EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000019349 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 13810 bases
Position: chrPPEB01006549.1:85579-99388
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	1	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	2	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	3	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	4	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	5	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	6	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	7	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	8	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	9	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	10	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	11	12
ENSGAGP00000026547	zf-C2H2	PF00096.26	1.2e-75	12	12
ENSGAGP00000026547	zf-met	PF12874.7	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000030181	-	1713	-	ENSGAGP00000026547	570 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000019349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000019349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000019349	-	99	59.150	ENSGAGG00000011487	-	99	57.951
ENSGAGG00000019349	-	78	54.688	ENSGAGG00000018885	-	65	54.688
ENSGAGG00000019349	-	99	62.278	ENSGAGG00000002214	-	99	62.278
ENSGAGG00000019349	-	79	59.564	ENSGAGG00000001469	-	91	59.564
ENSGAGG00000019349	-	73	57.377	ENSGAGG00000001387	-	62	57.377
ENSGAGG00000019349	-	76	35.514	ENSGAGG00000020362	PRDM5	68	33.634
ENSGAGG00000019349	-	79	62.987	ENSGAGG00000015232	-	71	62.987
ENSGAGG00000019349	-	74	39.409	ENSGAGG00000003883	ZNF236	63	43.860
ENSGAGG00000019349	-	78	68.109	ENSGAGG00000014389	-	94	69.336
ENSGAGG00000019349	-	79	56.452	ENSGAGG00000011399	-	85	56.452
ENSGAGG00000019349	-	77	59.170	ENSGAGG00000002828	-	68	59.170
ENSGAGG00000019349	-	99	60.596	ENSGAGG00000001645	-	92	60.596
ENSGAGG00000019349	-	79	54.167	ENSGAGG00000013021	-	96	54.167
ENSGAGG00000019349	-	78	46.575	ENSGAGG00000020168	-	70	46.575
ENSGAGG00000019349	-	77	52.837	ENSGAGG00000018445	-	83	52.837
ENSGAGG00000019349	-	78	49.057	ENSGAGG00000017094	-	52	49.057
ENSGAGG00000019349	-	87	66.667	ENSGAGG00000020134	-	72	66.667
ENSGAGG00000019349	-	96	68.996	ENSGAGG00000012452	-	93	68.996
ENSGAGG00000019349	-	77	36.779	ENSGAGG00000003095	ZNF865	82	35.973
ENSGAGG00000019349	-	77	72.455	ENSGAGG00000006683	-	94	72.455
ENSGAGG00000019349	-	77	50.889	ENSGAGG00000011366	-	99	50.889
ENSGAGG00000019349	-	77	62.428	ENSGAGG00000010492	-	87	62.428
ENSGAGG00000019349	-	75	58.621	ENSGAGG00000017640	-	65	58.621
ENSGAGG00000019349	-	78	74.359	ENSGAGG00000017986	-	97	69.892
ENSGAGG00000019349	-	79	66.489	ENSGAGG00000016529	-	94	66.489
ENSGAGG00000019349	-	77	71.937	ENSGAGG00000009739	-	99	71.937
ENSGAGG00000019349	-	80	38.743	ENSGAGG00000022571	ZNF319	93	38.743
ENSGAGG00000019349	-	99	71.429	ENSGAGG00000014356	-	89	68.571
ENSGAGG00000019349	-	78	71.290	ENSGAGG00000013851	-	78	71.290
ENSGAGG00000019349	-	79	63.300	ENSGAGG00000015451	-	86	62.000
ENSGAGG00000019349	-	98	63.415	ENSGAGG00000010324	-	93	63.415
ENSGAGG00000019349	-	72	34.054	ENSGAGG00000022082	PRDM15	57	31.847
ENSGAGG00000019349	-	99	70.293	ENSGAGG00000006960	-	98	70.293
ENSGAGG00000019349	-	99	57.910	ENSGAGG00000009272	-	98	58.605
ENSGAGG00000019349	-	77	67.857	ENSGAGG00000000971	-	92	67.857
ENSGAGG00000019349	-	73	45.522	ENSGAGG00000021327	GFI1B	53	45.522
ENSGAGG00000019349	-	77	70.370	ENSGAGG00000004740	-	87	69.189
ENSGAGG00000019349	-	72	54.839	ENSGAGG00000004926	-	96	54.839
ENSGAGG00000019349	-	77	72.183	ENSGAGG00000007230	-	82	72.183
ENSGAGG00000019349	-	79	68.657	ENSGAGG00000011574	-	80	68.657
ENSGAGG00000019349	-	99	72.157	ENSGAGG00000010833	-	98	66.447
ENSGAGG00000019349	-	78	55.497	ENSGAGG00000006848	-	59	56.684
ENSGAGG00000019349	-	77	54.780	ENSGAGG00000006846	-	94	54.780
ENSGAGG00000019349	-	99	72.109	ENSGAGG00000008773	-	98	63.608
ENSGAGG00000019349	-	99	59.752	ENSGAGG00000002179	-	98	60.900
ENSGAGG00000019349	-	72	58.130	ENSGAGG00000005805	-	83	58.130
ENSGAGG00000019349	-	74	48.858	ENSGAGG00000005331	-	81	48.858
ENSGAGG00000019349	-	78	61.780	ENSGAGG00000006323	-	93	62.531
ENSGAGG00000019349	-	98	67.442	ENSGAGG00000020594	-	99	66.819

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000019349	-	98	48.441	ENSAPLG00000012660	-	97	48.441	Anas_platyrhynchos
ENSGAGG00000019349	-	75	59.589	ENSAMXG00000035690	-	81	59.589	Astyanax_mexicanus
ENSGAGG00000019349	-	76	56.438	ENSAMXG00000026142	-	93	56.438	Astyanax_mexicanus
ENSGAGG00000019349	-	76	54.545	ENSAMXG00000026144	-	94	54.545	Astyanax_mexicanus
ENSGAGG00000019349	-	73	58.716	ENSAMXG00000033124	-	57	58.716	Astyanax_mexicanus
ENSGAGG00000019349	-	78	53.959	ENSAMXG00000039752	-	98	53.959	Astyanax_mexicanus
ENSGAGG00000019349	-	75	57.650	ENSAMXG00000040212	-	87	57.650	Astyanax_mexicanus
ENSGAGG00000019349	-	78	56.401	ENSAMXG00000001626	-	94	56.401	Astyanax_mexicanus
ENSGAGG00000019349	-	73	61.864	ENSAMXG00000037703	-	85	61.864	Astyanax_mexicanus
ENSGAGG00000019349	-	79	54.248	ENSAMXG00000037143	-	95	54.248	Astyanax_mexicanus
ENSGAGG00000019349	-	76	53.535	ENSAMXG00000019489	-	96	52.356	Astyanax_mexicanus
ENSGAGG00000019349	-	78	58.407	ENSAMXG00000004610	-	97	57.965	Astyanax_mexicanus
ENSGAGG00000019349	-	75	56.727	ENSAMXG00000003002	-	96	56.727	Astyanax_mexicanus
ENSGAGG00000019349	-	73	55.249	ENSAMXG00000032619	-	99	55.249	Astyanax_mexicanus
ENSGAGG00000019349	-	79	54.982	ENSAMXG00000037326	-	96	54.982	Astyanax_mexicanus
ENSGAGG00000019349	-	75	59.412	ENSAMXG00000029878	-	92	59.412	Astyanax_mexicanus
ENSGAGG00000019349	-	73	59.732	ENSAMXG00000011804	-	86	59.732	Astyanax_mexicanus
ENSGAGG00000019349	-	78	56.535	ENSAMXG00000038453	-	88	56.535	Astyanax_mexicanus
ENSGAGG00000019349	-	79	57.841	ENSAMXG00000031489	-	95	57.841	Astyanax_mexicanus
ENSGAGG00000019349	-	73	53.333	ENSAMXG00000043978	-	87	53.333	Astyanax_mexicanus
ENSGAGG00000019349	-	78	61.058	ENSAMXG00000025455	-	96	61.058	Astyanax_mexicanus
ENSGAGG00000019349	-	72	50.720	ENSAMXG00000039881	-	54	50.720	Astyanax_mexicanus
ENSGAGG00000019349	-	73	60.797	ENSAMXG00000041725	-	92	60.797	Astyanax_mexicanus
ENSGAGG00000019349	-	77	59.346	ENSCPBG00000002014	-	59	59.346	Chrysemys_picta_bellii
ENSGAGG00000019349	-	79	63.221	ENSEASG00005020341	-	94	63.221	Equus_asinus_asinus
ENSGAGG00000019349	-	78	56.145	ENSECAG00000039445	-	94	56.145	Equus_caballus
ENSGAGG00000019349	-	78	63.221	ENSECAG00000017293	-	95	63.221	Equus_caballus
ENSGAGG00000019349	-	79	57.600	ENSIPUG00000015177	-	55	57.600	Ictalurus_punctatus
ENSGAGG00000019349	-	79	56.233	ENSIPUG00000015400	-	97	55.425	Ictalurus_punctatus
ENSGAGG00000019349	-	98	60.432	ENSMPUG00000008437	-	97	60.432	Mustela_putorius_furo
ENSGAGG00000019349	-	98	58.719	ENSPTIG00000009259	-	98	62.802	Panthera_tigris_altaica
ENSGAGG00000019349	-	76	58.577	ENSPSIG00000016247	-	65	58.577	Pelodiscus_sinensis
ENSGAGG00000019349	-	78	54.902	ENSPNAG00000024704	-	95	54.902	Pygocentrus_nattereri
ENSGAGG00000019349	-	74	60.606	ENSPNAG00000007072	-	92	60.606	Pygocentrus_nattereri
ENSGAGG00000019349	-	73	56.806	ENSPNAG00000017479	-	95	56.806	Pygocentrus_nattereri
ENSGAGG00000019349	-	77	60.000	ENSPNAG00000016045	-	78	60.000	Pygocentrus_nattereri
ENSGAGG00000019349	-	78	61.566	ENSPNAG00000008653	-	96	61.566	Pygocentrus_nattereri
ENSGAGG00000019349	-	77	62.162	ENSPNAG00000018437	-	76	62.162	Pygocentrus_nattereri
ENSGAGG00000019349	-	76	61.404	ENSPNAG00000016025	-	90	61.404	Pygocentrus_nattereri
ENSGAGG00000019349	-	79	57.917	ENSPNAG00000017455	-	84	56.710	Pygocentrus_nattereri
ENSGAGG00000019349	-	77	58.233	ENSPNAG00000002287	-	89	58.233	Pygocentrus_nattereri
ENSGAGG00000019349	-	77	57.307	ENSPNAG00000028765	-	86	57.377	Pygocentrus_nattereri
ENSGAGG00000019349	-	77	56.078	ENSPNAG00000021942	-	97	56.078	Pygocentrus_nattereri
ENSGAGG00000019349	-	79	53.205	ENSPNAG00000000783	-	94	54.007	Pygocentrus_nattereri
ENSGAGG00000019349	-	79	58.015	ENSPNAG00000005914	-	77	58.015	Pygocentrus_nattereri
ENSGAGG00000019349	-	78	63.226	ENSPNAG00000018471	-	88	63.226	Pygocentrus_nattereri
ENSGAGG00000019349	-	75	60.251	ENSPNAG00000012138	-	93	60.251	Pygocentrus_nattereri
ENSGAGG00000019349	-	73	58.203	ENSPNAG00000003919	-	96	58.203	Pygocentrus_nattereri
ENSGAGG00000019349	-	73	56.803	ENSPNAG00000012366	-	92	56.803	Pygocentrus_nattereri
ENSGAGG00000019349	-	78	60.881	ENSPNAG00000003526	-	84	60.881	Pygocentrus_nattereri
ENSGAGG00000019349	-	73	52.121	ENSPNAG00000029386	-	88	51.212	Pygocentrus_nattereri
ENSGAGG00000019349	-	92	60.628	ENSUAMG00000027384	-	93	60.000	Ursus_americanus
ENSGAGG00000019349	-	81	59.804	ENSUAMG00000027415	-	89	59.804	Ursus_americanus
ENSGAGG00000019349	-	78	62.011	ENSVPAG00000002698	-	99	62.011	Vicugna_pacos