EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000019882 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 50837 bases
Position: chrPPEB01001478.1:41061-91897
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000027347	ResIII	PF04851.15	2.6e-11	1	1
ENSGAGP00000027347	DEAD	PF00270.29	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000031062	SMARCA5-201	3846	-	ENSGAGP00000027347	1040 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000019882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000019882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000019882	SMARCA5	52	43.942	ENSGAGG00000014432	CHD1L	62	43.942
ENSGAGG00000019882	SMARCA5	93	88.260	ENSGAGG00000023575	SMARCA1	99	88.260
ENSGAGG00000019882	SMARCA5	50	44.139	ENSGAGG00000013176	-	67	43.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000019882	SMARCA5	96	98.094	ENSG00000153147	SMARCA5	96	96.940	Homo_sapiens
ENSGAGG00000019882	SMARCA5	96	98.198	ENSAMEG00000009585	SMARCA5	96	97.438	Ailuropoda_melanoleuca
ENSGAGG00000019882	SMARCA5	93	97.536	ENSAPLG00000009206	SMARCA5	100	97.536	Anas_platyrhynchos
ENSGAGG00000019882	SMARCA5	95	97.482	ENSACAG00000003038	SMARCA5	98	95.874	Anolis_carolinensis
ENSGAGG00000019882	SMARCA5	96	98.195	ENSANAG00000019345	SMARCA5	99	97.994	Aotus_nancymaae
ENSGAGG00000019882	SMARCA5	98	96.569	ENSBTAG00000003399	SMARCA5	96	97.233	Bos_taurus
ENSGAGG00000019882	SMARCA5	96	98.295	ENSCJAG00000002735	SMARCA5	96	97.137	Callithrix_jacchus
ENSGAGG00000019882	SMARCA5	97	97.044	ENSCAFG00000007525	SMARCA5	96	97.340	Canis_familiaris
ENSGAGG00000019882	SMARCA5	95	97.085	ENSCAFG00020025641	SMARCA5	96	97.387	Canis_lupus_dingo
ENSGAGG00000019882	SMARCA5	97	95.665	ENSCHIG00000016375	-	99	94.461	Capra_hircus
ENSGAGG00000019882	SMARCA5	97	97.340	ENSCHIG00000013730	-	96	97.340	Capra_hircus
ENSGAGG00000019882	SMARCA5	100	95.110	ENSTSYG00000009954	SMARCA5	99	98.290	Carlito_syrichta
ENSGAGG00000019882	SMARCA5	97	94.401	ENSCAPG00000013747	SMARCA5	99	94.401	Cavia_aperea
ENSGAGG00000019882	SMARCA5	96	97.994	ENSCPOG00000002259	SMARCA5	97	96.559	Cavia_porcellus
ENSGAGG00000019882	SMARCA5	96	98.295	ENSCCAG00000027215	SMARCA5	99	98.094	Cebus_capucinus
ENSGAGG00000019882	SMARCA5	96	98.195	ENSCATG00000044917	SMARCA5	96	97.038	Cercocebus_atys
ENSGAGG00000019882	SMARCA5	96	98.189	ENSCLAG00000006153	SMARCA5	100	98.189	Chinchilla_lanigera
ENSGAGG00000019882	SMARCA5	93	98.351	ENSCSAG00000003448	SMARCA5	100	98.351	Chlorocebus_sabaeus
ENSGAGG00000019882	SMARCA5	89	97.156	ENSCHOG00000011724	SMARCA5	88	97.156	Choloepus_hoffmanni
ENSGAGG00000019882	SMARCA5	100	99.327	ENSCPBG00000027535	SMARCA5	100	99.327	Chrysemys_picta_bellii
ENSGAGG00000019882	SMARCA5	96	98.293	ENSCANG00000041629	SMARCA5	96	97.137	Colobus_angolensis_palliatus
ENSGAGG00000019882	SMARCA5	97	97.815	ENSCGRG00001012719	Smarca5	96	97.154	Cricetulus_griseus_chok1gshd
ENSGAGG00000019882	SMARCA5	96	98.290	ENSCGRG00000001417	Smarca5	99	98.290	Cricetulus_griseus_crigri
ENSGAGG00000019882	SMARCA5	96	95.518	ENSDNOG00000009158	SMARCA5	95	95.518	Dasypus_novemcinctus
ENSGAGG00000019882	SMARCA5	91	89.989	ENSDORG00000003466	Smarca5	97	89.989	Dipodomys_ordii
ENSGAGG00000019882	SMARCA5	93	85.655	ENSEBUG00000014773	SMARCA5	96	85.655	Eptatretus_burgeri
ENSGAGG00000019882	SMARCA5	96	98.198	ENSEASG00005001866	SMARCA5	98	98.426	Equus_asinus_asinus
ENSGAGG00000019882	SMARCA5	96	98.198	ENSECAG00000002676	SMARCA5	96	97.431	Equus_caballus
ENSGAGG00000019882	SMARCA5	96	94.064	ENSEEUG00000013176	SMARCA5	100	94.064	Erinaceus_europaeus
ENSGAGG00000019882	SMARCA5	93	89.485	ENSELUG00000014653	SMARCA5	99	89.485	Esox_lucius
ENSGAGG00000019882	SMARCA5	96	98.198	ENSFCAG00000004544	SMARCA5	96	97.438	Felis_catus
ENSGAGG00000019882	SMARCA5	93	98.351	ENSFALG00000004987	SMARCA5	100	98.351	Ficedula_albicollis
ENSGAGG00000019882	SMARCA5	96	98.390	ENSFDAG00000021016	SMARCA5	100	98.390	Fukomys_damarensis
ENSGAGG00000019882	SMARCA5	98	86.654	ENSGMOG00000007519	SMARCA5	94	89.560	Gadus_morhua
ENSGAGG00000019882	SMARCA5	96	98.494	ENSGALG00000009913	SMARCA5	98	97.340	Gallus_gallus
ENSGAGG00000019882	SMARCA5	94	90.788	ENSGACG00000017238	SMARCA5	98	88.462	Gasterosteus_aculeatus
ENSGAGG00000019882	SMARCA5	96	98.189	ENSGGOG00000012595	SMARCA5	99	98.189	Gorilla_gorilla
ENSGAGG00000019882	SMARCA5	97	87.735	ENSHGLG00000000317	-	97	87.586	Heterocephalus_glaber_female
ENSGAGG00000019882	SMARCA5	96	97.998	ENSHGLG00000000816	-	96	96.752	Heterocephalus_glaber_female
ENSGAGG00000019882	SMARCA5	96	98.290	ENSHGLG00100018421	-	100	98.290	Heterocephalus_glaber_male
ENSGAGG00000019882	SMARCA5	96	98.398	ENSSTOG00000010683	SMARCA5	96	97.340	Ictidomys_tridecemlineatus
ENSGAGG00000019882	SMARCA5	96	97.900	ENSJJAG00000014965	Smarca5	97	96.946	Jaculus_jaculus
ENSGAGG00000019882	SMARCA5	95	95.762	ENSLACG00000007091	SMARCA5	97	95.762	Latimeria_chalumnae
ENSGAGG00000019882	SMARCA5	95	92.487	ENSLOCG00000008966	SMARCA5	98	90.963	Lepisosteus_oculatus
ENSGAGG00000019882	SMARCA5	96	98.397	ENSLAFG00000007795	SMARCA5	96	97.431	Loxodonta_africana
ENSGAGG00000019882	SMARCA5	96	98.195	ENSMFAG00000043649	SMARCA5	96	97.038	Macaca_fascicularis
ENSGAGG00000019882	SMARCA5	96	98.195	ENSMMUG00000000829	SMARCA5	97	98.419	Macaca_mulatta
ENSGAGG00000019882	SMARCA5	96	98.195	ENSMNEG00000031916	SMARCA5	96	97.038	Macaca_nemestrina
ENSGAGG00000019882	SMARCA5	96	98.195	ENSMLEG00000042393	SMARCA5	96	97.038	Mandrillus_leucophaeus
ENSGAGG00000019882	SMARCA5	96	98.098	ENSMGAG00000003517	SMARCA5	99	98.098	Meleagris_gallopavo
ENSGAGG00000019882	SMARCA5	96	98.390	ENSMAUG00000015902	Smarca5	98	98.390	Mesocricetus_auratus
ENSGAGG00000019882	SMARCA5	96	98.000	ENSMICG00000003971	SMARCA5	99	96.700	Microcebus_murinus
ENSGAGG00000019882	SMARCA5	98	96.866	ENSMOCG00000016986	-	97	96.758	Microtus_ochrogaster
ENSGAGG00000019882	SMARCA5	99	95.532	ENSMODG00000000391	SMARCA5	99	95.532	Monodelphis_domestica
ENSGAGG00000019882	SMARCA5	96	97.800	ENSMUSG00000031715	Smarca5	96	97.143	Mus_musculus
ENSGAGG00000019882	SMARCA5	96	98.000	MGP_PahariEiJ_G0022862	Smarca5	96	97.340	Mus_pahari
ENSGAGG00000019882	SMARCA5	96	98.298	ENSMLUG00000000468	SMARCA5	96	97.537	Myotis_lucifugus
ENSGAGG00000019882	SMARCA5	98	96.680	ENSNGAG00000000441	Smarca5	96	97.431	Nannospalax_galili
ENSGAGG00000019882	SMARCA5	96	98.195	ENSNLEG00000005383	SMARCA5	96	97.038	Nomascus_leucogenys
ENSGAGG00000019882	SMARCA5	93	91.228	ENSMEUG00000001267	SMARCA5	100	91.228	Notamacropus_eugenii
ENSGAGG00000019882	SMARCA5	86	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSGAGG00000019882	SMARCA5	93	98.969	ENSOANG00000013921	SMARCA5	100	98.969	Ornithorhynchus_anatinus
ENSGAGG00000019882	SMARCA5	93	98.557	ENSOCUG00000013042	SMARCA5	100	98.557	Oryctolagus_cuniculus
ENSGAGG00000019882	SMARCA5	96	98.000	ENSOGAG00000009702	SMARCA5	96	97.241	Otolemur_garnettii
ENSGAGG00000019882	SMARCA5	97	96.952	ENSOARG00000010589	SMARCA5	96	96.952	Ovis_aries
ENSGAGG00000019882	SMARCA5	96	98.290	ENSPPAG00000028523	SMARCA5	99	98.290	Pan_paniscus
ENSGAGG00000019882	SMARCA5	96	92.392	ENSPPRG00000004925	SMARCA5	96	92.611	Panthera_pardus
ENSGAGG00000019882	SMARCA5	97	97.423	ENSPTIG00000020959	SMARCA5	97	97.423	Panthera_tigris_altaica
ENSGAGG00000019882	SMARCA5	96	98.189	ENSPTRG00000016472	SMARCA5	99	98.189	Pan_troglodytes
ENSGAGG00000019882	SMARCA5	96	98.195	ENSPANG00000001175	SMARCA5	96	97.038	Papio_anubis
ENSGAGG00000019882	SMARCA5	94	90.779	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSGAGG00000019882	SMARCA5	96	89.621	ENSPKIG00000015885	SMARCA5	100	91.546	Paramormyrops_kingsleyae
ENSGAGG00000019882	SMARCA5	96	96.891	ENSPSIG00000004177	SMARCA5	100	96.891	Pelodiscus_sinensis
ENSGAGG00000019882	SMARCA5	93	90.432	ENSPMGG00000012316	SMARCA5	100	90.432	Periophthalmus_magnuspinnatus
ENSGAGG00000019882	SMARCA5	96	97.705	ENSPEMG00000008060	Smarca5	98	97.705	Peromyscus_maniculatus_bairdii
ENSGAGG00000019882	SMARCA5	97	69.646	ENSPMAG00000006011	SMARCA5	83	83.308	Petromyzon_marinus
ENSGAGG00000019882	SMARCA5	61	86.895	ENSPMAG00000008026	SMARCA5	99	86.895	Petromyzon_marinus
ENSGAGG00000019882	SMARCA5	99	96.887	ENSPCIG00000003926	SMARCA5	96	97.927	Phascolarctos_cinereus
ENSGAGG00000019882	SMARCA5	96	98.195	ENSPPYG00000015091	SMARCA5	96	97.329	Pongo_abelii
ENSGAGG00000019882	SMARCA5	86	86.507	ENSPCAG00000014230	SMARCA5	88	89.114	Procavia_capensis
ENSGAGG00000019882	SMARCA5	96	95.100	ENSPCOG00000026744	SMARCA5	99	94.874	Propithecus_coquereli
ENSGAGG00000019882	SMARCA5	96	98.098	ENSPVAG00000006482	SMARCA5	96	97.332	Pteropus_vampyrus
ENSGAGG00000019882	SMARCA5	98	88.922	ENSPNAG00000027824	SMARCA5	97	90.570	Pygocentrus_nattereri
ENSGAGG00000019882	SMARCA5	96	98.394	ENSRNOG00000018149	Smarca5	100	98.394	Rattus_norvegicus
ENSGAGG00000019882	SMARCA5	96	98.191	ENSRBIG00000044644	SMARCA5	96	97.041	Rhinopithecus_bieti
ENSGAGG00000019882	SMARCA5	96	98.191	ENSRROG00000029591	SMARCA5	99	98.191	Rhinopithecus_roxellana
ENSGAGG00000019882	SMARCA5	96	98.295	ENSSBOG00000036257	SMARCA5	96	97.137	Saimiri_boliviensis_boliviensis
ENSGAGG00000019882	SMARCA5	96	98.893	ENSSHAG00000008464	SMARCA5	100	98.893	Sarcophilus_harrisii
ENSGAGG00000019882	SMARCA5	98	88.878	ENSSFOG00015013252	SMARCA5	97	90.040	Scleropages_formosus
ENSGAGG00000019882	SMARCA5	100	93.558	ENSSPUG00000007604	SMARCA5	99	97.186	Sphenodon_punctatus
ENSGAGG00000019882	SMARCA5	98	95.556	ENSSSCG00000009047	SMARCA5	97	96.955	Sus_scrofa
ENSGAGG00000019882	SMARCA5	96	97.405	ENSTGUG00000002408	SMARCA5	99	97.405	Taeniopygia_guttata
ENSGAGG00000019882	SMARCA5	94	98.465	ENSUAMG00000023495	SMARCA5	95	97.684	Ursus_americanus
ENSGAGG00000019882	SMARCA5	96	98.108	ENSUMAG00000015324	SMARCA5	97	98.108	Ursus_maritimus
ENSGAGG00000019882	SMARCA5	96	98.098	ENSVPAG00000008982	SMARCA5	96	97.340	Vicugna_pacos
ENSGAGG00000019882	SMARCA5	98	96.758	ENSVVUG00000017473	SMARCA5	97	97.151	Vulpes_vulpes
ENSGAGG00000019882	SMARCA5	93	91.967	ENSXETG00000017566	smarca5	97	91.967	Xenopus_tropicalis