EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000019483 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 42547 bases
Position: chrPPEB01001774.1:138160-180706
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000027073	MIF4G_like	PF09088.11	5.3e-36	1	1
ENSGAGP00000027069	MIF4G_like	PF09088.11	7.4e-36	1	1
ENSGAGP00000027073	MIF4G_like_2	PF09090.11	1.1e-86	1	1
ENSGAGP00000027069	MIF4G_like_2	PF09090.11	2.1e-86	1	1
ENSGAGP00000027069	MIF4G	PF02854.19	1.1e-28	1	1
ENSGAGP00000027073	MIF4G	PF02854.19	1.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000030763	NCBP1-202	2187	-	ENSGAGP00000027073	728 (aa)	-	-
ENSGAGT00000030759	NCBP1-201	2388	-	ENSGAGP00000027069	795 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000019483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000019483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000019483	NCBP1	99	90.417	ENSG00000136937	NCBP1	100	88.805	Homo_sapiens
ENSGAGG00000019483	NCBP1	99	84.654	ENSAPOG00000008002	NCBP1	99	84.005	Acanthochromis_polyacanthus
ENSGAGG00000019483	NCBP1	99	90.417	ENSAMEG00000004763	NCBP1	98	89.668	Ailuropoda_melanoleuca
ENSGAGG00000019483	NCBP1	99	84.383	ENSACIG00000000274	NCBP1	99	84.025	Amphilophus_citrinellus
ENSGAGG00000019483	NCBP1	99	84.780	ENSAOCG00000021148	NCBP1	99	84.131	Amphiprion_ocellaris
ENSGAGG00000019483	NCBP1	99	84.780	ENSAPEG00000001701	NCBP1	99	84.131	Amphiprion_percula
ENSGAGG00000019483	NCBP1	99	84.277	ENSATEG00000006929	NCBP1	99	83.627	Anabas_testudineus
ENSGAGG00000019483	NCBP1	99	94.126	ENSAPLG00000016318	NCBP1	100	94.350	Anas_platyrhynchos
ENSGAGG00000019483	NCBP1	100	91.760	ENSACAG00000004409	NCBP1	87	91.885	Anolis_carolinensis
ENSGAGG00000019483	NCBP1	100	90.110	ENSANAG00000025744	NCBP1	100	89.973	Aotus_nancymaae
ENSGAGG00000019483	NCBP1	99	84.151	ENSACLG00000014812	NCBP1	99	83.501	Astatotilapia_calliptera
ENSGAGG00000019483	NCBP1	99	83.668	ENSAMXG00000016364	NCBP1	99	83.668	Astyanax_mexicanus
ENSGAGG00000019483	NCBP1	99	90.000	ENSBTAG00000009732	NCBP1	99	90.332	Bos_taurus
ENSGAGG00000019483	NCBP1	99	34.367	WBGene00018156	ncbp-1	98	34.045	Caenorhabditis_elegans
ENSGAGG00000019483	NCBP1	100	90.247	ENSCJAG00000010840	NCBP1	100	90.110	Callithrix_jacchus
ENSGAGG00000019483	NCBP1	99	90.417	ENSCAFG00000002445	NCBP1	100	88.805	Canis_familiaris
ENSGAGG00000019483	NCBP1	100	90.247	ENSCAFG00020017997	NCBP1	100	90.110	Canis_lupus_dingo
ENSGAGG00000019483	NCBP1	99	89.722	ENSCHIG00000020139	NCBP1	100	88.176	Capra_hircus
ENSGAGG00000019483	NCBP1	51	91.912	ENSTSYG00000011914	NCBP1	98	93.417	Carlito_syrichta
ENSGAGG00000019483	NCBP1	89	80.960	ENSCAPG00000014252	NCBP1	91	80.960	Cavia_aperea
ENSGAGG00000019483	NCBP1	99	90.139	ENSCPOG00000012573	NCBP1	99	89.578	Cavia_porcellus
ENSGAGG00000019483	NCBP1	99	90.417	ENSCCAG00000032297	NCBP1	100	89.057	Cebus_capucinus
ENSGAGG00000019483	NCBP1	99	90.417	ENSCATG00000010052	NCBP1	99	90.240	Cercocebus_atys
ENSGAGG00000019483	NCBP1	99	90.417	ENSCLAG00000014339	NCBP1	100	88.931	Chinchilla_lanigera
ENSGAGG00000019483	NCBP1	99	90.417	ENSCSAG00000010929	NCBP1	100	88.805	Chlorocebus_sabaeus
ENSGAGG00000019483	NCBP1	89	89.720	ENSCHOG00000010332	NCBP1	90	89.720	Choloepus_hoffmanni
ENSGAGG00000019483	NCBP1	100	99.451	ENSCPBG00000024344	NCBP1	100	99.451	Chrysemys_picta_bellii
ENSGAGG00000019483	NCBP1	98	55.203	ENSCING00000008990	-	98	54.822	Ciona_intestinalis
ENSGAGG00000019483	NCBP1	98	54.156	ENSCSAVG00000005300	-	99	54.124	Ciona_savignyi
ENSGAGG00000019483	NCBP1	100	90.247	ENSCANG00000036913	NCBP1	100	90.110	Colobus_angolensis_palliatus
ENSGAGG00000019483	NCBP1	99	89.861	ENSCGRG00001015771	Ncbp1	100	88.302	Cricetulus_griseus_chok1gshd
ENSGAGG00000019483	NCBP1	99	89.861	ENSCGRG00000010311	Ncbp1	99	89.158	Cricetulus_griseus_crigri
ENSGAGG00000019483	NCBP1	99	84.277	ENSCSEG00000012377	NCBP1	99	83.753	Cynoglossus_semilaevis
ENSGAGG00000019483	NCBP1	99	82.390	ENSCVAG00000008795	NCBP1	99	83.145	Cyprinodon_variegatus
ENSGAGG00000019483	NCBP1	99	89.444	ENSDNOG00000006885	NCBP1	100	88.953	Dasypus_novemcinctus
ENSGAGG00000019483	NCBP1	99	89.736	ENSDORG00000013652	Ncbp1	100	84.355	Dipodomys_ordii
ENSGAGG00000019483	NCBP1	82	32.836	FBgn0038887	CG7907	86	32.735	Drosophila_melanogaster
ENSGAGG00000019483	NCBP1	98	58.440	FBgn0022942	Cbp80	98	58.440	Drosophila_melanogaster
ENSGAGG00000019483	NCBP1	89	84.449	ENSETEG00000009705	NCBP1	89	84.017	Echinops_telfairi
ENSGAGG00000019483	NCBP1	99	74.362	ENSEBUG00000008386	NCBP1	98	74.235	Eptatretus_burgeri
ENSGAGG00000019483	NCBP1	99	89.861	ENSEASG00005022795	NCBP1	100	88.302	Equus_asinus_asinus
ENSGAGG00000019483	NCBP1	99	90.000	ENSECAG00000013847	NCBP1	100	88.428	Equus_caballus
ENSGAGG00000019483	NCBP1	95	83.377	ENSEEUG00000015973	NCBP1	99	83.245	Erinaceus_europaeus
ENSGAGG00000019483	NCBP1	99	82.767	ENSELUG00000022519	NCBP1	99	83.522	Esox_lucius
ENSGAGG00000019483	NCBP1	99	90.278	ENSFCAG00000001206	NCBP1	100	88.679	Felis_catus
ENSGAGG00000019483	NCBP1	99	94.787	ENSFALG00000001193	NCBP1	100	95.674	Ficedula_albicollis
ENSGAGG00000019483	NCBP1	99	90.278	ENSFDAG00000010864	NCBP1	100	88.805	Fukomys_damarensis
ENSGAGG00000019483	NCBP1	99	83.522	ENSFHEG00000000655	NCBP1	99	83.522	Fundulus_heteroclitus
ENSGAGG00000019483	NCBP1	99	81.887	ENSGMOG00000008653	NCBP1	99	81.887	Gadus_morhua
ENSGAGG00000019483	NCBP1	99	94.766	ENSGALG00000002087	NCBP1	98	95.275	Gallus_gallus
ENSGAGG00000019483	NCBP1	99	83.648	ENSGAFG00000017787	NCBP1	99	83.648	Gambusia_affinis
ENSGAGG00000019483	NCBP1	98	83.057	ENSGACG00000016772	NCBP1	97	82.675	Gasterosteus_aculeatus
ENSGAGG00000019483	NCBP1	100	90.110	ENSGGOG00000001376	NCBP1	100	89.973	Gorilla_gorilla
ENSGAGG00000019483	NCBP1	99	84.151	ENSHBUG00000020843	NCBP1	99	83.501	Haplochromis_burtoni
ENSGAGG00000019483	NCBP1	99	90.278	ENSHGLG00000001882	NCBP1	100	88.805	Heterocephalus_glaber_female
ENSGAGG00000019483	NCBP1	99	78.255	ENSHGLG00000018112	-	99	77.610	Heterocephalus_glaber_female
ENSGAGG00000019483	NCBP1	99	90.278	ENSHGLG00100013014	NCBP1	100	88.805	Heterocephalus_glaber_male
ENSGAGG00000019483	NCBP1	99	77.978	ENSHGLG00100017373	-	99	77.358	Heterocephalus_glaber_male
ENSGAGG00000019483	NCBP1	84	74.513	ENSHCOG00000000204	NCBP1	91	74.513	Hippocampus_comes
ENSGAGG00000019483	NCBP1	99	83.145	ENSIPUG00000007275	ncbp1	99	83.145	Ictalurus_punctatus
ENSGAGG00000019483	NCBP1	99	90.694	ENSSTOG00000002695	NCBP1	100	89.057	Ictidomys_tridecemlineatus
ENSGAGG00000019483	NCBP1	99	83.774	ENSKMAG00000003594	NCBP1	98	86.531	Kryptolebias_marmoratus
ENSGAGG00000019483	NCBP1	99	82.382	ENSLBEG00000011661	NCBP1	99	81.739	Labrus_bergylta
ENSGAGG00000019483	NCBP1	98	82.911	ENSLACG00000013955	NCBP1	98	82.219	Latimeria_chalumnae
ENSGAGG00000019483	NCBP1	99	73.225	ENSLOCG00000009579	NCBP1	99	72.976	Lepisosteus_oculatus
ENSGAGG00000019483	NCBP1	99	90.000	ENSLAFG00000005999	NCBP1	100	88.428	Loxodonta_africana
ENSGAGG00000019483	NCBP1	99	90.417	ENSMFAG00000030994	NCBP1	99	90.240	Macaca_fascicularis
ENSGAGG00000019483	NCBP1	99	90.417	ENSMMUG00000012281	NCBP1	99	90.240	Macaca_mulatta
ENSGAGG00000019483	NCBP1	99	90.417	ENSMNEG00000042790	NCBP1	100	88.805	Macaca_nemestrina
ENSGAGG00000019483	NCBP1	100	90.110	ENSMLEG00000030374	NCBP1	100	89.973	Mandrillus_leucophaeus
ENSGAGG00000019483	NCBP1	99	84.151	ENSMAMG00000014806	NCBP1	99	84.291	Mastacembelus_armatus
ENSGAGG00000019483	NCBP1	99	82.207	ENSMZEG00005009290	-	99	83.463	Maylandia_zebra
ENSGAGG00000019483	NCBP1	99	84.151	ENSMZEG00005003469	NCBP1	99	83.501	Maylandia_zebra
ENSGAGG00000019483	NCBP1	99	89.861	ENSMAUG00000020583	Ncbp1	99	89.045	Mesocricetus_auratus
ENSGAGG00000019483	NCBP1	99	89.861	ENSMICG00000012682	NCBP1	100	88.302	Microcebus_murinus
ENSGAGG00000019483	NCBP1	99	89.583	ENSMOCG00000015818	Ncbp1	100	88.050	Microtus_ochrogaster
ENSGAGG00000019483	NCBP1	99	82.197	ENSMMOG00000002610	NCBP1	99	82.222	Mola_mola
ENSGAGG00000019483	NCBP1	99	89.256	ENSMODG00000003202	NCBP1	97	89.386	Monodelphis_domestica
ENSGAGG00000019483	NCBP1	99	83.648	ENSMALG00000003547	NCBP1	99	82.997	Monopterus_albus
ENSGAGG00000019483	NCBP1	99	89.722	MGP_CAROLIEiJ_G0025982	Ncbp1	100	88.176	Mus_caroli
ENSGAGG00000019483	NCBP1	99	89.722	ENSMUSG00000028330	Ncbp1	100	88.176	Mus_musculus
ENSGAGG00000019483	NCBP1	99	90.000	MGP_PahariEiJ_G0028318	Ncbp1	100	88.428	Mus_pahari
ENSGAGG00000019483	NCBP1	99	89.722	MGP_SPRETEiJ_G0026945	Ncbp1	100	88.176	Mus_spretus
ENSGAGG00000019483	NCBP1	99	90.278	ENSMPUG00000006399	NCBP1	100	88.679	Mustela_putorius_furo
ENSGAGG00000019483	NCBP1	99	90.000	ENSMLUG00000015201	NCBP1	100	88.903	Myotis_lucifugus
ENSGAGG00000019483	NCBP1	99	89.861	ENSNGAG00000014101	Ncbp1	100	88.176	Nannospalax_galili
ENSGAGG00000019483	NCBP1	78	87.225	ENSNBRG00000014674	NCBP1	98	87.225	Neolamprologus_brichardi
ENSGAGG00000019483	NCBP1	100	90.110	ENSNLEG00000016909	NCBP1	100	89.973	Nomascus_leucogenys
ENSGAGG00000019483	NCBP1	89	88.106	ENSMEUG00000010672	NCBP1	90	86.344	Notamacropus_eugenii
ENSGAGG00000019483	NCBP1	79	91.176	ENSOPRG00000002144	-	83	91.176	Ochotona_princeps
ENSGAGG00000019483	NCBP1	99	90.278	ENSODEG00000003232	NCBP1	100	88.805	Octodon_degus
ENSGAGG00000019483	NCBP1	99	84.151	ENSONIG00000001502	NCBP1	99	83.501	Oreochromis_niloticus
ENSGAGG00000019483	NCBP1	78	92.295	ENSOANG00000001918	NCBP1	100	92.295	Ornithorhynchus_anatinus
ENSGAGG00000019483	NCBP1	97	90.185	ENSOCUG00000013853	NCBP1	95	89.193	Oryctolagus_cuniculus
ENSGAGG00000019483	NCBP1	99	82.854	ENSORLG00000011008	NCBP1	99	82.456	Oryzias_latipes
ENSGAGG00000019483	NCBP1	99	82.854	ENSORLG00020017455	NCBP1	99	82.456	Oryzias_latipes_hni
ENSGAGG00000019483	NCBP1	99	82.854	ENSORLG00015012127	NCBP1	99	82.456	Oryzias_latipes_hsok
ENSGAGG00000019483	NCBP1	99	83.229	ENSOMEG00000020698	NCBP1	99	82.957	Oryzias_melastigma
ENSGAGG00000019483	NCBP1	99	90.556	ENSOGAG00000013888	NCBP1	98	89.682	Otolemur_garnettii
ENSGAGG00000019483	NCBP1	99	89.722	ENSOARG00000011233	NCBP1	100	88.176	Ovis_aries
ENSGAGG00000019483	NCBP1	100	90.110	ENSPPAG00000026462	NCBP1	100	89.973	Pan_paniscus
ENSGAGG00000019483	NCBP1	99	90.417	ENSPPRG00000022574	NCBP1	100	88.805	Panthera_pardus
ENSGAGG00000019483	NCBP1	99	90.417	ENSPTIG00000018507	NCBP1	100	88.805	Panthera_tigris_altaica
ENSGAGG00000019483	NCBP1	99	90.417	ENSPTRG00000021167	NCBP1	100	88.805	Pan_troglodytes
ENSGAGG00000019483	NCBP1	100	90.110	ENSPANG00000025591	NCBP1	100	89.973	Papio_anubis
ENSGAGG00000019483	NCBP1	100	82.390	ENSPKIG00000015861	NCBP1	100	82.390	Paramormyrops_kingsleyae
ENSGAGG00000019483	NCBP1	70	97.852	ENSPSIG00000009558	NCBP1	100	97.852	Pelodiscus_sinensis
ENSGAGG00000019483	NCBP1	99	79.548	ENSPMGG00000020476	NCBP1	99	79.449	Periophthalmus_magnuspinnatus
ENSGAGG00000019483	NCBP1	99	89.722	ENSPEMG00000020105	Ncbp1	100	87.925	Peromyscus_maniculatus_bairdii
ENSGAGG00000019483	NCBP1	99	68.647	ENSPMAG00000005533	NCBP1	98	68.142	Petromyzon_marinus
ENSGAGG00000019483	NCBP1	99	88.981	ENSPCIG00000015800	NCBP1	97	89.130	Phascolarctos_cinereus
ENSGAGG00000019483	NCBP1	99	83.333	ENSPFOG00000004158	NCBP1	99	83.083	Poecilia_formosa
ENSGAGG00000019483	NCBP1	99	83.648	ENSPLAG00000020002	NCBP1	99	83.648	Poecilia_latipinna
ENSGAGG00000019483	NCBP1	99	83.648	ENSPMEG00000019821	NCBP1	99	83.648	Poecilia_mexicana
ENSGAGG00000019483	NCBP1	99	83.668	ENSPREG00000006035	NCBP1	99	83.166	Poecilia_reticulata
ENSGAGG00000019483	NCBP1	99	90.417	ENSPPYG00000019426	NCBP1	100	88.805	Pongo_abelii
ENSGAGG00000019483	NCBP1	88	95.703	ENSPCAG00000009943	NCBP1	85	95.172	Procavia_capensis
ENSGAGG00000019483	NCBP1	89	93.421	ENSPCOG00000020024	NCBP1	98	93.421	Propithecus_coquereli
ENSGAGG00000019483	NCBP1	99	89.861	ENSPVAG00000005924	NCBP1	100	88.302	Pteropus_vampyrus
ENSGAGG00000019483	NCBP1	99	82.940	ENSPNYG00000002140	NCBP1	99	83.102	Pundamilia_nyererei
ENSGAGG00000019483	NCBP1	99	83.668	ENSPNAG00000027753	NCBP1	99	83.668	Pygocentrus_nattereri
ENSGAGG00000019483	NCBP1	99	89.861	ENSRNOG00000023605	Ncbp1	100	88.302	Rattus_norvegicus
ENSGAGG00000019483	NCBP1	99	90.417	ENSRBIG00000043175	NCBP1	99	90.240	Rhinopithecus_bieti
ENSGAGG00000019483	NCBP1	100	90.110	ENSRROG00000029767	NCBP1	100	89.973	Rhinopithecus_roxellana
ENSGAGG00000019483	NCBP1	99	90.417	ENSSBOG00000019378	NCBP1	100	88.805	Saimiri_boliviensis_boliviensis
ENSGAGG00000019483	NCBP1	70	88.593	ENSSHAG00000015882	NCBP1	73	88.506	Sarcophilus_harrisii
ENSGAGG00000019483	NCBP1	99	82.781	ENSSFOG00015001872	NCBP1	99	82.586	Scleropages_formosus
ENSGAGG00000019483	NCBP1	99	83.145	ENSSMAG00000007463	NCBP1	99	82.620	Scophthalmus_maximus
ENSGAGG00000019483	NCBP1	99	83.501	ENSSDUG00000007019	NCBP1	100	83.265	Seriola_dumerili
ENSGAGG00000019483	NCBP1	99	84.025	ENSSLDG00000021924	NCBP1	99	83.375	Seriola_lalandi_dorsalis
ENSGAGG00000019483	NCBP1	77	91.000	ENSSARG00000007274	NCBP1	87	79.482	Sorex_araneus
ENSGAGG00000019483	NCBP1	98	86.462	ENSSPUG00000008609	NCBP1	100	85.409	Sphenodon_punctatus
ENSGAGG00000019483	NCBP1	99	84.654	ENSSPAG00000012550	NCBP1	99	84.005	Stegastes_partitus
ENSGAGG00000019483	NCBP1	99	90.139	ENSSSCG00000005366	NCBP1	100	88.553	Sus_scrofa
ENSGAGG00000019483	NCBP1	100	89.308	ENSTGUG00000001472	NCBP1	100	89.308	Taeniopygia_guttata
ENSGAGG00000019483	NCBP1	99	83.396	ENSTRUG00000005287	NCBP1	99	82.746	Takifugu_rubripes
ENSGAGG00000019483	NCBP1	99	87.083	ENSTBEG00000004035	NCBP1	100	85.786	Tupaia_belangeri
ENSGAGG00000019483	NCBP1	86	93.750	ENSTTRG00000000507	NCBP1	88	87.903	Tursiops_truncatus
ENSGAGG00000019483	NCBP1	99	90.278	ENSUAMG00000005471	NCBP1	100	88.679	Ursus_americanus
ENSGAGG00000019483	NCBP1	100	87.534	ENSUMAG00000011865	NCBP1	100	89.971	Ursus_maritimus
ENSGAGG00000019483	NCBP1	99	90.278	ENSVPAG00000010537	NCBP1	100	84.780	Vicugna_pacos
ENSGAGG00000019483	NCBP1	99	90.417	ENSVVUG00000019725	NCBP1	100	88.805	Vulpes_vulpes
ENSGAGG00000019483	NCBP1	100	82.642	ENSXETG00000010179	ncbp1	100	82.264	Xenopus_tropicalis
ENSGAGG00000019483	NCBP1	99	83.522	ENSXMAG00000018253	NCBP1	99	83.522	Xiphophorus_maculatus