EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000019698 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 33949 bases
Position: chrPPEB01001244.1:304970-338918
Accession: 28270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000027072	R3H	PF01424.22	3.4e-07	1	1
ENSGAGP00000027075	R3H	PF01424.22	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000030765	R3HDM4-202	2606	-	ENSGAGP00000027075	262 (aa)	-	-
ENSGAGT00000030762	R3HDM4-201	3364	-	ENSGAGP00000027072	262 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000019698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000019698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000019698	R3HDM4	98	67.568	ENSG00000198858	R3HDM4	97	67.568	Homo_sapiens
ENSGAGG00000019698	R3HDM4	91	70.833	ENSAMEG00000003001	R3HDM4	98	70.833	Ailuropoda_melanoleuca
ENSGAGG00000019698	R3HDM4	100	61.278	ENSACIG00000004672	r3hdm4	100	61.278	Amphilophus_citrinellus
ENSGAGG00000019698	R3HDM4	98	60.305	ENSATEG00000015913	r3hdm4	99	60.687	Anabas_testudineus
ENSGAGG00000019698	R3HDM4	91	70.833	ENSANAG00000029748	R3HDM4	99	70.833	Aotus_nancymaae
ENSGAGG00000019698	R3HDM4	100	67.045	ENSBTAG00000046406	R3HDM4	89	71.667	Bos_taurus
ENSGAGG00000019698	R3HDM4	98	67.308	ENSCJAG00000020114	R3HDM4	95	67.308	Callithrix_jacchus
ENSGAGG00000019698	R3HDM4	98	67.308	ENSCAFG00000019665	R3HDM4	94	67.308	Canis_familiaris
ENSGAGG00000019698	R3HDM4	98	66.923	ENSCAFG00020016880	R3HDM4	94	66.923	Canis_lupus_dingo
ENSGAGG00000019698	R3HDM4	98	67.816	ENSCHIG00000020110	R3HDM4	93	70.370	Capra_hircus
ENSGAGG00000019698	R3HDM4	92	68.724	ENSCCAG00000019955	R3HDM4	88	68.724	Cebus_capucinus
ENSGAGG00000019698	R3HDM4	98	67.433	ENSCATG00000037269	R3HDM4	97	67.433	Cercocebus_atys
ENSGAGG00000019698	R3HDM4	92	69.136	ENSCLAG00000007094	R3HDM4	99	69.136	Chinchilla_lanigera
ENSGAGG00000019698	R3HDM4	98	68.340	ENSCSAG00000012574	R3HDM4	97	68.340	Chlorocebus_sabaeus
ENSGAGG00000019698	R3HDM4	100	97.328	ENSCPBG00000009805	R3HDM4	100	97.328	Chrysemys_picta_bellii
ENSGAGG00000019698	R3HDM4	94	69.636	ENSCANG00000040439	R3HDM4	87	69.636	Colobus_angolensis_palliatus
ENSGAGG00000019698	R3HDM4	97	67.442	ENSCGRG00001021650	R3hdm4	96	67.442	Cricetulus_griseus_chok1gshd
ENSGAGG00000019698	R3HDM4	97	67.442	ENSCGRG00000013169	R3hdm4	96	67.442	Cricetulus_griseus_crigri
ENSGAGG00000019698	R3HDM4	100	56.604	ENSCSEG00000018211	r3hdm4	100	56.604	Cynoglossus_semilaevis
ENSGAGG00000019698	R3HDM4	100	60.526	ENSCVAG00000017127	r3hdm4	100	60.526	Cyprinodon_variegatus
ENSGAGG00000019698	R3HDM4	95	68.504	ENSDORG00000006605	R3hdm4	99	69.136	Dipodomys_ordii
ENSGAGG00000019698	R3HDM4	92	69.959	ENSEASG00005021556	R3HDM4	91	68.800	Equus_asinus_asinus
ENSGAGG00000019698	R3HDM4	93	69.796	ENSECAG00000000003	R3HDM4	94	68.359	Equus_caballus
ENSGAGG00000019698	R3HDM4	98	68.846	ENSFCAG00000042437	R3HDM4	94	68.846	Felis_catus
ENSGAGG00000019698	R3HDM4	92	87.967	ENSFALG00000013938	R3HDM4	100	87.967	Ficedula_albicollis
ENSGAGG00000019698	R3HDM4	92	68.443	ENSFDAG00000017040	R3HDM4	99	68.443	Fukomys_damarensis
ENSGAGG00000019698	R3HDM4	100	59.623	ENSFHEG00000017636	r3hdm4	100	59.774	Fundulus_heteroclitus
ENSGAGG00000019698	R3HDM4	88	59.483	ENSGMOG00000001231	r3hdm4	95	59.483	Gadus_morhua
ENSGAGG00000019698	R3HDM4	100	84.091	ENSGALG00000001998	R3HDM4	100	84.091	Gallus_gallus
ENSGAGG00000019698	R3HDM4	100	61.132	ENSGAFG00000004173	r3hdm4	100	61.132	Gambusia_affinis
ENSGAGG00000019698	R3HDM4	94	69.076	ENSGGOG00000008040	R3HDM4	99	69.547	Gorilla_gorilla
ENSGAGG00000019698	R3HDM4	100	61.654	ENSHBUG00000014810	r3hdm4	100	62.030	Haplochromis_burtoni
ENSGAGG00000019698	R3HDM4	93	67.347	ENSHGLG00000016194	R3HDM4	96	66.148	Heterocephalus_glaber_female
ENSGAGG00000019698	R3HDM4	99	58.712	ENSHCOG00000008422	r3hdm4	99	58.712	Hippocampus_comes
ENSGAGG00000019698	R3HDM4	100	57.795	ENSIPUG00000006716	r3hdm4	100	57.795	Ictalurus_punctatus
ENSGAGG00000019698	R3HDM4	91	67.917	ENSSTOG00000023015	R3HDM4	99	67.078	Ictidomys_tridecemlineatus
ENSGAGG00000019698	R3HDM4	92	67.347	ENSJJAG00000012475	R3hdm4	96	65.116	Jaculus_jaculus
ENSGAGG00000019698	R3HDM4	100	60.526	ENSKMAG00000005853	r3hdm4	100	60.526	Kryptolebias_marmoratus
ENSGAGG00000019698	R3HDM4	100	60.150	ENSLBEG00000000730	r3hdm4	100	60.150	Labrus_bergylta
ENSGAGG00000019698	R3HDM4	100	72.901	ENSLACG00000016445	R3HDM4	100	72.901	Latimeria_chalumnae
ENSGAGG00000019698	R3HDM4	100	64.639	ENSLOCG00000002423	r3hdm4	100	64.639	Lepisosteus_oculatus
ENSGAGG00000019698	R3HDM4	90	69.748	ENSLAFG00000017796	R3HDM4	92	69.748	Loxodonta_africana
ENSGAGG00000019698	R3HDM4	98	67.954	ENSMFAG00000044131	R3HDM4	97	67.954	Macaca_fascicularis
ENSGAGG00000019698	R3HDM4	84	72.197	ENSMMUG00000009682	R3HDM4	90	72.197	Macaca_mulatta
ENSGAGG00000019698	R3HDM4	91	70.833	ENSMNEG00000044115	R3HDM4	97	70.833	Macaca_nemestrina
ENSGAGG00000019698	R3HDM4	91	69.835	ENSMLEG00000035693	R3HDM4	90	68.980	Mandrillus_leucophaeus
ENSGAGG00000019698	R3HDM4	87	60.944	ENSMAMG00000005652	r3hdm4	91	60.944	Mastacembelus_armatus
ENSGAGG00000019698	R3HDM4	92	70.082	ENSMAUG00000010611	R3hdm4	94	70.248	Mesocricetus_auratus
ENSGAGG00000019698	R3HDM4	99	67.176	ENSMICG00000010124	R3HDM4	96	67.176	Microcebus_murinus
ENSGAGG00000019698	R3HDM4	97	66.148	ENSMOCG00000002646	R3hdm4	96	66.537	Microtus_ochrogaster
ENSGAGG00000019698	R3HDM4	100	60.448	ENSMMOG00000008253	r3hdm4	100	60.526	Mola_mola
ENSGAGG00000019698	R3HDM4	87	75.983	ENSMODG00000005698	R3HDM4	99	75.983	Monodelphis_domestica
ENSGAGG00000019698	R3HDM4	100	60.526	ENSMALG00000018856	r3hdm4	100	60.526	Monopterus_albus
ENSGAGG00000019698	R3HDM4	99	65.019	MGP_CAROLIEiJ_G0015551	R3hdm4	99	65.399	Mus_caroli
ENSGAGG00000019698	R3HDM4	99	64.639	ENSMUSG00000035781	R3hdm4	99	65.019	Mus_musculus
ENSGAGG00000019698	R3HDM4	99	63.806	MGP_PahariEiJ_G0030964	R3hdm4	94	66.403	Mus_pahari
ENSGAGG00000019698	R3HDM4	99	64.639	MGP_SPRETEiJ_G0016369	-	84	65.019	Mus_spretus
ENSGAGG00000019698	R3HDM4	91	70.833	ENSMPUG00000009394	R3HDM4	89	70.833	Mustela_putorius_furo
ENSGAGG00000019698	R3HDM4	100	61.278	ENSNBRG00000004438	r3hdm4	100	61.654	Neolamprologus_brichardi
ENSGAGG00000019698	R3HDM4	85	67.965	ENSNLEG00000001022	R3HDM4	100	67.965	Nomascus_leucogenys
ENSGAGG00000019698	R3HDM4	90	74.153	ENSMEUG00000011020	R3HDM4	99	74.153	Notamacropus_eugenii
ENSGAGG00000019698	R3HDM4	97	66.926	ENSODEG00000011745	R3HDM4	96	66.926	Octodon_degus
ENSGAGG00000019698	R3HDM4	100	62.030	ENSONIG00000012675	r3hdm4	92	62.406	Oreochromis_niloticus
ENSGAGG00000019698	R3HDM4	100	59.623	ENSOMEG00000003005	r3hdm4	100	59.623	Oryzias_melastigma
ENSGAGG00000019698	R3HDM4	91	69.008	ENSOGAG00000025656	R3HDM4	91	69.008	Otolemur_garnettii
ENSGAGG00000019698	R3HDM4	91	71.250	ENSOARG00000009945	R3HDM4	98	71.250	Ovis_aries
ENSGAGG00000019698	R3HDM4	94	69.076	ENSPPAG00000042371	R3HDM4	99	69.547	Pan_paniscus
ENSGAGG00000019698	R3HDM4	98	67.954	ENSPANG00000015203	R3HDM4	97	67.954	Papio_anubis
ENSGAGG00000019698	R3HDM4	100	58.175	ENSPKIG00000007421	r3hdm4	100	58.175	Paramormyrops_kingsleyae
ENSGAGG00000019698	R3HDM4	88	59.483	ENSPMGG00000020467	r3hdm4	89	59.483	Periophthalmus_magnuspinnatus
ENSGAGG00000019698	R3HDM4	91	69.710	ENSPEMG00000008365	Tmem259	99	69.710	Peromyscus_maniculatus_bairdii
ENSGAGG00000019698	R3HDM4	100	59.623	ENSPFOG00000003199	r3hdm4	100	59.623	Poecilia_formosa
ENSGAGG00000019698	R3HDM4	100	59.623	ENSPMEG00000014183	r3hdm4	100	59.623	Poecilia_mexicana
ENSGAGG00000019698	R3HDM4	100	60.000	ENSPREG00000010709	r3hdm4	100	60.000	Poecilia_reticulata
ENSGAGG00000019698	R3HDM4	97	67.578	ENSPPYG00000009297	R3HDM4	96	67.578	Pongo_abelii
ENSGAGG00000019698	R3HDM4	58	70.395	ENSPCAG00000010997	R3HDM4	56	70.395	Procavia_capensis
ENSGAGG00000019698	R3HDM4	99	67.176	ENSPCOG00000016785	R3HDM4	96	67.176	Propithecus_coquereli
ENSGAGG00000019698	R3HDM4	100	61.654	ENSPNYG00000017489	r3hdm4	100	62.030	Pundamilia_nyererei
ENSGAGG00000019698	R3HDM4	92	67.078	ENSRNOG00000011489	R3hdm4	92	67.490	Rattus_norvegicus
ENSGAGG00000019698	R3HDM4	91	70.417	ENSRROG00000028842	R3HDM4	90	70.417	Rhinopithecus_roxellana
ENSGAGG00000019698	R3HDM4	92	67.206	ENSSBOG00000019298	R3HDM4	72	67.611	Saimiri_boliviensis_boliviensis
ENSGAGG00000019698	R3HDM4	56	81.507	ENSSHAG00000003036	-	100	81.507	Sarcophilus_harrisii
ENSGAGG00000019698	R3HDM4	89	65.106	ENSSFOG00015020574	r3hdm4	86	65.106	Scleropages_formosus
ENSGAGG00000019698	R3HDM4	100	59.623	ENSSMAG00000021090	r3hdm4	74	59.623	Scophthalmus_maximus
ENSGAGG00000019698	R3HDM4	100	62.782	ENSSDUG00000008488	r3hdm4	100	62.782	Seriola_dumerili
ENSGAGG00000019698	R3HDM4	100	62.782	ENSSLDG00000025328	r3hdm4	100	62.782	Seriola_lalandi_dorsalis
ENSGAGG00000019698	R3HDM4	92	86.777	ENSSPUG00000005434	R3HDM4	95	86.777	Sphenodon_punctatus
ENSGAGG00000019698	R3HDM4	99	58.113	ENSSPAG00000002562	r3hdm4	99	58.113	Stegastes_partitus
ENSGAGG00000019698	R3HDM4	98	67.692	ENSSSCG00000013419	R3HDM4	94	67.692	Sus_scrofa
ENSGAGG00000019698	R3HDM4	78	72.249	ENSTGUG00000000663	R3HDM4	100	72.727	Taeniopygia_guttata
ENSGAGG00000019698	R3HDM4	91	69.583	ENSTTRG00000001470	R3HDM4	98	70.000	Tursiops_truncatus
ENSGAGG00000019698	R3HDM4	99	59.387	ENSUAMG00000005751	R3HDM4	100	72.646	Ursus_americanus
ENSGAGG00000019698	R3HDM4	98	67.308	ENSVVUG00000022685	R3HDM4	94	67.308	Vulpes_vulpes
ENSGAGG00000019698	R3HDM4	93	54.435	ENSXETG00000033624	R3HDM4	95	54.435	Xenopus_tropicalis
ENSGAGG00000019698	R3HDM4	100	59.774	ENSXCOG00000005127	r3hdm4	100	59.774	Xiphophorus_couchianus
ENSGAGG00000019698	R3HDM4	100	60.000	ENSXMAG00000022875	r3hdm4	100	60.000	Xiphophorus_maculatus