EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000019192 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 5897 bases
Position: chrPPEB01006193.1:46427-52323
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000026317	EXOSC1	PF10447.9	4e-14	1	1
ENSGAGP00000026317	ECR1_N	PF14382.6	7.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000029924	EXOSC1-201	1215	-	ENSGAGP00000026317	195 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000019192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000019192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000019192	EXOSC1	100	85.128	ENSG00000171311	EXOSC1	100	85.128	Homo_sapiens
ENSGAGG00000019192	EXOSC1	98	77.487	ENSAPOG00000007822	exosc1	98	77.487	Acanthochromis_polyacanthus
ENSGAGG00000019192	EXOSC1	100	84.615	ENSAMEG00000000129	EXOSC1	100	84.615	Ailuropoda_melanoleuca
ENSGAGG00000019192	EXOSC1	94	77.174	ENSACIG00000018956	exosc1	90	77.174	Amphilophus_citrinellus
ENSGAGG00000019192	EXOSC1	98	77.487	ENSAOCG00000010699	exosc1	98	77.487	Amphiprion_ocellaris
ENSGAGG00000019192	EXOSC1	92	68.156	ENSAPEG00000012690	exosc1	96	68.156	Amphiprion_percula
ENSGAGG00000019192	EXOSC1	98	76.963	ENSATEG00000018683	exosc1	98	76.963	Anabas_testudineus
ENSGAGG00000019192	EXOSC1	99	84.974	ENSACAG00000002101	EXOSC1	99	84.974	Anolis_carolinensis
ENSGAGG00000019192	EXOSC1	100	85.128	ENSANAG00000034669	EXOSC1	100	85.128	Aotus_nancymaae
ENSGAGG00000019192	EXOSC1	98	76.963	ENSACLG00000021243	exosc1	98	76.963	Astatotilapia_calliptera
ENSGAGG00000019192	EXOSC1	98	79.581	ENSAMXG00000011116	exosc1	98	79.581	Astyanax_mexicanus
ENSGAGG00000019192	EXOSC1	100	85.128	ENSBTAG00000012699	EXOSC1	100	85.128	Bos_taurus
ENSGAGG00000019192	EXOSC1	92	34.043	WBGene00012966	exos-1	90	34.043	Caenorhabditis_elegans
ENSGAGG00000019192	EXOSC1	100	85.641	ENSCJAG00000016586	EXOSC1	100	85.641	Callithrix_jacchus
ENSGAGG00000019192	EXOSC1	100	84.103	ENSCAFG00000009068	EXOSC1	94	84.103	Canis_familiaris
ENSGAGG00000019192	EXOSC1	100	84.103	ENSCAFG00020006002	EXOSC1	94	84.103	Canis_lupus_dingo
ENSGAGG00000019192	EXOSC1	100	85.128	ENSCHIG00000015253	EXOSC1	100	85.128	Capra_hircus
ENSGAGG00000019192	EXOSC1	100	84.615	ENSTSYG00000000760	EXOSC1	100	84.615	Carlito_syrichta
ENSGAGG00000019192	EXOSC1	100	84.615	ENSCPOG00000001173	EXOSC1	100	84.615	Cavia_porcellus
ENSGAGG00000019192	EXOSC1	100	46.701	ENSCCAG00000023986	EXOSC1	100	46.701	Cebus_capucinus
ENSGAGG00000019192	EXOSC1	100	85.128	ENSCATG00000034114	EXOSC1	100	85.128	Cercocebus_atys
ENSGAGG00000019192	EXOSC1	100	85.128	ENSCLAG00000002463	EXOSC1	100	85.128	Chinchilla_lanigera
ENSGAGG00000019192	EXOSC1	100	84.615	ENSCSAG00000005870	EXOSC1	100	84.615	Chlorocebus_sabaeus
ENSGAGG00000019192	EXOSC1	96	72.193	ENSCHOG00000006477	EXOSC1	100	72.193	Choloepus_hoffmanni
ENSGAGG00000019192	EXOSC1	54	100.000	ENSCPBG00000011949	EXOSC1	88	100.000	Chrysemys_picta_bellii
ENSGAGG00000019192	EXOSC1	95	53.476	ENSCING00000022734	-	89	53.476	Ciona_intestinalis
ENSGAGG00000019192	EXOSC1	95	55.615	ENSCSAVG00000010865	-	95	55.615	Ciona_savignyi
ENSGAGG00000019192	EXOSC1	100	85.128	ENSCANG00000034159	EXOSC1	100	85.128	Colobus_angolensis_palliatus
ENSGAGG00000019192	EXOSC1	100	86.154	ENSCGRG00001000335	Exosc1	100	86.154	Cricetulus_griseus_chok1gshd
ENSGAGG00000019192	EXOSC1	100	86.154	ENSCGRG00000011602	Exosc1	100	86.154	Cricetulus_griseus_crigri
ENSGAGG00000019192	EXOSC1	98	65.445	ENSCSEG00000007895	exosc1	95	65.445	Cynoglossus_semilaevis
ENSGAGG00000019192	EXOSC1	98	73.822	ENSCVAG00000016748	exosc1	98	73.822	Cyprinodon_variegatus
ENSGAGG00000019192	EXOSC1	98	80.105	ENSDARG00000059841	exosc1	98	80.105	Danio_rerio
ENSGAGG00000019192	EXOSC1	75	83.108	ENSDNOG00000007983	EXOSC1	100	83.108	Dasypus_novemcinctus
ENSGAGG00000019192	EXOSC1	100	84.615	ENSDORG00000016528	Exosc1	100	84.615	Dipodomys_ordii
ENSGAGG00000019192	EXOSC1	94	44.974	FBgn0032346	Csl4	92	44.974	Drosophila_melanogaster
ENSGAGG00000019192	EXOSC1	100	84.615	ENSETEG00000002469	-	100	84.615	Echinops_telfairi
ENSGAGG00000019192	EXOSC1	99	64.286	ENSEBUG00000008164	exosc1	98	64.286	Eptatretus_burgeri
ENSGAGG00000019192	EXOSC1	100	77.436	ENSEASG00005008684	EXOSC1	100	77.436	Equus_asinus_asinus
ENSGAGG00000019192	EXOSC1	61	67.227	ENSECAG00000010621	EXOSC1	71	67.227	Equus_caballus
ENSGAGG00000019192	EXOSC1	100	84.103	ENSEEUG00000005647	EXOSC1	100	84.103	Erinaceus_europaeus
ENSGAGG00000019192	EXOSC1	94	77.717	ENSELUG00000017369	exosc1	97	61.979	Esox_lucius
ENSGAGG00000019192	EXOSC1	100	84.615	ENSFCAG00000040563	EXOSC1	94	84.615	Felis_catus
ENSGAGG00000019192	EXOSC1	100	85.641	ENSFALG00000008450	EXOSC1	100	85.641	Ficedula_albicollis
ENSGAGG00000019192	EXOSC1	100	85.641	ENSFDAG00000000846	EXOSC1	100	85.641	Fukomys_damarensis
ENSGAGG00000019192	EXOSC1	98	73.822	ENSFHEG00000009154	exosc1	98	73.822	Fundulus_heteroclitus
ENSGAGG00000019192	EXOSC1	98	76.440	ENSGMOG00000008993	exosc1	98	76.440	Gadus_morhua
ENSGAGG00000019192	EXOSC1	100	73.333	ENSGALG00000039917	EXOSC1	100	90.411	Gallus_gallus
ENSGAGG00000019192	EXOSC1	98	73.298	ENSGAFG00000010265	exosc1	94	73.298	Gambusia_affinis
ENSGAGG00000019192	EXOSC1	98	78.534	ENSGACG00000018936	exosc1	98	78.534	Gasterosteus_aculeatus
ENSGAGG00000019192	EXOSC1	100	73.333	ENSGGOG00000003099	EXOSC1	100	73.333	Gorilla_gorilla
ENSGAGG00000019192	EXOSC1	98	76.963	ENSHBUG00000017857	exosc1	98	76.963	Haplochromis_burtoni
ENSGAGG00000019192	EXOSC1	100	85.128	ENSHGLG00000016927	EXOSC1	100	85.128	Heterocephalus_glaber_female
ENSGAGG00000019192	EXOSC1	100	85.128	ENSHGLG00100012208	EXOSC1	100	85.128	Heterocephalus_glaber_male
ENSGAGG00000019192	EXOSC1	98	75.916	ENSHCOG00000019882	exosc1	98	75.916	Hippocampus_comes
ENSGAGG00000019192	EXOSC1	98	78.534	ENSIPUG00000007685	exosc1	98	78.534	Ictalurus_punctatus
ENSGAGG00000019192	EXOSC1	100	84.615	ENSSTOG00000006615	EXOSC1	100	84.615	Ictidomys_tridecemlineatus
ENSGAGG00000019192	EXOSC1	63	68.033	ENSSTOG00000029860	-	93	68.033	Ictidomys_tridecemlineatus
ENSGAGG00000019192	EXOSC1	100	84.615	ENSJJAG00000013311	Exosc1	100	84.615	Jaculus_jaculus
ENSGAGG00000019192	EXOSC1	98	75.916	ENSKMAG00000001202	exosc1	81	75.916	Kryptolebias_marmoratus
ENSGAGG00000019192	EXOSC1	98	76.963	ENSLBEG00000011448	exosc1	98	76.963	Labrus_bergylta
ENSGAGG00000019192	EXOSC1	98	58.376	ENSLOCG00000003776	exosc1	98	58.376	Lepisosteus_oculatus
ENSGAGG00000019192	EXOSC1	100	85.128	ENSLAFG00000015983	EXOSC1	100	85.128	Loxodonta_africana
ENSGAGG00000019192	EXOSC1	100	85.128	ENSMFAG00000001493	EXOSC1	100	85.128	Macaca_fascicularis
ENSGAGG00000019192	EXOSC1	100	85.128	ENSMMUG00000020028	EXOSC1	100	79.397	Macaca_mulatta
ENSGAGG00000019192	EXOSC1	100	85.128	ENSMNEG00000029816	EXOSC1	100	85.128	Macaca_nemestrina
ENSGAGG00000019192	EXOSC1	100	80.513	ENSMLEG00000027643	EXOSC1	100	80.513	Mandrillus_leucophaeus
ENSGAGG00000019192	EXOSC1	98	76.963	ENSMAMG00000012200	exosc1	98	76.963	Mastacembelus_armatus
ENSGAGG00000019192	EXOSC1	98	76.963	ENSMZEG00005007042	exosc1	98	76.963	Maylandia_zebra
ENSGAGG00000019192	EXOSC1	100	75.385	ENSMAUG00000020462	-	100	75.385	Mesocricetus_auratus
ENSGAGG00000019192	EXOSC1	100	84.615	ENSMICG00000007664	EXOSC1	92	84.615	Microcebus_murinus
ENSGAGG00000019192	EXOSC1	100	86.154	ENSMOCG00000006004	-	100	86.154	Microtus_ochrogaster
ENSGAGG00000019192	EXOSC1	96	80.952	ENSMOCG00000017124	-	96	80.952	Microtus_ochrogaster
ENSGAGG00000019192	EXOSC1	99	56.701	ENSMMOG00000021403	exosc1	99	56.701	Mola_mola
ENSGAGG00000019192	EXOSC1	100	82.653	ENSMODG00000004213	EXOSC1	100	82.653	Monodelphis_domestica
ENSGAGG00000019192	EXOSC1	94	78.261	ENSMALG00000007061	exosc1	92	78.261	Monopterus_albus
ENSGAGG00000019192	EXOSC1	100	85.641	MGP_CAROLIEiJ_G0022959	Exosc1	100	85.641	Mus_caroli
ENSGAGG00000019192	EXOSC1	100	85.641	ENSMUSG00000034321	Exosc1	100	85.641	Mus_musculus
ENSGAGG00000019192	EXOSC1	100	86.154	MGP_PahariEiJ_G0014449	Exosc1	100	86.154	Mus_pahari
ENSGAGG00000019192	EXOSC1	100	85.641	MGP_SPRETEiJ_G0023880	Exosc1	100	85.641	Mus_spretus
ENSGAGG00000019192	EXOSC1	100	84.615	ENSMPUG00000017044	EXOSC1	100	84.615	Mustela_putorius_furo
ENSGAGG00000019192	EXOSC1	100	84.103	ENSMLUG00000009228	EXOSC1	100	84.103	Myotis_lucifugus
ENSGAGG00000019192	EXOSC1	100	86.154	ENSNGAG00000022033	Exosc1	100	86.154	Nannospalax_galili
ENSGAGG00000019192	EXOSC1	98	59.162	ENSNBRG00000024007	exosc1	97	59.162	Neolamprologus_brichardi
ENSGAGG00000019192	EXOSC1	100	84.615	ENSNLEG00000013872	EXOSC1	100	84.615	Nomascus_leucogenys
ENSGAGG00000019192	EXOSC1	59	78.261	ENSMEUG00000002246	EXOSC1	100	78.261	Notamacropus_eugenii
ENSGAGG00000019192	EXOSC1	100	86.154	ENSOPRG00000005065	EXOSC1	100	86.154	Ochotona_princeps
ENSGAGG00000019192	EXOSC1	100	85.641	ENSODEG00000016709	EXOSC1	100	85.641	Octodon_degus
ENSGAGG00000019192	EXOSC1	98	77.487	ENSONIG00000017683	exosc1	98	77.487	Oreochromis_niloticus
ENSGAGG00000019192	EXOSC1	59	87.826	ENSOANG00000006563	EXOSC1	98	85.484	Ornithorhynchus_anatinus
ENSGAGG00000019192	EXOSC1	100	81.026	ENSOCUG00000026461	-	100	81.026	Oryctolagus_cuniculus
ENSGAGG00000019192	EXOSC1	100	85.714	ENSOCUG00000011898	-	100	85.714	Oryctolagus_cuniculus
ENSGAGG00000019192	EXOSC1	98	75.521	ENSORLG00000011595	exosc1	98	75.521	Oryzias_latipes
ENSGAGG00000019192	EXOSC1	98	75.521	ENSORLG00020005831	exosc1	98	75.521	Oryzias_latipes_hni
ENSGAGG00000019192	EXOSC1	98	75.521	ENSORLG00015004317	exosc1	98	75.521	Oryzias_latipes_hsok
ENSGAGG00000019192	EXOSC1	98	61.780	ENSOMEG00000013907	exosc1	98	61.780	Oryzias_melastigma
ENSGAGG00000019192	EXOSC1	100	85.128	ENSOGAG00000016259	EXOSC1	100	85.128	Otolemur_garnettii
ENSGAGG00000019192	EXOSC1	100	84.615	ENSOARG00000010136	EXOSC1	100	84.615	Ovis_aries
ENSGAGG00000019192	EXOSC1	100	80.303	ENSPPAG00000039842	EXOSC1	100	80.303	Pan_paniscus
ENSGAGG00000019192	EXOSC1	100	84.615	ENSPPRG00000023366	EXOSC1	100	84.615	Panthera_pardus
ENSGAGG00000019192	EXOSC1	100	84.615	ENSPTIG00000017701	EXOSC1	100	84.615	Panthera_tigris_altaica
ENSGAGG00000019192	EXOSC1	100	85.128	ENSPTRG00000002808	EXOSC1	100	85.128	Pan_troglodytes
ENSGAGG00000019192	EXOSC1	100	85.128	ENSPANG00000021324	EXOSC1	100	85.128	Papio_anubis
ENSGAGG00000019192	EXOSC1	98	78.534	ENSPKIG00000016037	exosc1	98	78.534	Paramormyrops_kingsleyae
ENSGAGG00000019192	EXOSC1	77	88.079	ENSPSIG00000013571	EXOSC1	98	88.525	Pelodiscus_sinensis
ENSGAGG00000019192	EXOSC1	98	66.492	ENSPMGG00000014002	exosc1	98	66.492	Periophthalmus_magnuspinnatus
ENSGAGG00000019192	EXOSC1	100	86.154	ENSPEMG00000010710	-	100	86.154	Peromyscus_maniculatus_bairdii
ENSGAGG00000019192	EXOSC1	95	70.053	ENSPMAG00000000195	exosc1	95	70.053	Petromyzon_marinus
ENSGAGG00000019192	EXOSC1	100	83.077	ENSPCIG00000002210	EXOSC1	99	83.077	Phascolarctos_cinereus
ENSGAGG00000019192	EXOSC1	98	72.775	ENSPFOG00000006755	exosc1	94	72.775	Poecilia_formosa
ENSGAGG00000019192	EXOSC1	98	72.775	ENSPLAG00000005880	exosc1	98	72.775	Poecilia_latipinna
ENSGAGG00000019192	EXOSC1	98	72.775	ENSPMEG00000015598	exosc1	94	72.775	Poecilia_mexicana
ENSGAGG00000019192	EXOSC1	98	62.304	ENSPREG00000000405	exosc1	93	62.304	Poecilia_reticulata
ENSGAGG00000019192	EXOSC1	100	85.128	ENSPPYG00000002531	EXOSC1	100	85.128	Pongo_abelii
ENSGAGG00000019192	EXOSC1	100	84.103	ENSPCAG00000009135	EXOSC1	100	84.103	Procavia_capensis
ENSGAGG00000019192	EXOSC1	100	79.487	ENSPCOG00000027539	EXOSC1	100	79.487	Propithecus_coquereli
ENSGAGG00000019192	EXOSC1	100	84.615	ENSPVAG00000003372	EXOSC1	100	84.615	Pteropus_vampyrus
ENSGAGG00000019192	EXOSC1	98	76.963	ENSPNYG00000021745	exosc1	98	76.963	Pundamilia_nyererei
ENSGAGG00000019192	EXOSC1	98	78.534	ENSPNAG00000001944	exosc1	98	78.534	Pygocentrus_nattereri
ENSGAGG00000019192	EXOSC1	100	86.154	ENSRNOG00000048708	Exosc1	100	86.154	Rattus_norvegicus
ENSGAGG00000019192	EXOSC1	100	85.128	ENSRBIG00000035618	EXOSC1	100	85.128	Rhinopithecus_bieti
ENSGAGG00000019192	EXOSC1	100	85.128	ENSRROG00000032589	EXOSC1	92	85.128	Rhinopithecus_roxellana
ENSGAGG00000019192	EXOSC1	100	85.128	ENSSBOG00000000359	EXOSC1	100	85.128	Saimiri_boliviensis_boliviensis
ENSGAGG00000019192	EXOSC1	75	87.755	ENSSHAG00000018219	EXOSC1	100	87.755	Sarcophilus_harrisii
ENSGAGG00000019192	EXOSC1	98	78.010	ENSSFOG00015009069	exosc1	98	78.010	Scleropages_formosus
ENSGAGG00000019192	EXOSC1	97	74.211	ENSSFOG00015016289	-	98	74.211	Scleropages_formosus
ENSGAGG00000019192	EXOSC1	98	78.010	ENSSMAG00000003721	exosc1	98	78.010	Scophthalmus_maximus
ENSGAGG00000019192	EXOSC1	98	77.487	ENSSDUG00000002993	exosc1	98	77.487	Seriola_dumerili
ENSGAGG00000019192	EXOSC1	98	77.487	ENSSLDG00000025181	exosc1	98	77.487	Seriola_lalandi_dorsalis
ENSGAGG00000019192	EXOSC1	100	73.333	ENSSARG00000000162	EXOSC1	100	73.333	Sorex_araneus
ENSGAGG00000019192	EXOSC1	99	86.598	ENSSPUG00000012263	EXOSC1	99	86.598	Sphenodon_punctatus
ENSGAGG00000019192	EXOSC1	98	69.634	ENSSPAG00000016792	exosc1	82	69.634	Stegastes_partitus
ENSGAGG00000019192	EXOSC1	100	83.590	ENSSSCG00000010518	EXOSC1	91	83.590	Sus_scrofa
ENSGAGG00000019192	EXOSC1	98	83.333	ENSTGUG00000009692	EXOSC1	99	83.333	Taeniopygia_guttata
ENSGAGG00000019192	EXOSC1	97	70.370	ENSTRUG00000007706	exosc1	98	70.370	Takifugu_rubripes
ENSGAGG00000019192	EXOSC1	97	68.750	ENSTNIG00000014079	exosc1	97	68.750	Tetraodon_nigroviridis
ENSGAGG00000019192	EXOSC1	100	78.974	ENSTBEG00000006011	EXOSC1	100	78.974	Tupaia_belangeri
ENSGAGG00000019192	EXOSC1	94	84.783	ENSTTRG00000009887	EXOSC1	100	84.783	Tursiops_truncatus
ENSGAGG00000019192	EXOSC1	100	70.256	ENSUAMG00000010266	EXOSC1	100	70.256	Ursus_americanus
ENSGAGG00000019192	EXOSC1	100	70.256	ENSUMAG00000022002	EXOSC1	100	70.256	Ursus_maritimus
ENSGAGG00000019192	EXOSC1	100	84.103	ENSVVUG00000023192	EXOSC1	63	84.103	Vulpes_vulpes
ENSGAGG00000019192	EXOSC1	98	79.688	ENSXETG00000003434	exosc1	99	79.688	Xenopus_tropicalis
ENSGAGG00000019192	EXOSC1	62	81.667	ENSXCOG00000014499	exosc1	92	81.667	Xiphophorus_couchianus
ENSGAGG00000019192	EXOSC1	98	62.827	ENSXMAG00000023382	exosc1	93	62.827	Xiphophorus_maculatus