EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000020051 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 62527 bases
Position: chrPPEB01002729.1:67519-130045
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000027593	RRM_1	PF00076.22	8.9e-40	1	3
ENSGAGP00000027593	RRM_1	PF00076.22	8.9e-40	2	3
ENSGAGP00000027593	RRM_1	PF00076.22	8.9e-40	3	3
ENSGAGP00000027596	RRM_1	PF00076.22	8.9e-40	1	3
ENSGAGP00000027596	RRM_1	PF00076.22	8.9e-40	2	3
ENSGAGP00000027596	RRM_1	PF00076.22	8.9e-40	3	3
ENSGAGP00000027598	RRM_1	PF00076.22	8.9e-40	1	3
ENSGAGP00000027598	RRM_1	PF00076.22	8.9e-40	2	3
ENSGAGP00000027598	RRM_1	PF00076.22	8.9e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000031350	RBM47-202	3059	-	ENSGAGP00000027596	596 (aa)	-	-
ENSGAGT00000031352	RBM47-203	3015	-	ENSGAGP00000027598	596 (aa)	-	-
ENSGAGT00000031347	RBM47-201	3064	-	ENSGAGP00000027593	596 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000020051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020051's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000020051	RBM47	54	55.280	ENSGAGG00000005439	HNRNPR	70	46.593
ENSGAGG00000020051	RBM47	52	54.516	ENSGAGG00000013482	SYNCRIP	80	46.035
ENSGAGG00000020051	RBM47	53	71.609	ENSGAGG00000002019	RBM46	60	71.609
ENSGAGG00000020051	RBM47	67	59.102	ENSGAGG00000016508	A1CF	72	59.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000020051	RBM47	100	89.667	ENSG00000163694	RBM47	100	93.088	Homo_sapiens
ENSGAGG00000020051	RBM47	100	79.104	ENSAPOG00000011062	rbm47	100	82.908	Acanthochromis_polyacanthus
ENSGAGG00000020051	RBM47	100	89.037	ENSAMEG00000009672	RBM47	100	89.203	Ailuropoda_melanoleuca
ENSGAGG00000020051	RBM47	100	79.000	ENSACIG00000011531	rbm47	100	79.000	Amphilophus_citrinellus
ENSGAGG00000020051	RBM47	100	79.833	ENSAOCG00000022245	rbm47	100	82.908	Amphiprion_ocellaris
ENSGAGG00000020051	RBM47	100	79.833	ENSAPEG00000018304	rbm47	100	82.908	Amphiprion_percula
ENSGAGG00000020051	RBM47	100	79.282	ENSATEG00000018400	rbm47	100	78.431	Anabas_testudineus
ENSGAGG00000020051	RBM47	100	92.140	ENSAPLG00000013974	RBM47	100	91.304	Anas_platyrhynchos
ENSGAGG00000020051	RBM47	100	90.183	ENSACAG00000011833	RBM47	100	90.349	Anolis_carolinensis
ENSGAGG00000020051	RBM47	100	90.167	ENSANAG00000029440	RBM47	100	90.333	Aotus_nancymaae
ENSGAGG00000020051	RBM47	100	77.977	ENSACLG00000016902	rbm47	100	84.536	Astatotilapia_calliptera
ENSGAGG00000020051	RBM47	96	80.551	ENSAMXG00000021794	rbm47	100	77.524	Astyanax_mexicanus
ENSGAGG00000020051	RBM47	100	91.275	ENSBTAG00000002356	RBM47	100	91.611	Bos_taurus
ENSGAGG00000020051	RBM47	100	90.101	ENSCJAG00000019385	RBM47	100	90.436	Callithrix_jacchus
ENSGAGG00000020051	RBM47	96	89.043	ENSCAFG00000015898	RBM47	100	87.813	Canis_familiaris
ENSGAGG00000020051	RBM47	82	91.446	ENSCAFG00020010558	RBM47	94	89.153	Canis_lupus_dingo
ENSGAGG00000020051	RBM47	100	91.275	ENSCHIG00000026214	RBM47	100	91.611	Capra_hircus
ENSGAGG00000020051	RBM47	86	88.496	ENSTSYG00000033612	RBM47	93	88.496	Carlito_syrichta
ENSGAGG00000020051	RBM47	100	82.747	ENSCAPG00000008426	RBM47	100	82.747	Cavia_aperea
ENSGAGG00000020051	RBM47	100	88.777	ENSCPOG00000014100	RBM47	100	91.755	Cavia_porcellus
ENSGAGG00000020051	RBM47	100	90.436	ENSCCAG00000030129	-	100	90.772	Cebus_capucinus
ENSGAGG00000020051	RBM47	99	62.104	ENSCCAG00000024397	-	99	61.770	Cebus_capucinus
ENSGAGG00000020051	RBM47	100	90.101	ENSCATG00000042064	RBM47	100	90.436	Cercocebus_atys
ENSGAGG00000020051	RBM47	100	89.430	ENSCLAG00000001684	RBM47	100	91.223	Chinchilla_lanigera
ENSGAGG00000020051	RBM47	100	89.667	ENSCSAG00000017060	RBM47	100	90.167	Chlorocebus_sabaeus
ENSGAGG00000020051	RBM47	89	85.874	ENSCHOG00000011731	RBM47	88	86.771	Choloepus_hoffmanni
ENSGAGG00000020051	RBM47	100	99.664	ENSCPBG00000013831	RBM47	100	99.664	Chrysemys_picta_bellii
ENSGAGG00000020051	RBM47	100	90.436	ENSCANG00000019997	RBM47	100	90.436	Colobus_angolensis_palliatus
ENSGAGG00000020051	RBM47	89	86.508	ENSCGRG00001020102	-	100	86.508	Cricetulus_griseus_chok1gshd
ENSGAGG00000020051	RBM47	100	88.186	ENSCGRG00001000623	-	100	87.354	Cricetulus_griseus_chok1gshd
ENSGAGG00000020051	RBM47	100	87.354	ENSCGRG00000007762	-	100	88.608	Cricetulus_griseus_crigri
ENSGAGG00000020051	RBM47	89	86.243	ENSCGRG00000014760	-	100	86.243	Cricetulus_griseus_crigri
ENSGAGG00000020051	RBM47	100	76.333	ENSCSEG00000004545	rbm47	100	77.076	Cynoglossus_semilaevis
ENSGAGG00000020051	RBM47	100	77.759	ENSCVAG00000020144	rbm47	100	83.418	Cyprinodon_variegatus
ENSGAGG00000020051	RBM47	96	80.969	ENSDARG00000061985	rbm47	100	78.723	Danio_rerio
ENSGAGG00000020051	RBM47	100	88.926	ENSDNOG00000046854	RBM47	100	89.765	Dasypus_novemcinctus
ENSGAGG00000020051	RBM47	100	89.701	ENSDORG00000010144	Rbm47	100	89.701	Dipodomys_ordii
ENSGAGG00000020051	RBM47	97	90.753	ENSETEG00000009194	RBM47	100	90.000	Echinops_telfairi
ENSGAGG00000020051	RBM47	99	58.444	ENSEBUG00000011912	rbm47	99	58.940	Eptatretus_burgeri
ENSGAGG00000020051	RBM47	100	90.940	ENSEASG00005008443	RBM47	100	91.275	Equus_asinus_asinus
ENSGAGG00000020051	RBM47	100	90.940	ENSECAG00000004400	RBM47	100	91.275	Equus_caballus
ENSGAGG00000020051	RBM47	75	90.909	ENSEEUG00000001194	RBM47	75	90.909	Erinaceus_europaeus
ENSGAGG00000020051	RBM47	100	74.516	ENSELUG00000006148	rbm47	100	82.368	Esox_lucius
ENSGAGG00000020051	RBM47	100	90.772	ENSFCAG00000012399	RBM47	100	90.604	Felis_catus
ENSGAGG00000020051	RBM47	100	94.147	ENSFALG00000002861	RBM47	100	94.314	Ficedula_albicollis
ENSGAGG00000020051	RBM47	100	88.107	ENSFDAG00000016326	RBM47	100	89.096	Fukomys_damarensis
ENSGAGG00000020051	RBM47	100	79.299	ENSFHEG00000007938	rbm47	100	78.261	Fundulus_heteroclitus
ENSGAGG00000020051	RBM47	100	75.000	ENSGMOG00000014802	rbm47	100	75.000	Gadus_morhua
ENSGAGG00000020051	RBM47	63	96.543	ENSGALG00000014267	RBM47	99	96.543	Gallus_gallus
ENSGAGG00000020051	RBM47	63	85.638	ENSGAFG00000020571	rbm47	98	85.638	Gambusia_affinis
ENSGAGG00000020051	RBM47	100	75.081	ENSGACG00000016223	rbm47	100	80.102	Gasterosteus_aculeatus
ENSGAGG00000020051	RBM47	100	90.101	ENSGGOG00000001367	RBM47	100	90.436	Gorilla_gorilla
ENSGAGG00000020051	RBM47	100	77.561	ENSHBUG00000003520	rbm47	100	84.536	Haplochromis_burtoni
ENSGAGG00000020051	RBM47	85	78.906	ENSHGLG00000016914	RBM47	100	89.241	Heterocephalus_glaber_female
ENSGAGG00000020051	RBM47	100	88.591	ENSHGLG00100014028	-	100	90.426	Heterocephalus_glaber_male
ENSGAGG00000020051	RBM47	100	79.866	ENSHGLG00100003071	-	100	79.698	Heterocephalus_glaber_male
ENSGAGG00000020051	RBM47	99	78.261	ENSHCOG00000002074	rbm47	99	82.653	Hippocampus_comes
ENSGAGG00000020051	RBM47	100	79.700	ENSIPUG00000004743	rbm47	100	79.967	Ictalurus_punctatus
ENSGAGG00000020051	RBM47	100	89.167	ENSSTOG00000004727	RBM47	100	89.000	Ictidomys_tridecemlineatus
ENSGAGG00000020051	RBM47	100	88.040	ENSJJAG00000013823	Rbm47	100	88.372	Jaculus_jaculus
ENSGAGG00000020051	RBM47	100	79.167	ENSKMAG00000000084	rbm47	100	82.398	Kryptolebias_marmoratus
ENSGAGG00000020051	RBM47	100	78.702	ENSLBEG00000008436	rbm47	100	81.633	Labrus_bergylta
ENSGAGG00000020051	RBM47	100	88.255	ENSLACG00000007196	RBM47	100	88.423	Latimeria_chalumnae
ENSGAGG00000020051	RBM47	100	85.762	ENSLOCG00000012966	rbm47	95	85.930	Lepisosteus_oculatus
ENSGAGG00000020051	RBM47	100	89.983	ENSLAFG00000011998	RBM47	100	89.816	Loxodonta_africana
ENSGAGG00000020051	RBM47	100	90.101	ENSMFAG00000037967	RBM47	100	90.436	Macaca_fascicularis
ENSGAGG00000020051	RBM47	100	89.667	ENSMMUG00000012036	RBM47	100	92.228	Macaca_mulatta
ENSGAGG00000020051	RBM47	100	90.101	ENSMNEG00000040774	RBM47	100	90.436	Macaca_nemestrina
ENSGAGG00000020051	RBM47	100	94.921	ENSMLEG00000041432	RBM47	100	94.921	Mandrillus_leucophaeus
ENSGAGG00000020051	RBM47	100	78.105	ENSMAMG00000019143	rbm47	99	83.548	Mastacembelus_armatus
ENSGAGG00000020051	RBM47	100	77.977	ENSMZEG00005023659	rbm47	99	84.536	Maylandia_zebra
ENSGAGG00000020051	RBM47	100	95.485	ENSMGAG00000012226	RBM47	100	95.151	Meleagris_gallopavo
ENSGAGG00000020051	RBM47	100	88.333	ENSMAUG00000006493	Rbm47	100	89.241	Mesocricetus_auratus
ENSGAGG00000020051	RBM47	100	84.060	ENSMICG00000026417	RBM47	100	85.904	Microcebus_murinus
ENSGAGG00000020051	RBM47	100	88.481	ENSMOCG00000021170	Rbm47	100	88.648	Microtus_ochrogaster
ENSGAGG00000020051	RBM47	100	78.595	ENSMMOG00000007260	rbm47	100	77.741	Mola_mola
ENSGAGG00000020051	RBM47	100	92.154	ENSMODG00000007003	RBM47	100	91.987	Monodelphis_domestica
ENSGAGG00000020051	RBM47	100	82.215	ENSMODG00000020561	-	100	82.215	Monodelphis_domestica
ENSGAGG00000020051	RBM47	51	84.566	ENSMODG00000015426	-	98	83.228	Monodelphis_domestica
ENSGAGG00000020051	RBM47	100	77.870	ENSMALG00000005167	rbm47	100	82.564	Monopterus_albus
ENSGAGG00000020051	RBM47	100	88.629	MGP_CAROLIEiJ_G0027258	Rbm47	100	91.223	Mus_caroli
ENSGAGG00000020051	RBM47	100	88.629	ENSMUSG00000070780	Rbm47	100	91.489	Mus_musculus
ENSGAGG00000020051	RBM47	100	88.294	MGP_PahariEiJ_G0017040	Rbm47	100	90.957	Mus_pahari
ENSGAGG00000020051	RBM47	100	88.926	MGP_SPRETEiJ_G0028253	Rbm47	100	91.489	Mus_spretus
ENSGAGG00000020051	RBM47	100	89.816	ENSMPUG00000006177	RBM47	94	89.983	Mustela_putorius_furo
ENSGAGG00000020051	RBM47	100	89.782	ENSMLUG00000000889	RBM47	100	90.285	Myotis_lucifugus
ENSGAGG00000020051	RBM47	100	88.167	ENSNGAG00000003325	Rbm47	100	88.500	Nannospalax_galili
ENSGAGG00000020051	RBM47	100	77.850	ENSNBRG00000015092	rbm47	100	77.850	Neolamprologus_brichardi
ENSGAGG00000020051	RBM47	100	90.101	ENSNLEG00000017151	RBM47	100	90.436	Nomascus_leucogenys
ENSGAGG00000020051	RBM47	72	89.327	ENSMEUG00000009516	-	100	89.327	Notamacropus_eugenii
ENSGAGG00000020051	RBM47	76	93.802	ENSOPRG00000016507	-	75	93.802	Ochotona_princeps
ENSGAGG00000020051	RBM47	100	89.262	ENSODEG00000004873	RBM47	100	89.430	Octodon_degus
ENSGAGG00000020051	RBM47	100	78.176	ENSONIG00000009061	rbm47	100	77.488	Oreochromis_niloticus
ENSGAGG00000020051	RBM47	100	87.375	ENSOANG00000008978	RBM47	100	89.037	Ornithorhynchus_anatinus
ENSGAGG00000020051	RBM47	100	90.117	ENSOCUG00000012034	RBM47	100	90.452	Oryctolagus_cuniculus
ENSGAGG00000020051	RBM47	100	78.094	ENSORLG00000005847	rbm47	100	83.033	Oryzias_latipes
ENSGAGG00000020051	RBM47	100	78.261	ENSORLG00020005154	rbm47	100	83.033	Oryzias_latipes_hni
ENSGAGG00000020051	RBM47	100	78.261	ENSORLG00015000066	rbm47	100	82.776	Oryzias_latipes_hsok
ENSGAGG00000020051	RBM47	100	79.299	ENSOMEG00000010730	rbm47	100	78.428	Oryzias_melastigma
ENSGAGG00000020051	RBM47	100	89.482	ENSOGAG00000029367	-	100	89.816	Otolemur_garnettii
ENSGAGG00000020051	RBM47	100	81.879	ENSOGAG00000025193	-	100	82.383	Otolemur_garnettii
ENSGAGG00000020051	RBM47	100	82.718	ENSOARG00000012711	RBM47	100	83.221	Ovis_aries
ENSGAGG00000020051	RBM47	100	89.933	ENSPPAG00000029763	RBM47	100	90.268	Pan_paniscus
ENSGAGG00000020051	RBM47	100	87.416	ENSPPRG00000012873	RBM47	99	92.553	Panthera_pardus
ENSGAGG00000020051	RBM47	85	87.771	ENSPTIG00000017046	RBM47	100	87.968	Panthera_tigris_altaica
ENSGAGG00000020051	RBM47	100	90.101	ENSPTRG00000016006	RBM47	100	90.436	Pan_troglodytes
ENSGAGG00000020051	RBM47	100	90.101	ENSPANG00000005980	RBM47	100	90.436	Papio_anubis
ENSGAGG00000020051	RBM47	96	77.682	ENSPKIG00000005037	rbm47	100	75.658	Paramormyrops_kingsleyae
ENSGAGG00000020051	RBM47	96	76.552	ENSPKIG00000013431	RBM47	98	83.721	Paramormyrops_kingsleyae
ENSGAGG00000020051	RBM47	89	98.106	ENSPSIG00000017516	RBM47	97	98.106	Pelodiscus_sinensis
ENSGAGG00000020051	RBM47	100	76.756	ENSPMGG00000018540	rbm47	100	77.333	Periophthalmus_magnuspinnatus
ENSGAGG00000020051	RBM47	100	88.000	ENSPEMG00000011088	Rbm47	100	88.167	Peromyscus_maniculatus_bairdii
ENSGAGG00000020051	RBM47	96	81.928	ENSPFOG00000007997	rbm47	100	77.958	Poecilia_formosa
ENSGAGG00000020051	RBM47	96	81.897	ENSPLAG00000002072	rbm47	100	85.372	Poecilia_latipinna
ENSGAGG00000020051	RBM47	100	80.565	ENSPMEG00000017492	rbm47	100	82.908	Poecilia_mexicana
ENSGAGG00000020051	RBM47	96	81.552	ENSPREG00000008456	rbm47	100	85.372	Poecilia_reticulata
ENSGAGG00000020051	RBM47	98	78.020	ENSPPYG00000014688	RBM47	100	77.852	Pongo_abelii
ENSGAGG00000020051	RBM47	81	92.519	ENSPCAG00000011879	RBM47	81	92.768	Procavia_capensis
ENSGAGG00000020051	RBM47	100	85.738	ENSPCOG00000023451	RBM47	100	87.766	Propithecus_coquereli
ENSGAGG00000020051	RBM47	100	89.649	ENSPVAG00000003812	RBM47	100	90.317	Pteropus_vampyrus
ENSGAGG00000020051	RBM47	100	77.597	ENSPNYG00000022868	rbm47	100	77.273	Pundamilia_nyererei
ENSGAGG00000020051	RBM47	100	76.998	ENSPNAG00000007940	rbm47	100	77.814	Pygocentrus_nattereri
ENSGAGG00000020051	RBM47	100	88.629	ENSRNOG00000002408	Rbm47	100	88.629	Rattus_norvegicus
ENSGAGG00000020051	RBM47	100	90.436	ENSRBIG00000039601	RBM47	100	90.436	Rhinopithecus_bieti
ENSGAGG00000020051	RBM47	100	90.436	ENSRROG00000044696	RBM47	100	90.436	Rhinopithecus_roxellana
ENSGAGG00000020051	RBM47	100	87.416	ENSSBOG00000028475	RBM47	100	92.990	Saimiri_boliviensis_boliviensis
ENSGAGG00000020051	RBM47	100	92.630	ENSSHAG00000017576	RBM47	100	92.965	Sarcophilus_harrisii
ENSGAGG00000020051	RBM47	100	75.712	ENSSFOG00015024101	RBM47	100	75.874	Scleropages_formosus
ENSGAGG00000020051	RBM47	100	74.877	ENSSFOG00015012445	rbm47	100	74.836	Scleropages_formosus
ENSGAGG00000020051	RBM47	100	76.672	ENSSMAG00000009744	rbm47	100	82.051	Scophthalmus_maximus
ENSGAGG00000020051	RBM47	100	79.967	ENSSDUG00000022684	rbm47	100	79.264	Seriola_dumerili
ENSGAGG00000020051	RBM47	100	80.801	ENSSLDG00000003109	rbm47	100	82.576	Seriola_lalandi_dorsalis
ENSGAGG00000020051	RBM47	85	91.723	ENSSARG00000001735	RBM47	75	91.723	Sorex_araneus
ENSGAGG00000020051	RBM47	100	94.631	ENSSPUG00000007515	RBM47	100	96.011	Sphenodon_punctatus
ENSGAGG00000020051	RBM47	100	80.699	ENSSPAG00000001257	rbm47	100	83.418	Stegastes_partitus
ENSGAGG00000020051	RBM47	100	91.443	ENSSSCG00000008796	RBM47	100	91.275	Sus_scrofa
ENSGAGG00000020051	RBM47	100	94.305	ENSTGUG00000008705	RBM47	100	94.640	Taeniopygia_guttata
ENSGAGG00000020051	RBM47	100	78.130	ENSTRUG00000014050	rbm47	100	77.592	Takifugu_rubripes
ENSGAGG00000020051	RBM47	100	76.923	ENSTNIG00000006127	rbm47	100	76.923	Tetraodon_nigroviridis
ENSGAGG00000020051	RBM47	77	85.638	ENSTBEG00000001607	RBM47	76	86.170	Tupaia_belangeri
ENSGAGG00000020051	RBM47	100	90.772	ENSTTRG00000002839	RBM47	100	90.772	Tursiops_truncatus
ENSGAGG00000020051	RBM47	100	90.150	ENSUAMG00000021346	RBM47	100	89.649	Ursus_americanus
ENSGAGG00000020051	RBM47	57	89.726	ENSVPAG00000000641	-	57	89.726	Vicugna_pacos
ENSGAGG00000020051	RBM47	96	90.070	ENSVVUG00000014774	RBM47	100	88.796	Vulpes_vulpes
ENSGAGG00000020051	RBM47	100	87.479	ENSXETG00000012802	rbm47	100	87.646	Xenopus_tropicalis
ENSGAGG00000020051	RBM47	88	85.372	ENSXCOG00000000780	rbm47	100	85.372	Xiphophorus_couchianus
ENSGAGG00000020051	RBM47	100	79.466	ENSXMAG00000009874	rbm47	100	82.653	Xiphophorus_maculatus