EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAGG00000020025 (Gene tree)
Gene ID
-
Gene Symbol
RBFOX3
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Plus strand
Length
110711 bases
Position
chrPPEB01004691.1:36012-146722
Accession
27097
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000027580Fox-1_CPF12414.85.4e-4411
ENSGAGP00000027571Fox-1_CPF12414.86.8e-4411
ENSGAGP00000027575Fox-1_CPF12414.86.8e-4411
ENSGAGP00000027566Fox-1_CPF12414.87.8e-4411
ENSGAGP00000027556Fox-1_CPF12414.81.4e-4311
ENSGAGP00000027559Fox-1_CPF12414.81.7e-4311
ENSGAGP00000027556RRM_1PF00076.221.1e-1811
ENSGAGP00000027559RRM_1PF00076.221.3e-1811
ENSGAGP00000027580RRM_1PF00076.221.6e-1811
ENSGAGP00000027566RRM_1PF00076.221.6e-1811
ENSGAGP00000027575RRM_1PF00076.221.7e-1811
ENSGAGP00000027571RRM_1PF00076.220.0001311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000031307RBFOX3-2012011-ENSGAGP00000027556310 (aa)--
ENSGAGT00000031317RBFOX3-2032496-ENSGAGP00000027566389 (aa)--
ENSGAGT00000031310RBFOX3-2022026-ENSGAGP00000027559341 (aa)--
ENSGAGT00000031329RBFOX3-2052538-ENSGAGP00000027575403 (aa)--
ENSGAGT00000031334RBFOX3-2062417-ENSGAGP00000027580369 (aa)--
ENSGAGT00000031325RBFOX3-2042403-ENSGAGP00000027571358 (aa)--
Gene Model
Click here to download ENSGAGG00000020025's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020025's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAGG00000020025RBFOX310077.143ENSGAGG00000023681RBFOX110066.329
ENSGAGG00000020025RBFOX39962.500ENSGAGG00000025884RBFOX29960.677
ENSGAGG00000020025RBFOX35337.179ENSGAGG00000000589PABPC1L5337.179
ENSGAGG00000020025RBFOX37964.400ENSGAGG00000012440-9464.773
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000020025RBFOX39588.889ENSG00000167281RBFOX39997.297Homo_sapiens
ENSGAGG00000020025RBFOX310083.706ENSAPOG00000021630rbfox3b9884.636Acanthochromis_polyacanthus
ENSGAGG00000020025RBFOX39767.308ENSAPOG00000015658-9760.598Acanthochromis_polyacanthus
ENSGAGG00000020025RBFOX39582.857ENSAMEG00000014170RBFOX39878.385Ailuropoda_melanoleuca
ENSGAGG00000020025RBFOX310079.233ENSACIG00000010817rbfox3b9578.738Amphilophus_citrinellus
ENSGAGG00000020025RBFOX39568.987ENSACIG00000003768-7973.852Amphilophus_citrinellus
ENSGAGG00000020025RBFOX310083.706ENSAOCG00000012358rbfox3b9884.034Amphiprion_ocellaris
ENSGAGG00000020025RBFOX39778.512ENSAOCG00000010786-9677.839Amphiprion_ocellaris
ENSGAGG00000020025RBFOX39671.166ENSAPEG00000015891-9467.979Amphiprion_percula
ENSGAGG00000020025RBFOX310074.121ENSAPEG00000019081rbfox3b9773.889Amphiprion_percula
ENSGAGG00000020025RBFOX39578.000ENSATEG00000023101-9376.568Anabas_testudineus
ENSGAGG00000020025RBFOX310074.052ENSATEG00000019945rbfox3b9674.018Anabas_testudineus
ENSGAGG00000020025RBFOX310089.776ENSACAG00000016093RBFOX310088.827Anolis_carolinensis
ENSGAGG00000020025RBFOX39587.542ENSANAG00000023457RBFOX39587.542Aotus_nancymaae
ENSGAGG00000020025RBFOX310083.067ENSACLG00000020011rbfox3b9881.989Astatotilapia_calliptera
ENSGAGG00000020025RBFOX310081.270ENSACLG00000025552-9881.111Astatotilapia_calliptera
ENSGAGG00000020025RBFOX39779.019ENSAMXG00000037246rbfox3a10080.597Astyanax_mexicanus
ENSGAGG00000020025RBFOX310078.594ENSAMXG00000042841rbfox3b10077.119Astyanax_mexicanus
ENSGAGG00000020025RBFOX38189.683ENSBTAG00000006280RBFOX39574.121Bos_taurus
ENSGAGG00000020025RBFOX39582.770ENSCJAG00000009563RBFOX38883.446Callithrix_jacchus
ENSGAGG00000020025RBFOX37691.597ENSCAFG00000005547RBFOX310085.305Canis_familiaris
ENSGAGG00000020025RBFOX39576.744ENSCAFG00020008126RBFOX39677.374Canis_lupus_dingo
ENSGAGG00000020025RBFOX39575.872ENSCHIG00000009124RBFOX39676.536Capra_hircus
ENSGAGG00000020025RBFOX39576.232ENSTSYG00000029617RBFOX39677.101Carlito_syrichta
ENSGAGG00000020025RBFOX39577.810ENSCPOG00000021703RBFOX39677.285Cavia_porcellus
ENSGAGG00000020025RBFOX39587.542ENSCCAG00000028450RBFOX39587.542Cebus_capucinus
ENSGAGG00000020025RBFOX39588.889ENSCATG00000018349RBFOX39588.889Cercocebus_atys
ENSGAGG00000020025RBFOX39577.971ENSCLAG00000006449RBFOX39677.437Chinchilla_lanigera
ENSGAGG00000020025RBFOX39588.889ENSCSAG00000002355RBFOX39588.889Chlorocebus_sabaeus
ENSGAGG00000020025RBFOX310099.120ENSCPBG00000010904RBFOX310099.120Chrysemys_picta_bellii
ENSGAGG00000020025RBFOX39588.889ENSCANG00000043120RBFOX39588.889Colobus_angolensis_palliatus
ENSGAGG00000020025RBFOX39575.145ENSCGRG00001019476Rbfox39676.389Cricetulus_griseus_chok1gshd
ENSGAGG00000020025RBFOX39575.145ENSCGRG00000003268Rbfox39676.389Cricetulus_griseus_crigri
ENSGAGG00000020025RBFOX310067.619ENSCSEG00000020606RBFOX39864.444Cynoglossus_semilaevis
ENSGAGG00000020025RBFOX39778.571ENSCSEG00000015567RBFOX39678.453Cynoglossus_semilaevis
ENSGAGG00000020025RBFOX310083.706ENSCVAG00000006882rbfox3b9877.716Cyprinodon_variegatus
ENSGAGG00000020025RBFOX310072.258ENSDARG00000074310rbfox3b9689.005Danio_rerio
ENSGAGG00000020025RBFOX39679.063ENSDARG00000010083rbfox3a9979.635Danio_rerio
ENSGAGG00000020025RBFOX37872.414ENSDNOG00000039391RBFOX38668.000Dasypus_novemcinctus
ENSGAGG00000020025RBFOX39568.713ENSDORG00000005352Rbfox39669.663Dipodomys_ordii
ENSGAGG00000020025RBFOX38559.489ENSEBUG00000013559RBFOX37160.392Eptatretus_burgeri
ENSGAGG00000020025RBFOX310071.429ENSEBUG00000002129RBFOX39971.268Eptatretus_burgeri
ENSGAGG00000020025RBFOX39588.629ENSEASG00005005059RBFOX39589.298Equus_asinus_asinus
ENSGAGG00000020025RBFOX39588.294ENSECAG00000023811RBFOX39588.963Equus_caballus
ENSGAGG00000020025RBFOX38484.507ENSEEUG00000013974RBFOX37286.667Erinaceus_europaeus
ENSGAGG00000020025RBFOX36163.492ENSELUG00000009807-5164.444Esox_lucius
ENSGAGG00000020025RBFOX310083.067ENSELUG00000017963rbfox3b9883.288Esox_lucius
ENSGAGG00000020025RBFOX39689.106ENSFCAG00000002555RBFOX310089.106Felis_catus
ENSGAGG00000020025RBFOX39575.610ENSFALG00000012288RBFOX39871.717Ficedula_albicollis
ENSGAGG00000020025RBFOX39572.911ENSFDAG00000007489RBFOX39672.576Fukomys_damarensis
ENSGAGG00000020025RBFOX310073.802ENSFHEG00000008550rbfox3b9581.648Fundulus_heteroclitus
ENSGAGG00000020025RBFOX310064.266ENSGMOG00000019304-9970.303Gadus_morhua
ENSGAGG00000020025RBFOX310096.785ENSGALG00000032889RBFOX310096.348Gallus_gallus
ENSGAGG00000020025RBFOX39781.639ENSGAFG00000005025rbfox3b9777.500Gambusia_affinis
ENSGAGG00000020025RBFOX39567.908ENSGACG00000002138-9668.871Gasterosteus_aculeatus
ENSGAGG00000020025RBFOX39588.889ENSGGOG00000012546RBFOX39588.889Gorilla_gorilla
ENSGAGG00000020025RBFOX310083.333ENSHBUG00000018099rbfox3b9884.097Haplochromis_burtoni
ENSGAGG00000020025RBFOX310080.952ENSHBUG00000023098-9880.938Haplochromis_burtoni
ENSGAGG00000020025RBFOX39577.364ENSHGLG00000008679RBFOX39676.033Heterocephalus_glaber_female
ENSGAGG00000020025RBFOX39573.352ENSHGLG00100014739RBFOX39672.452Heterocephalus_glaber_male
ENSGAGG00000020025RBFOX310070.794ENSHCOG00000001863RBFOX38869.435Hippocampus_comes
ENSGAGG00000020025RBFOX39576.846ENSHCOG00000007444RBFOX37876.333Hippocampus_comes
ENSGAGG00000020025RBFOX310068.421ENSIPUG00000021966rbfox3b10078.731Ictalurus_punctatus
ENSGAGG00000020025RBFOX39879.009ENSIPUG00000012010rbfox3a10078.806Ictalurus_punctatus
ENSGAGG00000020025RBFOX39570.861ENSSTOG00000026817RBFOX39572.152Ictidomys_tridecemlineatus
ENSGAGG00000020025RBFOX39576.744ENSJJAG00000014167Rbfox39677.374Jaculus_jaculus
ENSGAGG00000020025RBFOX310083.706ENSKMAG00000006726rbfox3b9883.754Kryptolebias_marmoratus
ENSGAGG00000020025RBFOX310083.387ENSLBEG00000004030rbfox3b9884.367Labrus_bergylta
ENSGAGG00000020025RBFOX39684.167ENSLBEG00000022508-9882.500Labrus_bergylta
ENSGAGG00000020025RBFOX39776.133ENSLACG00000018409-10073.214Latimeria_chalumnae
ENSGAGG00000020025RBFOX35365.761ENSLACG00000000021-9565.946Latimeria_chalumnae
ENSGAGG00000020025RBFOX39685.843ENSLOCG00000012267rbfox3a10086.747Lepisosteus_oculatus
ENSGAGG00000020025RBFOX39977.436ENSLAFG00000016623RBFOX39977.949Loxodonta_africana
ENSGAGG00000020025RBFOX39576.453ENSMFAG00000002247RBFOX39676.453Macaca_fascicularis
ENSGAGG00000020025RBFOX39588.889ENSMMUG00000023028RBFOX39588.889Macaca_mulatta
ENSGAGG00000020025RBFOX39588.552ENSMNEG00000041147RBFOX39588.552Macaca_nemestrina
ENSGAGG00000020025RBFOX39588.889ENSMLEG00000025686RBFOX39588.889Mandrillus_leucophaeus
ENSGAGG00000020025RBFOX39876.218ENSMAMG00000020600-10073.654Mastacembelus_armatus
ENSGAGG00000020025RBFOX310078.387ENSMAMG00000019810rbfox3b9577.517Mastacembelus_armatus
ENSGAGG00000020025RBFOX310083.333ENSMZEG00005000781rbfox3b9884.097Maylandia_zebra
ENSGAGG00000020025RBFOX39260.502ENSMZEG00005003055-5889.552Maylandia_zebra
ENSGAGG00000020025RBFOX36494.009ENSMGAG00000005600RBFOX38394.495Meleagris_gallopavo
ENSGAGG00000020025RBFOX39576.879ENSMAUG00000013543Rbfox39676.111Mesocricetus_auratus
ENSGAGG00000020025RBFOX310090.354ENSMICG00000014898RBFOX39691.216Microcebus_murinus
ENSGAGG00000020025RBFOX39575.072ENSMOCG00000015373Rbfox39676.602Microtus_ochrogaster
ENSGAGG00000020025RBFOX310080.126ENSMMOG00000020193rbfox3b9876.177Mola_mola
ENSGAGG00000020025RBFOX39690.476ENSMODG00000002089RBFOX310090.476Monodelphis_domestica
ENSGAGG00000020025RBFOX310081.818ENSMALG00000018270-9881.283Monopterus_albus
ENSGAGG00000020025RBFOX310082.692ENSMALG00000020407rbfox3b9882.913Monopterus_albus
ENSGAGG00000020025RBFOX39587.248MGP_CAROLIEiJ_G0017487Rbfox39692.086Mus_caroli
ENSGAGG00000020025RBFOX39588.591ENSMUSG00000025576Rbfox39692.086Mus_musculus
ENSGAGG00000020025RBFOX39587.960MGP_PahariEiJ_G0018614Rbfox39692.806Mus_pahari
ENSGAGG00000020025RBFOX39587.584MGP_SPRETEiJ_G0018331Rbfox39692.086Mus_spretus
ENSGAGG00000020025RBFOX39881.016ENSMPUG00000012319RBFOX39980.688Mustela_putorius_furo
ENSGAGG00000020025RBFOX39576.232ENSNGAG00000018006Rbfox39677.716Nannospalax_galili
ENSGAGG00000020025RBFOX310074.441ENSNBRG00000022885-9273.353Neolamprologus_brichardi
ENSGAGG00000020025RBFOX310082.051ENSNBRG00000010102rbfox3b9876.045Neolamprologus_brichardi
ENSGAGG00000020025RBFOX310062.701ENSNLEG00000000153-9467.136Nomascus_leucogenys
ENSGAGG00000020025RBFOX37193.617ENSMEUG00000004218-7596.552Notamacropus_eugenii
ENSGAGG00000020025RBFOX37787.302ENSOPRG00000016279-7987.368Ochotona_princeps
ENSGAGG00000020025RBFOX39590.268ENSODEG00000009433RBFOX39588.926Octodon_degus
ENSGAGG00000020025RBFOX310081.905ENSONIG00000007282-9680.060Oreochromis_niloticus
ENSGAGG00000020025RBFOX310083.706ENSONIG00000009549rbfox3b9877.716Oreochromis_niloticus
ENSGAGG00000020025RBFOX37666.786ENSOCUG00000014217RBFOX37866.786Oryctolagus_cuniculus
ENSGAGG00000020025RBFOX310083.706ENSORLG00000000905rbfox3b7783.473Oryzias_latipes
ENSGAGG00000020025RBFOX310083.706ENSORLG00020018030rbfox3b9783.473Oryzias_latipes_hni
ENSGAGG00000020025RBFOX310083.387ENSORLG00015009200rbfox3b9783.193Oryzias_latipes_hsok
ENSGAGG00000020025RBFOX37777.821ENSOMEG00000014677rbfox3b8477.987Oryzias_melastigma
ENSGAGG00000020025RBFOX39587.542ENSOGAG00000029595RBFOX39881.644Otolemur_garnettii
ENSGAGG00000020025RBFOX39860.411ENSOARG00000002908RBFOX310061.340Ovis_aries
ENSGAGG00000020025RBFOX38190.476ENSPPAG00000025383RBFOX38890.476Pan_paniscus
ENSGAGG00000020025RBFOX39576.923ENSPPRG00000007819RBFOX39676.923Panthera_pardus
ENSGAGG00000020025RBFOX39588.889ENSPTRG00000009727RBFOX39588.889Pan_troglodytes
ENSGAGG00000020025RBFOX39588.889ENSPANG00000019837RBFOX39588.889Papio_anubis
ENSGAGG00000020025RBFOX39885.882ENSPKIG00000010299rbfox3a9878.610Paramormyrops_kingsleyae
ENSGAGG00000020025RBFOX310067.203ENSPKIG00000022633-10065.775Paramormyrops_kingsleyae
ENSGAGG00000020025RBFOX38581.648ENSPMGG00000008000rbfox3b9781.587Periophthalmus_magnuspinnatus
ENSGAGG00000020025RBFOX39575.652ENSPEMG00000010500Rbfox39677.159Peromyscus_maniculatus_bairdii
ENSGAGG00000020025RBFOX35576.471ENSPMAG00000008689rbfox3b9977.451Petromyzon_marinus
ENSGAGG00000020025RBFOX39680.941ENSPCIG00000005766RBFOX39589.057Phascolarctos_cinereus
ENSGAGG00000020025RBFOX310083.706ENSPFOG00000018294rbfox3b9878.552Poecilia_formosa
ENSGAGG00000020025RBFOX37781.481ENSPLAG00000000481rbfox3b7982.490Poecilia_latipinna
ENSGAGG00000020025RBFOX310073.802ENSPMEG00000022997rbfox3b9581.648Poecilia_mexicana
ENSGAGG00000020025RBFOX310084.345ENSPREG00000012886rbfox3b9883.889Poecilia_reticulata
ENSGAGG00000020025RBFOX39878.806ENSPPYG00000008704RBFOX310078.635Pongo_abelii
ENSGAGG00000020025RBFOX39574.709ENSPCAG00000001401RBFOX39675.581Procavia_capensis
ENSGAGG00000020025RBFOX310076.323ENSPCOG00000012689RBFOX39776.163Propithecus_coquereli
ENSGAGG00000020025RBFOX39568.116ENSPVAG00000015243RBFOX39668.696Pteropus_vampyrus
ENSGAGG00000020025RBFOX310075.000ENSPNYG00000009079-9475.556Pundamilia_nyererei
ENSGAGG00000020025RBFOX310071.885ENSPNYG00000010414rbfox3b9772.778Pundamilia_nyererei
ENSGAGG00000020025RBFOX310080.159ENSPNAG00000002889rbfox3a9880.952Pygocentrus_nattereri
ENSGAGG00000020025RBFOX310064.839ENSPNAG00000018173rbfox3b8571.970Pygocentrus_nattereri
ENSGAGG00000020025RBFOX39587.960ENSRNOG00000003386Rbfox39588.629Rattus_norvegicus
ENSGAGG00000020025RBFOX39689.106ENSRBIG00000040449RBFOX310089.106Rhinopithecus_bieti
ENSGAGG00000020025RBFOX39588.889ENSRROG00000000766RBFOX39588.889Rhinopithecus_roxellana
ENSGAGG00000020025RBFOX39587.542ENSSBOG00000031591RBFOX39587.542Saimiri_boliviensis_boliviensis
ENSGAGG00000020025RBFOX39582.927ENSSHAG00000016076RBFOX39589.057Sarcophilus_harrisii
ENSGAGG00000020025RBFOX39471.827ENSSFOG00015004716RBFOX310069.748Scleropages_formosus
ENSGAGG00000020025RBFOX39885.000ENSSFOG00015023260rbfox3a9983.502Scleropages_formosus
ENSGAGG00000020025RBFOX310079.635ENSSMAG00000012618rbfox3b7879.420Scophthalmus_maximus
ENSGAGG00000020025RBFOX310081.270ENSSMAG00000019052-9881.111Scophthalmus_maximus
ENSGAGG00000020025RBFOX39876.437ENSSDUG00000015801-9676.945Seriola_dumerili
ENSGAGG00000020025RBFOX310073.802ENSSDUG00000023183rbfox3b9581.648Seriola_dumerili
ENSGAGG00000020025RBFOX310083.706ENSSLDG00000000149rbfox3b9884.034Seriola_lalandi_dorsalis
ENSGAGG00000020025RBFOX39778.846ENSSLDG00000016098-9778.453Seriola_lalandi_dorsalis
ENSGAGG00000020025RBFOX39594.276ENSSPUG00000011733RBFOX39594.276Sphenodon_punctatus
ENSGAGG00000020025RBFOX310074.441ENSSPAG00000017571rbfox3b9775.833Stegastes_partitus
ENSGAGG00000020025RBFOX39176.389ENSSPAG00000004898-7675.194Stegastes_partitus
ENSGAGG00000020025RBFOX38688.104ENSSSCG00000039498RBFOX310076.667Sus_scrofa
ENSGAGG00000020025RBFOX310078.882ENSTRUG00000004894rbfox3b10077.095Takifugu_rubripes
ENSGAGG00000020025RBFOX310075.362ENSTNIG00000011278rbfox3b10071.072Tetraodon_nigroviridis
ENSGAGG00000020025RBFOX39150.562ENSTBEG00000004296-9648.315Tupaia_belangeri
ENSGAGG00000020025RBFOX39570.058ENSTTRG00000003676RBFOX39670.058Tursiops_truncatus
ENSGAGG00000020025RBFOX39587.879ENSUAMG00000004668RBFOX39587.879Ursus_americanus
ENSGAGG00000020025RBFOX39889.911ENSVVUG00000017864RBFOX39588.889Vulpes_vulpes
ENSGAGG00000020025RBFOX310069.552ENSXETG00000020236rbfox39866.408Xenopus_tropicalis
ENSGAGG00000020025RBFOX310082.166ENSXCOG00000018262rbfox3b9976.389Xiphophorus_couchianus
ENSGAGG00000020025RBFOX310083.706ENSXMAG00000012939rbfox3b9884.636Xiphophorus_maculatus

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