAG00000008351	RTCB	93	95.532	Chlorocebus_sabaeus
ENSGAGG00000019133	RTCB	98	80.426	ENSCHOG00000009123	RTCB	93	80.426	Choloepus_hoffmanni
ENSGAGG00000019133	RTCB	98	98.936	ENSCPBG00000023184	RTCB	93	98.936	Chrysemys_picta_bellii
ENSGAGG00000019133	RTCB	98	80.638	ENSCING00000003830	-	93	80.638	Ciona_intestinalis
ENSGAGG00000019133	RTCB	98	80.851	ENSCSAVG00000008124	-	92	80.851	Ciona_savignyi
ENSGAGG00000019133	RTCB	99	94.958	ENSCANG00000001891	RTCB	98	94.958	Colobus_angolensis_palliatus
ENSGAGG00000019133	RTCB	98	95.957	ENSCGRG00001011173	Rtcb	93	95.957	Cricetulus_griseus_chok1gshd
ENSGAGG00000019133	RTCB	91	97.248	ENSCGRG00000009587	-	89	97.248	Cricetulus_griseus_crigri
ENSGAGG00000019133	RTCB	98	92.128	ENSCSEG00000003986	rtcb	93	92.128	Cynoglossus_semilaevis
ENSGAGG00000019133	RTCB	86	93.447	ENSCVAG00000000569	rtcb	94	93.447	Cyprinodon_variegatus
ENSGAGG00000019133	RTCB	98	92.766	ENSDARG00000101047	rtcb	93	92.766	Danio_rerio
ENSGAGG00000019133	RTCB	84	92.629	ENSDNOG00000012425	RTCB	99	92.629	Dasypus_novemcinctus
ENSGAGG00000019133	RTCB	98	96.170	ENSDORG00000010855	Rtcb	93	96.170	Dipodomys_ordii
ENSGAGG00000019133	RTCB	97	84.402	FBgn0032781	RtcB	92	84.402	Drosophila_melanogaster
ENSGAGG00000019133	RTCB	98	88.723	ENSETEG00000001988	RTCB	93	88.723	Echinops_telfairi
ENSGAGG00000019133	RTCB	98	83.830	ENSEBUG00000014235	rtcb	93	83.830	Eptatretus_burgeri
ENSGAGG00000019133	RTCB	98	96.170	ENSEASG00005019059	RTCB	93	96.170	Equus_asinus_asinus
ENSGAGG00000019133	RTCB	98	96.170	ENSECAG00000023998	RTCB	93	96.170	Equus_caballus
ENSGAGG00000019133	RTCB	77	97.574	ENSEEUG00000006251	RTCB	83	97.574	Erinaceus_europaeus
ENSGAGG00000019133	RTCB	98	81.174	ENSELUG00000009275	rtcb	93	81.174	Esox_lucius
ENSGAGG00000019133	RTCB	98	95.957	ENSFCAG00000026480	RTCB	93	95.957	Felis_catus
ENSGAGG00000019133	RTCB	98	96.809	ENSFALG00000013334	RTCB	93	96.809	Ficedula_albicollis
ENSGAGG00000019133	RTCB	98	95.745	ENSFDAG00000018150	RTCB	93	95.745	Fukomys_damarensis
ENSGAGG00000019133	RTCB	98	93.404	ENSFHEG00000009595	rtcb	93	93.404	Fundulus_heteroclitus
ENSGAGG00000019133	RTCB	98	90.851	ENSGMOG00000018882	rtcb	93	90.851	Gadus_morhua
ENSGAGG00000019133	RTCB	98	97.021	ENSGALG00000012611	RTCB	93	97.021	Gallus_gallus
ENSGAGG00000019133	RTCB	98	92.979	ENSGAFG00000004198	rtcb	93	92.979	Gambusia_affinis
ENSGAGG00000019133	RTCB	98	92.553	ENSGACG00000000586	rtcb	93	92.553	Gasterosteus_aculeatus
ENSGAGG00000019133	RTCB	98	95.957	ENSGGOG00000011402	RTCB	93	95.957	Gorilla_gorilla
ENSGAGG00000019133	RTCB	98	92.340	ENSHBUG00000020571	rtcb	93	92.340	Haplochromis_burtoni
ENSGAGG00000019133	RTCB	91	67.580	ENSHGLG00000001066	-	91	67.580	Heterocephalus_glaber_female
ENSGAGG00000019133	RTCB	98	95.745	ENSHGLG00000004492	RTCB	93	95.745	Heterocephalus_glaber_female
ENSGAGG00000019133	RTCB	98	95.745	ENSHGLG00100008965	RTCB	93	95.745	Heterocephalus_glaber_male
ENSGAGG00000019133	RTCB	98	91.102	ENSHCOG00000006450	rtcb	93	91.102	Hippocampus_comes
ENSGAGG00000019133	RTCB	98	93.617	ENSIPUG00000015443	rtcb	93	93.617	Ictalurus_punctatus
ENSGAGG00000019133	RTCB	98	95.532	ENSSTOG00000003878	RTCB	93	95.532	Ictidomys_tridecemlineatus
ENSGAGG00000019133	RTCB	98	95.745	ENSJJAG00000010667	Rtcb	93	95.745	Jaculus_jaculus
ENSGAGG00000019133	RTCB	98	92.766	ENSKMAG00000013178	rtcb	93	92.766	Kryptolebias_marmoratus
ENSGAGG00000019133	RTCB	98	93.404	ENSLBEG00000010566	RTCB	93	93.404	Labrus_bergylta
ENSGAGG00000019133	RTCB	98	92.340	ENSLBEG00000000214	rtcb	93	92.340	Labrus_bergylta
ENSGAGG00000019133	RTCB	98	95.745	ENSLACG00000013033	RTCB	93	95.745	Latimeria_chalumnae
ENSGAGG00000019133	RTCB	98	93.830	ENSLOCG00000016515	rtcb	93	93.830	Lepisosteus_oculatus
ENSGAGG00000019133	RTCB	98	95.745	ENSLAFG00000002082	RTCB	93	95.745	Loxodonta_africana
ENSGAGG00000019133	RTCB	98	95.532	ENSMFAG00000034419	RTCB	93	95.532	Macaca_fascicularis
ENSGAGG00000019133	RTCB	98	95.532	ENSMMUG00000006720	RTCB	93	95.532	Macaca_mulatta
ENSGAGG00000019133	RTCB	98	95.532	ENSMNEG00000040669	RTCB	93	95.532	Macaca_nemestrina
ENSGAGG00000019133	RTCB	98	95.745	ENSMLEG00000040505	RTCB	93	95.745	Mandrillus_leucophaeus
ENSGAGG00000019133	RTCB	98	92.569	ENSMAMG00000020676	rtcb	93	92.553	Mastacembelus_armatus
ENSGAGG00000019133	RTCB	98	92.340	ENSMZEG00005018942	rtcb	93	92.340	Maylandia_zebra
ENSGAGG00000019133	RTCB	98	96.610	ENSMGAG00000012805	RTCB	93	96.610	Meleagris_gallopavo
ENSGAGG00000019133	RTCB	55	100.000	ENSMAUG00000008301	Rtcb	88	100.000	Mesocricetus_auratus
ENSGAGG00000019133	RTCB	98	95.745	ENSMICG00000013303	-	93	95.745	Microcebus_murinus
ENSGAGG00000019133	RTCB	98	75.957	ENSMICG00000036677	-	92	75.957	Microcebus_murinus
ENSGAGG00000019133	RTCB	98	95.957	ENSMOCG00000002440	Rtcb	93	95.957	Microtus_ochrogaster
ENSGAGG00000019133	RTCB	98	92.979	ENSMMOG00000005987	rtcb	93	92.979	Mola_mola
ENSGAGG00000019133	RTCB	98	96.809	ENSMODG00000001414	RTCB	93	96.809	Monodelphis_domestica
ENSGAGG00000019133	RTCB	98	92.766	ENSMALG00000007603	rtcb	93	92.766	Monopterus_albus
ENSGAGG00000019133	RTCB	98	95.957	MGP_CAROLIEiJ_G0015689	Rtcb	93	95.957	Mus_caroli
ENSGAGG00000019133	RTCB	98	95.957	ENSMUSG00000001783	Rtcb	93	95.957	Mus_musculus
ENSGAGG00000019133	RTCB	98	95.957	MGP_PahariEiJ_G0031396	Rtcb	93	95.957	Mus_pahari
ENSGAGG00000019133	RTCB	98	95.957	MGP_SPRETEiJ_G0016507	Rtcb	93	95.957	Mus_spretus
ENSGAGG00000019133	RTCB	98	95.745	ENSMPUG00000012285	RTCB	93	95.745	Mustela_putorius_furo
ENSGAGG00000019133	RTCB	98	93.658	ENSMLUG00000007803	RTCB	93	93.658	Myotis_lucifugus
ENSGAGG00000019133	RTCB	71	100.000	ENSNGAG00000005093	Rtcb	90	100.000	Nannospalax_galili
ENSGAGG00000019133	RTCB	98	92.553	ENSNBRG00000017202	rtcb	93	92.553	Neolamprologus_brichardi
ENSGAGG00000019133	RTCB	98	95.957	ENSNLEG00000004960	RTCB	93	95.957	Nomascus_leucogenys
ENSGAGG00000019133	RTCB	98	69.362	ENSMEUG00000007809	-	93	69.362	Notamacropus_eugenii
ENSGAGG00000019133	RTCB	77	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSGAGG00000019133	RTCB	97	63.034	ENSODEG00000005042	-	91	63.034	Octodon_degus
ENSGAGG00000019133	RTCB	79	100.000	ENSODEG00000013033	-	91	100.000	Octodon_degus
ENSGAGG00000019133	RTCB	98	93.830	ENSONIG00000007474	rtcb	97	91.376	Oreochromis_niloticus
ENSGAGG00000019133	RTCB	98	96.383	ENSOANG00000005524	RTCB	93	96.383	Ornithorhynchus_anatinus
ENSGAGG00000019133	RTCB	98	95.763	ENSOCUG00000008270	RTCB	96	95.763	Oryctolagus_cuniculus
ENSGAGG00000019133	RTCB	98	93.404	ENSORLG00000020093	rtcb	93	93.404	Oryzias_latipes
ENSGAGG00000019133	RTCB	98	93.404	ENSORLG00020003706	rtcb	93	93.404	Oryzias_latipes_hni
ENSGAGG00000019133	RTCB	98	93.617	ENSORLG00015002968	rtcb	93	93.617	Oryzias_latipes_hsok
ENSGAGG00000019133	RTCB	98	92.979	ENSOMEG00000021278	rtcb	93	92.979	Oryzias_melastigma
ENSGAGG00000019133	RTCB	98	95.319	ENSOGAG00000001425	RTCB	93	95.319	Otolemur_garnettii
ENSGAGG00000019133	RTCB	98	95.957	ENSOARG00000018008	RTCB	93	95.957	Ovis_aries
ENSGAGG00000019133	RTCB	98	95.957	ENSPPAG00000028667	RTCB	93	95.957	Pan_paniscus
ENSGAGG00000019133	RTCB	98	95.957	ENSPPRG00000004038	RTCB	93	95.957	Panthera_pardus
ENSGAGG00000019133	RTCB	91	92.273	ENSPTIG00000020499	RTCB	90	93.409	Panthera_tigris_altaica
ENSGAGG00000019133	RTCB	98	95.957	ENSPTRG00000014287	RTCB	93	95.957	Pan_troglodytes
ENSGAGG00000019133	RTCB	98	95.532	ENSPANG00000016035	RTCB	93	95.532	Papio_anubis
ENSGAGG00000019133	RTCB	98	92.128	ENSPKIG00000001881	rtcb	93	92.128	Paramormyrops_kingsleyae
ENSGAGG00000019133	RTCB	88	99.294	ENSPSIG00000011690	RTCB	92	99.294	Pelodiscus_sinensis
ENSGAGG00000019133	RTCB	98	92.340	ENSPMGG00000016672	rtcb	93	92.340	Periophthalmus_magnuspinnatus
ENSGAGG00000019133	RTCB	98	95.957	ENSPEMG00000019548	Rtcb	93	95.957	Peromyscus_maniculatus_bairdii
ENSGAGG00000019133	RTCB	98	90.000	ENSPMAG00000005657	rtcb	93	90.000	Petromyzon_marinus
ENSGAGG00000019133	RTCB	98	96.383	ENSPCIG00000009467	RTCB	93	96.383	Phascolarctos_cinereus
ENSGAGG00000019133	RTCB	98	93.404	ENSPFOG00000003058	rtcb	93	93.404	Poecilia_formosa
ENSGAGG00000019133	RTCB	98	93.404	ENSPLAG00000017663	rtcb	93	93.404	Poecilia_latipinna
ENSGAGG00000019133	RTCB	98	93.404	ENSPMEG00000006227	rtcb	93	93.404	Poecilia_mexicana
ENSGAGG00000019133	RTCB	98	93.191	ENSPREG00000018467	rtcb	93	93.191	Poecilia_reticulata
ENSGAGG00000019133	RTCB	98	95.957	ENSPPYG00000011752	RTCB	93	95.957	Pongo_abelii
ENSGAGG00000019133	RTCB	98	78.814	ENSPCAG00000013641	RTCB	100	78.814	Procavia_capensis
ENSGAGG00000019133	RTCB	98	95.532	ENSPCOG00000017243	RTCB	93	95.532	Propithecus_coquereli
ENSGAGG00000019133	RTCB	98	94.894	ENSPVAG00000002380	RTCB	100	94.894	Pteropus_vampyrus
ENSGAGG00000019133	RTCB	98	92.340	ENSPNYG00000022760	rtcb	93	92.340	Pundamilia_nyererei
ENSGAGG00000019133	RTCB	98	93.617	ENSPNAG00000009209	rtcb	93	93.617	Pygocentrus_nattereri
ENSGAGG00000019133	RTCB	98	95.957	ENSRNOG00000004813	Rtcb	93	95.957	Rattus_norvegicus
ENSGAGG00000019133	RTCB	98	86.200	ENSRBIG00000042090	RTCB	93	86.200	Rhinopithecus_bieti
ENSGAGG00000019133	RTCB	98	91.277	ENSSBOG00000020085	-	93	91.277	Saimiri_boliviensis_boliviensis
ENSGAGG00000019133	RTCB	91	97.494	ENSSHAG00000016277	RTCB	93	97.494	Sarcophilus_harrisii
ENSGAGG00000019133	RTCB	98	92.340	ENSSFOG00015011572	RTCB	93	92.340	Scleropages_formosus
ENSGAGG00000019133	RTCB	98	92.340	ENSSFOG00015000763	rtcb	93	92.340	Scleropages_formosus
ENSGAGG00000019133	RTCB	99	90.417	ENSSMAG00000005096	rtcb	93	89.574	Scophthalmus_maximus
ENSGAGG00000019133	RTCB	98	92.128	ENSSDUG00000012605	rtcb	93	92.128	Seriola_dumerili
ENSGAGG00000019133	RTCB	98	92.128	ENSSLDG00000019458	rtcb	93	92.128	Seriola_lalandi_dorsalis
ENSGAGG00000019133	RTCB	62	71.906	ENSSARG00000004799	-	63	71.906	Sorex_araneus
ENSGAGG00000019133	RTCB	98	96.170	ENSSPUG00000012814	RTCB	93	96.170	Sphenodon_punctatus
ENSGAGG00000019133	RTCB	98	92.553	ENSSPAG00000004623	rtcb	93	92.553	Stegastes_partitus
ENSGAGG00000019133	RTCB	98	95.957	ENSSSCG00000000158	RTCB	93	95.957	Sus_scrofa
ENSGAGG00000019133	RTCB	98	96.809	ENSTGUG00000010947	RTCB	93	96.809	Taeniopygia_guttata
ENSGAGG00000019133	RTCB	88	94.118	ENSTRUG00000009880	rtcb	100	86.747	Takifugu_rubripes
ENSGAGG00000019133	RTCB	98	91.702	ENSTNIG00000002484	rtcb	93	91.702	Tetraodon_nigroviridis
ENSGAGG00000019133	RTCB	98	81.915	ENSTBEG00000004418	RTCB	93	81.915	Tupaia_belangeri
ENSGAGG00000019133	RTCB	98	95.745	ENSTTRG00000006417	RTCB	100	95.745	Tursiops_truncatus
ENSGAGG00000019133	RTCB	98	95.745	ENSUAMG00000022792	RTCB	93	95.745	Ursus_americanus
ENSGAGG00000019133	RTCB	98	95.745	ENSUMAG00000017225	RTCB	93	95.745	Ursus_maritimus
ENSGAGG00000019133	RTCB	98	95.957	ENSVPAG00000005375	RTCB	93	95.957	Vicugna_pacos
ENSGAGG00000019133	RTCB	98	95.745	ENSVVUG00000023408	RTCB	92	97.579	Vulpes_vulpes
ENSGAGG00000019133	RTCB	98	94.255	ENSXETG00000011523	rtcb	93	94.255	Xenopus_tropicalis
ENSGAGG00000019133	RTCB	98	92.979	ENSXMAG00000002855	rtcb	93	92.979	Xiphophorus_maculatus