EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAGG00000019219 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Plus strand
Length
55724 bases
Position
chrPPEB01002709.1:144183-199906
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000026375KH_1PF00013.292.1e-6914
ENSGAGP00000026375KH_1PF00013.292.1e-6924
ENSGAGP00000026375KH_1PF00013.292.1e-6934
ENSGAGP00000026375KH_1PF00013.292.1e-6944
ENSGAGP00000026371KH_1PF00013.292.2e-6914
ENSGAGP00000026371KH_1PF00013.292.2e-6924
ENSGAGP00000026371KH_1PF00013.292.2e-6934
ENSGAGP00000026371KH_1PF00013.292.2e-6944
ENSGAGP00000026367KH_1PF00013.292.5e-6914
ENSGAGP00000026367KH_1PF00013.292.5e-6924
ENSGAGP00000026367KH_1PF00013.292.5e-6934
ENSGAGP00000026367KH_1PF00013.292.5e-6944
ENSGAGP00000026364KH_1PF00013.292.6e-6914
ENSGAGP00000026364KH_1PF00013.292.6e-6924
ENSGAGP00000026364KH_1PF00013.292.6e-6934
ENSGAGP00000026364KH_1PF00013.292.6e-6944
ENSGAGP00000026375KH_2PF07650.177.5e-2312
ENSGAGP00000026375KH_2PF07650.177.5e-2322
ENSGAGP00000026371KH_2PF07650.177.7e-2312
ENSGAGP00000026371KH_2PF07650.177.7e-2322
ENSGAGP00000026367KH_2PF07650.178.8e-2312
ENSGAGP00000026367KH_2PF07650.178.8e-2322
ENSGAGP00000026364KH_2PF07650.179e-2312
ENSGAGP00000026364KH_2PF07650.179e-2322
ENSGAGP00000026375DUF1897PF09005.101e-1412
ENSGAGP00000026375DUF1897PF09005.101e-1422
ENSGAGP00000026367DUF1897PF09005.101.2e-1412
ENSGAGP00000026367DUF1897PF09005.101.2e-1422
ENSGAGP00000026364DUF1897PF09005.101.3e-1412
ENSGAGP00000026364DUF1897PF09005.101.3e-1422
ENSGAGP00000026371DUF1897PF09005.101.7e-1112
ENSGAGP00000026371DUF1897PF09005.101.7e-1122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000029979-2534-ENSGAGP00000026367682 (aa)--
ENSGAGT00000029983-2474-ENSGAGP00000026371662 (aa)--
ENSGAGT00000029987-2471-ENSGAGP00000026375661 (aa)--
ENSGAGT00000029976-2183-ENSGAGP00000026364685 (aa)--
Gene Model
Click here to download ENSGAGG00000019219's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000019219's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAGG00000019219-9368.627ENSGAGG00000014090FUBP39164.678
ENSGAGG00000019219-6368.765ENSGAGG00000023246KHSRP6468.433
ENSGAGG00000019219-5037.500ENSGAGG00000010410PCBP29037.500
ENSGAGG00000019219-5236.765ENSGAGG00000009498NOVA25436.765
ENSGAGG00000019219-5539.726ENSGAGG00000022116PCBP46739.726
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000019219-9361.742ENSG00000088247KHSRP10072.414Homo_sapiens
ENSGAGG00000019219-7057.755ENSAPOG00000012989KHSRP6662.864Acanthochromis_polyacanthus
ENSGAGG00000019219-9355.832ENSAPOG00000009524khsrp7461.435Acanthochromis_polyacanthus
ENSGAGG00000019219-9260.911ENSAMEG00000006978KHSRP6366.744Ailuropoda_melanoleuca
ENSGAGG00000019219-9855.213ENSACIG00000009298khsrp6860.987Amphilophus_citrinellus
ENSGAGG00000019219-9755.652ENSAOCG00000010049khsrp6762.108Amphiprion_ocellaris
ENSGAGG00000019219-8253.571ENSAOCG00000010189KHSRP8362.014Amphiprion_ocellaris
ENSGAGG00000019219-7057.755ENSAPEG00000008575KHSRP6662.640Amphiprion_percula
ENSGAGG00000019219-9755.652ENSAPEG00000013411khsrp6762.108Amphiprion_percula
ENSGAGG00000019219-9851.339ENSATEG00000024744KHSRP6859.598Anabas_testudineus
ENSGAGG00000019219-9855.882ENSATEG00000019332khsrp6661.211Anabas_testudineus
ENSGAGG00000019219-9662.822ENSACAG00000015398KHSRP6167.431Anolis_carolinensis
ENSGAGG00000019219-8971.233ENSANAG00000027617KHSRP7764.203Aotus_nancymaae
ENSGAGG00000019219-9989.286ENSANAG00000004931-10090.799Aotus_nancymaae
ENSGAGG00000019219-9855.704ENSACLG00000020487khsrp6859.243Astatotilapia_calliptera
ENSGAGG00000019219-9553.040ENSACLG00000001424KHSRP6660.938Astatotilapia_calliptera
ENSGAGG00000019219-9655.376ENSAMXG00000036582khsrp6862.500Astyanax_mexicanus
ENSGAGG00000019219-9362.519ENSBTAG00000021018KHSRP6167.431Bos_taurus
ENSGAGG00000019219-6897.572ENSBTAG00000008926FUBP110090.799Bos_taurus
ENSGAGG00000019219-9361.742ENSCJAG00000016627KHSRP6167.202Callithrix_jacchus
ENSGAGG00000019219-8362.039ENSCAFG00000018667KHSRP5968.595Canis_familiaris
ENSGAGG00000019219-10096.096ENSCAFG00020015251-10096.096Canis_lupus_dingo
ENSGAGG00000019219-9360.280ENSCAFG00020019133KHSRP8854.184Canis_lupus_dingo
ENSGAGG00000019219-10096.064ENSCHIG00000013418-10096.064Capra_hircus
ENSGAGG00000019219-9362.519ENSCHIG00000027053KHSRP6067.202Capra_hircus
ENSGAGG00000019219-9261.965ENSTSYG00000011552KHSRP5967.217Carlito_syrichta
ENSGAGG00000019219-7858.491ENSCAPG00000005534KHSRP6266.667Cavia_aperea
ENSGAGG00000019219-9355.976ENSCPOG00000005140KHSRP5866.588Cavia_porcellus
ENSGAGG00000019219-9756.991ENSCCAG00000025297KHSRP6366.972Cebus_capucinus
ENSGAGG00000019219-9562.410ENSCATG00000036458KHSRP7366.402Cercocebus_atys
ENSGAGG00000019219-9258.438ENSCLAG00000007309KHSRP6066.588Chinchilla_lanigera
ENSGAGG00000019219-9361.742ENSCSAG00000009626KHSRP5867.202Chlorocebus_sabaeus
ENSGAGG00000019219-10099.853ENSCPBG00000016987-10099.853Chrysemys_picta_bellii
ENSGAGG00000019219-6368.765ENSCPBG00000005286KHSRP6268.203Chrysemys_picta_bellii
ENSGAGG00000019219-9259.777ENSCANG00000015665KHSRP6667.217Colobus_angolensis_palliatus
ENSGAGG00000019219-9986.571ENSCANG00000034534-9890.347Colobus_angolensis_palliatus
ENSGAGG00000019219-9362.053ENSCGRG00001011031Khsrp6067.661Cricetulus_griseus_chok1gshd
ENSGAGG00000019219-8860.336ENSCGRG00000015331Khsrp5867.602Cricetulus_griseus_crigri
ENSGAGG00000019219-9851.857ENSCSEG00000011429khsrp6960.909Cynoglossus_semilaevis
ENSGAGG00000019219-9356.474ENSCVAG00000001873khsrp6760.626Cyprinodon_variegatus
ENSGAGG00000019219-6656.962ENSDARG00000026489khsrp9958.519Danio_rerio
ENSGAGG00000019219-6897.345ENSDNOG00000013200-10093.835Dasypus_novemcinctus
ENSGAGG00000019219-9262.025ENSDNOG00000046507KHSRP5667.059Dasypus_novemcinctus
ENSGAGG00000019219-9255.112ENSDORG00000002447Khsrp6664.320Dipodomys_ordii
ENSGAGG00000019219-9650.753ENSETEG00000004793KHSRP6558.810Echinops_telfairi
ENSGAGG00000019219-6897.357ENSEASG00005016990-10090.512Equus_asinus_asinus
ENSGAGG00000019219-9362.364ENSEASG00005023114KHSRP6067.202Equus_asinus_asinus
ENSGAGG00000019219-9362.364ENSECAG00000018305KHSRP6067.202Equus_caballus
ENSGAGG00000019219-10096.064ENSECAG00000010867FUBP110096.064Equus_caballus
ENSGAGG00000019219-7863.536ENSELUG00000016310khsrp7764.928Esox_lucius
ENSGAGG00000019219-9854.257ENSELUG00000008445-6860.879Esox_lucius
ENSGAGG00000019219-9361.994ENSFCAG00000003731KHSRP6167.202Felis_catus
ENSGAGG00000019219-10096.064ENSFCAG00000010330-10096.064Felis_catus
ENSGAGG00000019219-6450.572ENSFDAG00000010889KHSRP7877.143Fukomys_damarensis
ENSGAGG00000019219-9459.677ENSFHEG00000009577khsrp6759.819Fundulus_heteroclitus
ENSGAGG00000019219-9556.508ENSGMOG00000002166khsrp6358.351Gadus_morhua
ENSGAGG00000019219-9753.880ENSGAFG00000010469khsrp6760.811Gambusia_affinis
ENSGAGG00000019219-9454.160ENSGACG00000012422KHSRP6462.785Gasterosteus_aculeatus
ENSGAGG00000019219-9853.394ENSGACG00000018990khsrp6260.998Gasterosteus_aculeatus
ENSGAGG00000019219-9261.331ENSGGOG00000007028KHSRP6865.509Gorilla_gorilla
ENSGAGG00000019219-9990.788ENSGGOG00000027554FUBP110090.512Gorilla_gorilla
ENSGAGG00000019219-9855.556ENSHBUG00000018543khsrp6859.020Haplochromis_burtoni
ENSGAGG00000019219-9652.924ENSHBUG00000014760KHSRP6662.000Haplochromis_burtoni
ENSGAGG00000019219-9361.860ENSHGLG00000013239KHSRP8960.182Heterocephalus_glaber_female
ENSGAGG00000019219-7748.302ENSHGLG00100000480KHSRP6654.137Heterocephalus_glaber_male
ENSGAGG00000019219-9753.421ENSHCOG00000020488khsrp6858.929Hippocampus_comes
ENSGAGG00000019219-9954.043ENSIPUG00000008034khsrp7260.285Ictalurus_punctatus
ENSGAGG00000019219-9261.965ENSSTOG00000002371KHSRP6366.981Ictidomys_tridecemlineatus
ENSGAGG00000019219-9360.809ENSJJAG00000006370Khsrp8559.513Jaculus_jaculus
ENSGAGG00000019219-9755.306ENSKMAG00000018579khsrp6759.910Kryptolebias_marmoratus
ENSGAGG00000019219-8354.737ENSLBEG00000005191khsrp6363.435Labrus_bergylta
ENSGAGG00000019219-9458.605ENSLACG00000002072KHSRP6262.069Latimeria_chalumnae
ENSGAGG00000019219-6592.379ENSLACG00000012547-6992.414Latimeria_chalumnae
ENSGAGG00000019219-9458.959ENSLOCG00000006229khsrp6466.901Lepisosteus_oculatus
ENSGAGG00000019219-9261.356ENSLAFG00000002426KHSRP7066.509Loxodonta_africana
ENSGAGG00000019219-9060.897ENSMFAG00000000292KHSRP6466.981Macaca_fascicularis
ENSGAGG00000019219-9358.544ENSMMUG00000005597KHSRP6566.055Macaca_mulatta
ENSGAGG00000019219-9559.184ENSMNEG00000036982KHSRP7567.460Macaca_nemestrina
ENSGAGG00000019219-9261.331ENSMLEG00000030501KHSRP6767.217Mandrillus_leucophaeus
ENSGAGG00000019219-9988.571ENSMLEG00000032973-10088.764Mandrillus_leucophaeus
ENSGAGG00000019219-7061.263ENSMAMG00000023639KHSRP6462.212Mastacembelus_armatus
ENSGAGG00000019219-9754.896ENSMAMG00000011746khsrp6661.451Mastacembelus_armatus
ENSGAGG00000019219-9460.294ENSMZEG00005022974-8574.194Maylandia_zebra
ENSGAGG00000019219-9652.924ENSMZEG00005011227KHSRP6662.000Maylandia_zebra
ENSGAGG00000019219-9260.160ENSMAUG00000018966Khsrp6166.745Mesocricetus_auratus
ENSGAGG00000019219-9362.112ENSMICG00000007863KHSRP8560.274Microcebus_murinus
ENSGAGG00000019219-10089.051ENSMICG00000014463-9890.649Microcebus_murinus
ENSGAGG00000019219-9258.540ENSMOCG00000018305Khsrp5966.821Microtus_ochrogaster
ENSGAGG00000019219-5454.148ENSMMOG00000021381-9256.863Mola_mola
ENSGAGG00000019219-8670.833ENSMMOG00000005097-8659.091Mola_mola
ENSGAGG00000019219-9259.968ENSMODG00000001952KHSRP6364.000Monodelphis_domestica
ENSGAGG00000019219-7156.017ENSMALG00000004958KHSRP6356.733Monopterus_albus
ENSGAGG00000019219-9749.700ENSMALG00000006104khsrp7055.862Monopterus_albus
ENSGAGG00000019219-9355.869MGP_CAROLIEiJ_G0021800Khsrp7858.093Mus_caroli
ENSGAGG00000019219-9362.053ENSMUSG00000007670Khsrp8560.883Mus_musculus
ENSGAGG00000019219-9362.053MGP_PahariEiJ_G0020789Khsrp8560.883Mus_pahari
ENSGAGG00000019219-9362.053MGP_SPRETEiJ_G0022711Khsrp8560.883Mus_spretus
ENSGAGG00000019219-9261.102ENSMPUG00000006615KHSRP6266.434Mustela_putorius_furo
ENSGAGG00000019219-6897.572ENSMPUG00000010799-6697.572Mustela_putorius_furo
ENSGAGG00000019219-9261.490ENSMLUG00000015543KHSRP6366.981Myotis_lucifugus
ENSGAGG00000019219-9361.059ENSNGAG00000023093Khsrp6163.696Nannospalax_galili
ENSGAGG00000019219-9552.115ENSNBRG00000005876KHSRP6462.329Neolamprologus_brichardi
ENSGAGG00000019219-9854.303ENSNBRG00000023797khsrp6659.864Neolamprologus_brichardi
ENSGAGG00000019219-9359.019ENSNLEG00000015923KHSRP6663.279Nomascus_leucogenys
ENSGAGG00000019219-8057.509ENSMEUG00000016601KHSRP7162.972Notamacropus_eugenii
ENSGAGG00000019219-9358.165ENSOPRG00000010594-5962.615Ochotona_princeps
ENSGAGG00000019219-9450.533ENSODEG00000015021KHSRP6455.952Octodon_degus
ENSGAGG00000019219-9857.122ENSONIG00000017713khsrp6761.745Oreochromis_niloticus
ENSGAGG00000019219-7156.566ENSONIG00000002163KHSRP6562.000Oreochromis_niloticus
ENSGAGG00000019219-9155.024ENSOANG00000000261KHSRP6962.877Ornithorhynchus_anatinus
ENSGAGG00000019219-9692.056ENSOCUG00000002225-6594.393Oryctolagus_cuniculus
ENSGAGG00000019219-6669.846ENSOCUG00000026747-9669.906Oryctolagus_cuniculus
ENSGAGG00000019219-9753.959ENSORLG00000011882khsrp6659.243Oryzias_latipes
ENSGAGG00000019219-9752.155ENSORLG00020005284khsrp6655.656Oryzias_latipes_hni
ENSGAGG00000019219-9755.852ENSORLG00015003791khsrp6760.820Oryzias_latipes_hsok
ENSGAGG00000019219-9854.559ENSOMEG00000013233khsrp6761.048Oryzias_melastigma
ENSGAGG00000019219-9362.208ENSOGAG00000008073KHSRP6167.202Otolemur_garnettii
ENSGAGG00000019219-7760.911ENSOARG00000005881KHSRP8467.213Ovis_aries
ENSGAGG00000019219-9989.343ENSPPAG00000038243-9890.498Pan_paniscus
ENSGAGG00000019219-9456.467ENSPPAG00000036398-7167.217Pan_paniscus
ENSGAGG00000019219-9160.960ENSPPAG00000036395-6466.746Pan_paniscus
ENSGAGG00000019219-9155.538ENSPPRG00000008001KHSRP5761.244Panthera_pardus
ENSGAGG00000019219-9361.240ENSPTRG00000010364KHSRP6165.991Pan_troglodytes
ENSGAGG00000019219-9989.985ENSPTRG00000000888FUBP110090.512Pan_troglodytes
ENSGAGG00000019219-9986.838ENSPANG00000004797-10090.649Papio_anubis
ENSGAGG00000019219-9361.742ENSPANG00000000103KHSRP8955.871Papio_anubis
ENSGAGG00000019219-9973.246ENSPKIG00000009065-9171.941Paramormyrops_kingsleyae
ENSGAGG00000019219-9654.678ENSPKIG00000003200khsrp8252.510Paramormyrops_kingsleyae
ENSGAGG00000019219-9854.611ENSPKIG00000005077KHSRP6861.062Paramormyrops_kingsleyae
ENSGAGG00000019219-6268.660ENSPSIG00000008244KHSRP6568.085Pelodiscus_sinensis
ENSGAGG00000019219-7771.154ENSPMGG00000016443khsrp9062.903Periophthalmus_magnuspinnatus
ENSGAGG00000019219-9258.962ENSPEMG00000022853Khsrp6267.217Peromyscus_maniculatus_bairdii
ENSGAGG00000019219-9362.519ENSPCIG00000025516KHSRP6464.783Phascolarctos_cinereus
ENSGAGG00000019219-6897.118ENSPCIG00000022984-10094.109Phascolarctos_cinereus
ENSGAGG00000019219-9854.215ENSPFOG00000004577khsrp6760.811Poecilia_formosa
ENSGAGG00000019219-9754.161ENSPLAG00000010763khsrp6760.811Poecilia_latipinna
ENSGAGG00000019219-9754.161ENSPMEG00000014049khsrp6760.811Poecilia_mexicana
ENSGAGG00000019219-9754.161ENSPREG00000000419khsrp6760.811Poecilia_reticulata
ENSGAGG00000019219-9254.186ENSPPYG00000019172-7761.404Pongo_abelii
ENSGAGG00000019219-9158.776ENSPPYG00000009454KHSRP6666.981Pongo_abelii
ENSGAGG00000019219-7662.437ENSPCAG00000000246KHSRP7657.798Procavia_capensis
ENSGAGG00000019219-9061.699ENSPCOG00000027506KHSRP6467.217Propithecus_coquereli
ENSGAGG00000019219-9358.320ENSPVAG00000007251KHSRP6062.156Pteropus_vampyrus
ENSGAGG00000019219-9552.799ENSPNYG00000014008KHSRP6161.927Pundamilia_nyererei
ENSGAGG00000019219-9854.307ENSPNYG00000001374khsrp6859.326Pundamilia_nyererei
ENSGAGG00000019219-9455.219ENSPNAG00000012026khsrp7161.297Pygocentrus_nattereri
ENSGAGG00000019219-9362.053ENSRNOG00000047628Khsrp6067.661Rattus_norvegicus
ENSGAGG00000019219-9156.070ENSRBIG00000041605KHSRP6659.330Rhinopithecus_bieti
ENSGAGG00000019219-9361.742ENSRROG00000031782KHSRP7962.924Rhinopithecus_roxellana
ENSGAGG00000019219-9261.331ENSSBOG00000034871KHSRP6767.217Saimiri_boliviensis_boliviensis
ENSGAGG00000019219-8962.255ENSSHAG00000011383KHSRP6267.407Sarcophilus_harrisii
ENSGAGG00000019219-9850.000ENSSFOG00015018719khsrp7255.689Scleropages_formosus
ENSGAGG00000019219-9550.442ENSSMAG00000004167khsrp8057.692Scophthalmus_maximus
ENSGAGG00000019219-7959.091ENSSMAG00000012166KHSRP6659.641Scophthalmus_maximus
ENSGAGG00000019219-9555.506ENSSDUG00000002110KHSRP6663.311Seriola_dumerili
ENSGAGG00000019219-9556.083ENSSDUG00000002390khsrp6861.454Seriola_dumerili
ENSGAGG00000019219-9554.341ENSSLDG00000012993khsrp6857.616Seriola_lalandi_dorsalis
ENSGAGG00000019219-9555.506ENSSLDG00000025625KHSRP6663.311Seriola_lalandi_dorsalis
ENSGAGG00000019219-9960.469ENSSPUG00000016462KHSRP6268.396Sphenodon_punctatus
ENSGAGG00000019219-6858.425ENSSPAG00000008244KHSRP5862.212Stegastes_partitus
ENSGAGG00000019219-9754.124ENSSPAG00000008349khsrp6761.470Stegastes_partitus
ENSGAGG00000019219-9362.519ENSSSCG00000013538KHSRP8457.686Sus_scrofa
ENSGAGG00000019219-10096.241ENSSSCG00000003771-10096.570Sus_scrofa
ENSGAGG00000019219-9751.880ENSTNIG00000014067khsrp6756.416Tetraodon_nigroviridis
ENSGAGG00000019219-9260.726ENSTTRG00000010390KHSRP6065.367Tursiops_truncatus
ENSGAGG00000019219-8260.823ENSUAMG00000023100KHSRP5366.856Ursus_americanus
ENSGAGG00000019219-10086.576ENSUAMG00000004961-10096.570Ursus_americanus
ENSGAGG00000019219-9257.211ENSUMAG00000011144KHSRP5860.471Ursus_maritimus
ENSGAGG00000019219-10096.064ENSUMAG00000006022-10096.064Ursus_maritimus
ENSGAGG00000019219-5962.740ENSVPAG00000010837-10062.534Vicugna_pacos
ENSGAGG00000019219-10096.204ENSVVUG00000030003-10096.204Vulpes_vulpes
ENSGAGG00000019219-9758.346ENSVVUG00000026737KHSRP5968.595Vulpes_vulpes
ENSGAGG00000019219-6890.423ENSXETG00000013137fubp16890.244Xenopus_tropicalis
ENSGAGG00000019219-9251.046ENSXETG00000021862khsrp8160.360Xenopus_tropicalis
ENSGAGG00000019219-9854.786ENSXCOG00000014443khsrp6660.811Xiphophorus_couchianus
ENSGAGG00000019219-9853.924ENSXMAG00000012876khsrp6760.811Xiphophorus_maculatus

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