EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000019886 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 19362 bases
Position: chrPPEB01004678.1:95807-115168
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000027353	MMR_HSR1	PF01926.23	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000031068	-	997	-	ENSGAGP00000027353	189 (aa)	-	UPI0002C23F08

Gene Model

Click here to download ENSGAGG00000019886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000019886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000019886	-	87	34.503	ENSGAGG00000004474	RAB30	84	34.503
ENSGAGG00000019886	-	83	37.107	ENSGAGG00000004918	-	74	37.086
ENSGAGG00000019886	-	85	38.272	ENSGAGG00000014814	RAB11A	69	37.333
ENSGAGG00000019886	-	85	32.927	ENSGAGG00000004921	RAB42	80	32.927
ENSGAGG00000019886	-	93	33.898	ENSGAGG00000023956	RAB1B	86	33.898
ENSGAGG00000019886	-	85	33.529	ENSGAGG00000015067	RASL11A	72	33.529
ENSGAGG00000019886	-	87	32.530	ENSGAGG00000015642	-	81	32.530
ENSGAGG00000019886	-	89	37.647	ENSGAGG00000000742	-	96	35.751
ENSGAGG00000019886	-	92	33.333	ENSGAGG00000020703	RAB25	77	31.928
ENSGAGG00000019886	-	85	36.420	ENSGAGG00000020702	-	69	35.333
ENSGAGG00000019886	-	60	33.043	ENSGAGG00000022981	-	60	33.654
ENSGAGG00000019886	-	84	34.161	ENSGAGG00000022039	-	73	32.450
ENSGAGG00000019886	-	84	34.146	ENSGAGG00000017981	RAB9A	76	32.680
ENSGAGG00000019886	-	96	32.258	ENSGAGG00000001505	NKIRAS1	97	32.258
ENSGAGG00000019886	-	99	85.638	ENSGAGG00000017673	NRAS	99	85.638
ENSGAGG00000019886	-	87	30.814	ENSGAGG00000007636	RASL11B	69	30.814
ENSGAGG00000019886	-	86	32.121	ENSGAGG00000004988	RAB14	71	31.373
ENSGAGG00000019886	-	98	56.316	ENSGAGG00000025053	RRAS2	94	56.316
ENSGAGG00000019886	-	97	35.354	ENSGAGG00000002936	RAB33B	81	34.946
ENSGAGG00000019886	-	94	35.519	ENSGAGG00000012557	-	78	34.503
ENSGAGG00000019886	-	74	50.000	ENSGAGG00000016932	-	96	50.000
ENSGAGG00000019886	-	71	31.884	ENSGAGG00000020394	RAB7B	76	30.400
ENSGAGG00000019886	-	85	34.568	ENSGAGG00000023041	RAB2B	69	34.000
ENSGAGG00000019886	-	87	56.886	ENSGAGG00000020094	MRAS	95	51.531
ENSGAGG00000019886	-	86	38.554	ENSGAGG00000008447	RAB39B	78	38.554
ENSGAGG00000019886	-	93	34.463	ENSGAGG00000006802	RAB1A	84	34.463
ENSGAGG00000019886	-	84	34.756	ENSGAGG00000012314	RAB9B	76	33.333
ENSGAGG00000019886	-	85	35.802	ENSGAGG00000005606	RAB2A	70	35.333
ENSGAGG00000019886	-	88	41.667	ENSGAGG00000021838	RERG	84	41.667
ENSGAGG00000019886	-	98	30.151	ENSGAGG00000021701	RAB6A	95	30.151
ENSGAGG00000019886	-	99	86.772	ENSGAGG00000011057	KRAS	99	86.772
ENSGAGG00000019886	-	84	30.178	ENSGAGG00000024347	-	68	30.178
ENSGAGG00000019886	-	91	90.698	ENSGAGG00000011790	-	99	85.638
ENSGAGG00000019886	-	87	31.765	ENSGAGG00000009488	RAB33A	75	31.765
ENSGAGG00000019886	-	83	31.646	ENSGAGG00000022371	-	75	31.646
ENSGAGG00000019886	-	85	31.902	ENSGAGG00000005319	RAB5A	75	31.902
ENSGAGG00000019886	-	81	38.065	ENSGAGG00000017207	RAB35	76	38.065
ENSGAGG00000019886	-	79	30.263	ENSGAGG00000012709	RAB23	63	30.263

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000019886	-	100	97.354	ENSG00000174775	HRAS	100	97.354	Homo_sapiens
ENSGAGG00000019886	-	100	95.767	ENSAPOG00000023684	hrasb	100	95.767	Acanthochromis_polyacanthus
ENSGAGG00000019886	-	100	94.180	ENSAMEG00000010515	HRAS	75	94.180	Ailuropoda_melanoleuca
ENSGAGG00000019886	-	100	95.767	ENSACIG00000000699	hrasb	100	95.767	Amphilophus_citrinellus
ENSGAGG00000019886	-	100	95.767	ENSAOCG00000011843	hrasb	100	95.767	Amphiprion_ocellaris
ENSGAGG00000019886	-	100	95.767	ENSAPEG00000009546	hrasb	100	95.767	Amphiprion_percula
ENSGAGG00000019886	-	100	95.767	ENSATEG00000020001	hrasb	100	95.767	Anabas_testudineus
ENSGAGG00000019886	-	87	99.390	ENSAPLG00000012248	HRAS	100	99.390	Anas_platyrhynchos
ENSGAGG00000019886	-	100	98.942	ENSACAG00000014920	HRAS	100	98.942	Anolis_carolinensis
ENSGAGG00000019886	-	100	97.354	ENSANAG00000034201	HRAS	100	97.354	Aotus_nancymaae
ENSGAGG00000019886	-	100	95.238	ENSACLG00000001181	hrasb	100	95.238	Astatotilapia_calliptera
ENSGAGG00000019886	-	100	96.296	ENSAMXG00000035885	hrasa	100	96.296	Astyanax_mexicanus
ENSGAGG00000019886	-	100	95.238	ENSAMXG00000033907	hrasb	100	95.238	Astyanax_mexicanus
ENSGAGG00000019886	-	100	93.122	ENSBTAG00000046644	HRAS	100	93.122	Bos_taurus
ENSGAGG00000019886	-	96	76.796	WBGene00002335	let-60	98	76.796	Caenorhabditis_elegans
ENSGAGG00000019886	-	100	97.354	ENSCJAG00000012199	HRAS	100	97.354	Callithrix_jacchus
ENSGAGG00000019886	-	79	98.000	ENSCAFG00000031029	HRAS	60	98.000	Canis_familiaris
ENSGAGG00000019886	-	89	97.619	ENSCAFG00020007059	HRAS	89	98.013	Canis_lupus_dingo
ENSGAGG00000019886	-	100	93.651	ENSCHIG00000004808	HRAS	100	93.651	Capra_hircus
ENSGAGG00000019886	-	100	97.354	ENSTSYG00000003745	HRAS	100	97.354	Carlito_syrichta
ENSGAGG00000019886	-	100	96.825	ENSCAPG00000000745	HRAS	100	96.825	Cavia_aperea
ENSGAGG00000019886	-	100	96.825	ENSCPOG00000000101	HRAS	100	96.825	Cavia_porcellus
ENSGAGG00000019886	-	100	97.354	ENSCCAG00000031453	HRAS	100	97.354	Cebus_capucinus
ENSGAGG00000019886	-	100	97.354	ENSCATG00000031194	HRAS	100	97.354	Cercocebus_atys
ENSGAGG00000019886	-	100	96.825	ENSCLAG00000002823	HRAS	100	96.825	Chinchilla_lanigera
ENSGAGG00000019886	-	100	97.354	ENSCSAG00000011033	HRAS	100	97.354	Chlorocebus_sabaeus
ENSGAGG00000019886	-	100	100.000	ENSCPBG00000013941	-	100	100.000	Chrysemys_picta_bellii
ENSGAGG00000019886	-	100	97.354	ENSCANG00000017827	HRAS	100	97.354	Colobus_angolensis_palliatus
ENSGAGG00000019886	-	100	97.354	ENSCGRG00001018735	Hras	100	97.354	Cricetulus_griseus_chok1gshd
ENSGAGG00000019886	-	100	97.354	ENSCGRG00000010918	Hras	100	97.354	Cricetulus_griseus_crigri
ENSGAGG00000019886	-	100	95.767	ENSCSEG00000007927	hrasb	100	95.767	Cynoglossus_semilaevis
ENSGAGG00000019886	-	100	95.238	ENSCVAG00000008670	hrasb	100	95.238	Cyprinodon_variegatus
ENSGAGG00000019886	-	100	95.238	ENSDARG00000005651	hrasb	100	97.917	Danio_rerio
ENSGAGG00000019886	-	100	94.709	ENSDARG00000098497	hrasa	100	94.709	Danio_rerio
ENSGAGG00000019886	-	88	89.222	ENSDARG00000013161	zgc:55558	89	89.222	Danio_rerio
ENSGAGG00000019886	-	99	94.149	ENSDNOG00000015293	HRAS	99	94.149	Dasypus_novemcinctus
ENSGAGG00000019886	-	100	97.354	ENSDORG00000028079	Hras	100	97.354	Dipodomys_ordii
ENSGAGG00000019886	-	93	80.663	FBgn0003205	Ras85D	96	80.663	Drosophila_melanogaster
ENSGAGG00000019886	-	100	96.825	ENSETEG00000019899	HRAS	100	96.825	Echinops_telfairi
ENSGAGG00000019886	-	100	90.476	ENSEBUG00000004670	hrasb	100	90.476	Eptatretus_burgeri
ENSGAGG00000019886	-	100	95.238	ENSECAG00000008473	HRAS	100	95.238	Equus_caballus
ENSGAGG00000019886	-	79	96.667	ENSEEUG00000014548	HRAS	87	96.667	Erinaceus_europaeus
ENSGAGG00000019886	-	100	95.767	ENSELUG00000004712	HRAS	100	95.767	Esox_lucius
ENSGAGG00000019886	-	100	95.238	ENSFCAG00000002990	HRAS	100	95.238	Felis_catus
ENSGAGG00000019886	-	100	98.942	ENSFALG00000012145	HRAS	100	98.942	Ficedula_albicollis
ENSGAGG00000019886	-	100	97.354	ENSFDAG00000006760	HRAS	100	97.354	Fukomys_damarensis
ENSGAGG00000019886	-	100	94.709	ENSFHEG00000010055	hrasb	100	94.709	Fundulus_heteroclitus
ENSGAGG00000019886	-	94	97.191	ENSGMOG00000010196	hrasb	96	97.191	Gadus_morhua
ENSGAGG00000019886	-	100	99.471	ENSGALG00000029260	H-RAS	100	99.471	Gallus_gallus
ENSGAGG00000019886	-	100	95.767	ENSGAFG00000021814	hrasb	100	95.767	Gambusia_affinis
ENSGAGG00000019886	-	100	95.767	ENSGACG00000011340	hrasb	100	95.767	Gasterosteus_aculeatus
ENSGAGG00000019886	-	100	96.825	ENSGGOG00000015438	HRAS	100	96.825	Gorilla_gorilla
ENSGAGG00000019886	-	100	95.238	ENSHBUG00000011998	hrasb	100	95.238	Haplochromis_burtoni
ENSGAGG00000019886	-	100	96.825	ENSHGLG00000004508	HRAS	100	96.825	Heterocephalus_glaber_female
ENSGAGG00000019886	-	100	96.825	ENSHGLG00100012888	HRAS	100	96.825	Heterocephalus_glaber_male
ENSGAGG00000019886	-	100	95.238	ENSIPUG00000022502	hrasb	100	95.238	Ictalurus_punctatus
ENSGAGG00000019886	-	100	95.238	ENSIPUG00000006053	hras	100	95.238	Ictalurus_punctatus
ENSGAGG00000019886	-	100	97.354	ENSSTOG00000021206	HRAS	100	97.354	Ictidomys_tridecemlineatus
ENSGAGG00000019886	-	100	96.825	ENSJJAG00000022529	-	100	96.825	Jaculus_jaculus
ENSGAGG00000019886	-	100	87.831	ENSJJAG00000011743	-	100	87.831	Jaculus_jaculus
ENSGAGG00000019886	-	100	95.767	ENSKMAG00000001922	Ha-ras	100	95.767	Kryptolebias_marmoratus
ENSGAGG00000019886	-	100	95.767	ENSLBEG00000001905	hrasb	100	95.767	Labrus_bergylta
ENSGAGG00000019886	-	100	97.354	ENSLACG00000018427	HRAS	100	97.354	Latimeria_chalumnae
ENSGAGG00000019886	-	100	96.825	ENSLOCG00000000684	hrasb	100	96.825	Lepisosteus_oculatus
ENSGAGG00000019886	-	100	97.354	ENSMFAG00000039003	HRAS	100	97.354	Macaca_fascicularis
ENSGAGG00000019886	-	100	97.354	ENSMMUG00000021659	HRAS	100	97.354	Macaca_mulatta
ENSGAGG00000019886	-	100	97.354	ENSMNEG00000039358	HRAS	100	97.354	Macaca_nemestrina
ENSGAGG00000019886	-	100	97.354	ENSMLEG00000042070	HRAS	100	97.354	Mandrillus_leucophaeus
ENSGAGG00000019886	-	100	95.767	ENSMAMG00000004359	hrasb	100	95.767	Mastacembelus_armatus
ENSGAGG00000019886	-	100	95.238	ENSMZEG00005017583	hrasb	100	95.238	Maylandia_zebra
ENSGAGG00000019886	-	100	97.354	ENSMAUG00000020006	Hras	100	97.354	Mesocricetus_auratus
ENSGAGG00000019886	-	100	96.825	ENSMICG00000006472	HRAS	100	96.825	Microcebus_murinus
ENSGAGG00000019886	-	100	97.354	ENSMOCG00000000744	Hras	100	97.354	Microtus_ochrogaster
ENSGAGG00000019886	-	79	98.667	ENSMODG00000016580	HRAS	71	98.667	Monodelphis_domestica
ENSGAGG00000019886	-	100	95.767	ENSMALG00000011273	hrasb	100	95.767	Monopterus_albus
ENSGAGG00000019886	-	100	96.825	MGP_CAROLIEiJ_G0030681	Hras	100	96.825	Mus_caroli
ENSGAGG00000019886	-	100	97.354	ENSMUSG00000025499	Hras	100	97.354	Mus_musculus
ENSGAGG00000019886	-	100	96.825	MGP_PahariEiJ_G0013880	Hras	100	96.825	Mus_pahari
ENSGAGG00000019886	-	100	87.302	MGP_SPRETEiJ_G0031792	-	100	87.302	Mus_spretus
ENSGAGG00000019886	-	100	97.354	ENSNGAG00000022044	Hras	100	97.354	Nannospalax_galili
ENSGAGG00000019886	-	100	97.354	ENSNLEG00000008300	HRAS	100	97.354	Nomascus_leucogenys
ENSGAGG00000019886	-	100	96.825	ENSODEG00000015703	HRAS	100	96.825	Octodon_degus
ENSGAGG00000019886	-	100	95.767	ENSONIG00000014560	hrasb	100	95.767	Oreochromis_niloticus
ENSGAGG00000019886	-	95	84.916	ENSORLG00000024443	zgc:55558	96	84.916	Oryzias_latipes
ENSGAGG00000019886	-	100	95.238	ENSORLG00000018912	hrasb	100	95.238	Oryzias_latipes
ENSGAGG00000019886	-	95	84.916	ENSORLG00020013690	zgc:55558	96	84.916	Oryzias_latipes_hni
ENSGAGG00000019886	-	100	95.238	ENSORLG00020008129	hras	100	95.238	Oryzias_latipes_hni
ENSGAGG00000019886	-	95	84.916	ENSORLG00015003353	zgc:55558	96	84.916	Oryzias_latipes_hsok
ENSGAGG00000019886	-	100	94.180	ENSOMEG00000018719	hrasb	100	94.180	Oryzias_melastigma
ENSGAGG00000019886	-	95	85.475	ENSOMEG00000016685	zgc:55558	96	85.475	Oryzias_melastigma
ENSGAGG00000019886	-	100	95.767	ENSOGAG00000024846	HRAS	100	95.767	Otolemur_garnettii
ENSGAGG00000019886	-	79	97.333	ENSOARG00000007365	HRAS	99	97.333	Ovis_aries
ENSGAGG00000019886	-	100	97.354	ENSPPAG00000028620	HRAS	100	97.354	Pan_paniscus
ENSGAGG00000019886	-	79	98.000	ENSPPRG00000008185	HRAS	88	98.000	Panthera_pardus
ENSGAGG00000019886	-	70	98.496	ENSPTIG00000006043	HRAS	100	98.496	Panthera_tigris_altaica
ENSGAGG00000019886	-	100	97.354	ENSPTRG00000034469	HRAS	100	97.354	Pan_troglodytes
ENSGAGG00000019886	-	100	97.354	ENSPANG00000008022	-	100	97.354	Papio_anubis
ENSGAGG00000019886	-	100	96.825	ENSPANG00000016633	-	100	96.825	Papio_anubis
ENSGAGG00000019886	-	100	95.767	ENSPKIG00000000303	HRAS	100	95.767	Paramormyrops_kingsleyae
ENSGAGG00000019886	-	99	95.213	ENSPKIG00000013507	hrasb	100	94.709	Paramormyrops_kingsleyae
ENSGAGG00000019886	-	100	99.471	ENSPSIG00000014690	HRAS	99	99.471	Pelodiscus_sinensis
ENSGAGG00000019886	-	96	96.685	ENSPMGG00000005812	HRAS	88	96.685	Periophthalmus_magnuspinnatus
ENSGAGG00000019886	-	70	93.233	ENSPMGG00000014517	zgc:55558	94	93.233	Periophthalmus_magnuspinnatus
ENSGAGG00000019886	-	100	97.354	ENSPEMG00000013973	-	100	97.354	Peromyscus_maniculatus_bairdii
ENSGAGG00000019886	-	100	89.418	ENSPMAG00000004548	hrasb	98	89.418	Petromyzon_marinus
ENSGAGG00000019886	-	100	98.413	ENSPCIG00000008359	HRAS	100	98.413	Phascolarctos_cinereus
ENSGAGG00000019886	-	100	95.767	ENSPFOG00000002595	hrasb	100	95.767	Poecilia_formosa
ENSGAGG00000019886	-	100	94.709	ENSPLAG00000003379	hrasb	100	94.709	Poecilia_latipinna
ENSGAGG00000019886	-	100	95.767	ENSPMEG00000020891	hrasb	100	95.767	Poecilia_mexicana
ENSGAGG00000019886	-	100	95.767	ENSPREG00000019341	hrasb	100	95.767	Poecilia_reticulata
ENSGAGG00000019886	-	100	97.354	ENSPPYG00000002868	HRAS	100	97.354	Pongo_abelii
ENSGAGG00000019886	-	100	96.825	ENSPCOG00000021838	HRAS	100	96.825	Propithecus_coquereli
ENSGAGG00000019886	-	100	95.238	ENSPNYG00000015124	hrasb	100	95.238	Pundamilia_nyererei
ENSGAGG00000019886	-	100	95.238	ENSPNAG00000000584	hrasb	100	95.238	Pygocentrus_nattereri
ENSGAGG00000019886	-	100	95.767	ENSPNAG00000014085	hrasa	100	95.767	Pygocentrus_nattereri
ENSGAGG00000019886	-	100	97.354	ENSRNOG00000016611	Hras	100	97.354	Rattus_norvegicus
ENSGAGG00000019886	-	100	97.354	ENSRBIG00000034835	HRAS	100	97.354	Rhinopithecus_bieti
ENSGAGG00000019886	-	100	97.354	ENSRROG00000041325	HRAS	100	97.354	Rhinopithecus_roxellana
ENSGAGG00000019886	-	100	97.354	ENSSBOG00000023272	HRAS	100	97.354	Saimiri_boliviensis_boliviensis
ENSGAGG00000019886	-	98	54.497	ENSSHAG00000004318	-	81	58.537	Sarcophilus_harrisii
ENSGAGG00000019886	-	100	95.238	ENSSFOG00015003051	hrasb	100	95.238	Scleropages_formosus
ENSGAGG00000019886	-	100	95.238	ENSSFOG00015011157	-	100	95.238	Scleropages_formosus
ENSGAGG00000019886	-	100	95.767	ENSSMAG00000008745	hrasb	100	95.767	Scophthalmus_maximus
ENSGAGG00000019886	-	100	95.767	ENSSDUG00000019086	hrasb	100	95.767	Seriola_dumerili
ENSGAGG00000019886	-	100	95.767	ENSSLDG00000012627	hrasb	100	95.767	Seriola_lalandi_dorsalis
ENSGAGG00000019886	-	100	98.942	ENSSPUG00000005243	HRAS	100	98.942	Sphenodon_punctatus
ENSGAGG00000019886	-	100	95.238	ENSSPAG00000007357	hrasb	100	95.238	Stegastes_partitus
ENSGAGG00000019886	-	100	94.709	ENSSSCG00000031513	HRAS	100	94.709	Sus_scrofa
ENSGAGG00000019886	-	100	98.942	ENSTGUG00000009877	HRAS	100	98.942	Taeniopygia_guttata
ENSGAGG00000019886	-	100	94.709	ENSTRUG00000024825	hrasb	100	94.709	Takifugu_rubripes
ENSGAGG00000019886	-	100	94.709	ENSTNIG00000011385	hrasb	100	94.709	Tetraodon_nigroviridis
ENSGAGG00000019886	-	100	93.651	ENSTTRG00000011120	HRAS	100	93.651	Tursiops_truncatus
ENSGAGG00000019886	-	100	94.180	ENSUAMG00000027527	-	100	94.180	Ursus_americanus
ENSGAGG00000019886	-	100	94.180	ENSUMAG00000005506	-	100	94.180	Ursus_maritimus
ENSGAGG00000019886	-	100	95.238	ENSVVUG00000017151	HRAS	100	95.238	Vulpes_vulpes
ENSGAGG00000019886	-	100	97.354	ENSXETG00000006040	hras	100	97.354	Xenopus_tropicalis
ENSGAGG00000019886	-	94	98.305	ENSXCOG00000020608	hrasb	94	95.420	Xiphophorus_couchianus
ENSGAGG00000019886	-	100	95.767	ENSXMAG00000015132	hrasb	100	95.767	Xiphophorus_maculatus