EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000020134 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 8200 bases
Position: chrPPEB01004414.1:88432-96631
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000027704	zf-C2H2	PF00096.26	4.3e-65	1	10
ENSGAGP00000027704	zf-C2H2	PF00096.26	4.3e-65	2	10
ENSGAGP00000027704	zf-C2H2	PF00096.26	4.3e-65	3	10
ENSGAGP00000027704	zf-C2H2	PF00096.26	4.3e-65	4	10
ENSGAGP00000027704	zf-C2H2	PF00096.26	4.3e-65	5	10
ENSGAGP00000027704	zf-C2H2	PF00096.26	4.3e-65	6	10
ENSGAGP00000027704	zf-C2H2	PF00096.26	4.3e-65	7	10
ENSGAGP00000027704	zf-C2H2	PF00096.26	4.3e-65	8	10
ENSGAGP00000027704	zf-C2H2	PF00096.26	4.3e-65	9	10
ENSGAGP00000027704	zf-C2H2	PF00096.26	4.3e-65	10	10
ENSGAGP00000027704	zf-met	PF12874.7	9.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000031472	-	1974	-	ENSGAGP00000027704	657 (aa)	-	-
ENSGAGT00000031469	-	342	-	ENSGAGP00000027701	113 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000020134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000020134	-	70	49.180	ENSGAGG00000011366	-	93	49.180
ENSGAGG00000020134	-	62	57.071	ENSGAGG00000006846	-	94	48.366
ENSGAGG00000020134	-	65	56.383	ENSGAGG00000006848	-	60	56.085
ENSGAGG00000020134	-	95	67.893	ENSGAGG00000011487	-	97	78.873
ENSGAGG00000020134	-	66	62.712	ENSGAGG00000016529	-	94	62.712
ENSGAGG00000020134	-	63	34.052	ENSGAGG00000003095	ZNF865	80	34.169
ENSGAGG00000020134	-	67	49.756	ENSGAGG00000005331	-	80	49.756
ENSGAGG00000020134	-	67	63.784	ENSGAGG00000004740	-	91	63.784
ENSGAGG00000020134	-	63	43.791	ENSGAGG00000017094	-	52	43.791
ENSGAGG00000020134	-	64	72.189	ENSGAGG00000010492	-	79	72.189
ENSGAGG00000020134	-	66	57.196	ENSGAGG00000018445	-	100	57.196
ENSGAGG00000020134	-	74	54.839	ENSGAGG00000001387	-	68	54.839
ENSGAGG00000020134	-	70	63.190	ENSGAGG00000006683	-	89	66.467
ENSGAGG00000020134	-	73	90.244	ENSGAGG00000014356	-	86	90.244
ENSGAGG00000020134	-	77	64.548	ENSGAGG00000002828	-	99	64.548
ENSGAGG00000020134	-	64	53.719	ENSGAGG00000011399	-	91	53.719
ENSGAGG00000020134	-	69	63.350	ENSGAGG00000014389	-	96	63.350
ENSGAGG00000020134	-	71	58.503	ENSGAGG00000015451	-	99	58.503
ENSGAGG00000020134	-	75	89.189	ENSGAGG00000010833	-	94	89.189
ENSGAGG00000020134	-	65	62.030	ENSGAGG00000011574	-	79	62.030
ENSGAGG00000020134	-	65	33.962	ENSGAGG00000020362	PRDM5	76	33.962
ENSGAGG00000020134	-	66	65.854	ENSGAGG00000005805	-	99	65.854
ENSGAGG00000020134	-	72	60.776	ENSGAGG00000006323	-	91	66.391
ENSGAGG00000020134	-	77	85.000	ENSGAGG00000009272	-	96	85.000
ENSGAGG00000020134	-	73	85.714	ENSGAGG00000006960	-	86	85.714
ENSGAGG00000020134	-	97	61.468	ENSGAGG00000002179	-	99	61.610
ENSGAGG00000020134	-	65	63.246	ENSGAGG00000001469	-	92	63.747
ENSGAGG00000020134	-	64	62.258	ENSGAGG00000013851	-	86	62.258
ENSGAGG00000020134	-	62	66.929	ENSGAGG00000009739	-	100	66.929
ENSGAGG00000020134	-	67	50.000	ENSGAGG00000004926	-	97	50.000
ENSGAGG00000020134	-	66	62.000	ENSGAGG00000017986	-	94	62.000
ENSGAGG00000020134	-	97	71.626	ENSGAGG00000010324	-	95	85.714
ENSGAGG00000020134	-	63	47.619	ENSGAGG00000013021	-	96	47.619
ENSGAGG00000020134	-	63	51.866	ENSGAGG00000020168	-	70	51.866
ENSGAGG00000020134	-	66	63.694	ENSGAGG00000015232	-	68	63.694
ENSGAGG00000020134	-	66	61.168	ENSGAGG00000007230	-	92	60.208
ENSGAGG00000020134	-	96	61.905	ENSGAGG00000001645	-	92	57.419
ENSGAGG00000020134	-	67	64.368	ENSGAGG00000000971	-	96	64.368
ENSGAGG00000020134	-	64	52.893	ENSGAGG00000018885	-	66	52.893
ENSGAGG00000020134	-	66	39.286	ENSGAGG00000003883	ZNF236	60	39.286
ENSGAGG00000020134	-	72	66.667	ENSGAGG00000019349	-	87	66.667
ENSGAGG00000020134	-	68	64.655	ENSGAGG00000012452	-	87	64.655
ENSGAGG00000020134	-	70	61.379	ENSGAGG00000017640	-	98	61.151
ENSGAGG00000020134	-	63	38.653	ENSGAGG00000022571	ZNF319	88	38.653
ENSGAGG00000020134	-	96	60.976	ENSGAGG00000008773	-	93	61.442
ENSGAGG00000020134	-	74	86.047	ENSGAGG00000020594	-	84	86.047
ENSGAGG00000020134	-	98	60.680	ENSGAGG00000002214	-	99	60.938

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000020134	-	65	56.459	ENSAMXG00000029161	-	80	56.459	Astyanax_mexicanus
ENSGAGG00000020134	-	97	59.233	ENSCPBG00000021479	-	86	63.309	Chrysemys_picta_bellii
ENSGAGG00000020134	-	72	90.698	ENSCPBG00000016841	-	97	88.571	Chrysemys_picta_bellii
ENSGAGG00000020134	-	89	58.019	ENSCPBG00000001421	-	98	65.057	Chrysemys_picta_bellii
ENSGAGG00000020134	-	74	88.095	ENSCPBG00000004030	-	93	88.095	Chrysemys_picta_bellii
ENSGAGG00000020134	-	69	80.952	ENSCPBG00000021487	-	82	80.952	Chrysemys_picta_bellii
ENSGAGG00000020134	-	71	92.857	ENSCPBG00000012976	-	82	92.857	Chrysemys_picta_bellii
ENSGAGG00000020134	-	95	65.033	ENSCPBG00000001272	-	98	64.164	Chrysemys_picta_bellii
ENSGAGG00000020134	-	97	60.645	ENSCPBG00000004990	-	100	63.669	Chrysemys_picta_bellii
ENSGAGG00000020134	-	72	67.273	ENSPSIG00000015465	-	86	67.273	Pelodiscus_sinensis
ENSGAGG00000020134	-	95	49.692	ENSPSIG00000012865	-	98	49.692	Pelodiscus_sinensis
ENSGAGG00000020134	-	96	64.257	ENSPSIG00000009893	-	99	62.214	Pelodiscus_sinensis
ENSGAGG00000020134	-	56	63.948	ENSPSIG00000015216	-	80	63.948	Pelodiscus_sinensis
ENSGAGG00000020134	-	60	61.597	ENSPSIG00000002569	-	87	61.597	Pelodiscus_sinensis
ENSGAGG00000020134	-	64	55.874	ENSPSIG00000001026	-	90	55.874	Pelodiscus_sinensis
ENSGAGG00000020134	-	63	55.941	ENSPSIG00000000522	-	91	53.586	Pelodiscus_sinensis
ENSGAGG00000020134	-	65	61.333	ENSTGUG00000018327	-	100	61.333	Taeniopygia_guttata
ENSGAGG00000020134	-	62	52.381	ENSTGUG00000015260	-	100	52.381	Taeniopygia_guttata
ENSGAGG00000020134	-	65	55.602	ENSTGUG00000016516	-	99	55.602	Taeniopygia_guttata
ENSGAGG00000020134	-	61	54.275	ENSTGUG00000016781	-	99	54.275	Taeniopygia_guttata
ENSGAGG00000020134	-	63	55.000	ENSTGUG00000014614	-	98	55.000	Taeniopygia_guttata
ENSGAGG00000020134	-	68	57.500	ENSTGUG00000013736	-	99	57.500	Taeniopygia_guttata
ENSGAGG00000020134	-	61	56.349	ENSTGUG00000018518	-	100	56.349	Taeniopygia_guttata
ENSGAGG00000020134	-	61	59.259	ENSTGUG00000018349	-	100	59.259	Taeniopygia_guttata
ENSGAGG00000020134	-	66	56.122	ENSTGUG00000018445	-	99	56.122	Taeniopygia_guttata
ENSGAGG00000020134	-	64	57.962	ENSTGUG00000018374	-	99	57.962	Taeniopygia_guttata
ENSGAGG00000020134	-	61	58.333	ENSTGUG00000018542	-	99	58.333	Taeniopygia_guttata
ENSGAGG00000020134	-	61	55.399	ENSTGUG00000014888	-	98	55.399	Taeniopygia_guttata
ENSGAGG00000020134	-	71	55.078	ENSTGUG00000016850	-	99	55.078	Taeniopygia_guttata