EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000020168 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 7970 bases
Position: chrPPEB01004420.1:49341-57310
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	1	11
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	2	11
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	3	11
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	4	11
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	5	11
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	6	11
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	7	11
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	8	11
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	9	11
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	10	11
ENSGAGP00000027747	zf-C2H2	PF00096.26	5.6e-71	11	11
ENSGAGP00000027747	zf-met	PF12874.7	1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000031520	-	1536	-	ENSGAGP00000027747	511 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000020168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000020168	-	70	30.603	ENSGAGG00000022082	PRDM15	50	34.188
ENSGAGG00000020168	-	73	60.843	ENSGAGG00000010492	-	75	60.843
ENSGAGG00000020168	-	76	52.525	ENSGAGG00000006848	-	53	56.627
ENSGAGG00000020168	-	76	43.023	ENSGAGG00000003883	ZNF236	60	42.857
ENSGAGG00000020168	-	78	51.748	ENSGAGG00000007230	-	83	51.748
ENSGAGG00000020168	-	77	50.000	ENSGAGG00000006846	-	87	50.000
ENSGAGG00000020168	-	74	47.619	ENSGAGG00000018885	-	73	47.619
ENSGAGG00000020168	-	70	57.709	ENSGAGG00000005805	-	83	57.709
ENSGAGG00000020168	-	71	55.556	ENSGAGG00000021327	GFI1B	52	55.556
ENSGAGG00000020168	-	76	58.246	ENSGAGG00000002214	-	84	58.246
ENSGAGG00000020168	-	83	57.651	ENSGAGG00000001469	-	94	57.651
ENSGAGG00000020168	-	74	56.944	ENSGAGG00000005331	-	80	56.944
ENSGAGG00000020168	-	71	45.196	ENSGAGG00000017094	-	54	45.196
ENSGAGG00000020168	-	73	54.513	ENSGAGG00000013851	-	75	54.513
ENSGAGG00000020168	-	70	51.866	ENSGAGG00000020134	-	63	51.866
ENSGAGG00000020168	-	71	42.105	ENSGAGG00000017640	-	60	53.000
ENSGAGG00000020168	-	72	34.081	ENSGAGG00000020362	PRDM5	72	35.971
ENSGAGG00000020168	-	74	51.370	ENSGAGG00000015451	-	84	51.370
ENSGAGG00000020168	-	70	57.831	ENSGAGG00000016529	-	83	57.831
ENSGAGG00000020168	-	72	41.036	ENSGAGG00000003095	ZNF865	80	41.036
ENSGAGG00000020168	-	71	54.717	ENSGAGG00000006960	-	78	51.557
ENSGAGG00000020168	-	70	54.435	ENSGAGG00000009739	-	99	54.435
ENSGAGG00000020168	-	84	54.737	ENSGAGG00000002179	-	98	54.737
ENSGAGG00000020168	-	69	45.349	ENSGAGG00000004926	-	90	45.349
ENSGAGG00000020168	-	80	53.636	ENSGAGG00000006323	-	92	53.636
ENSGAGG00000020168	-	77	48.372	ENSGAGG00000015200	MYNN	50	45.506
ENSGAGG00000020168	-	76	59.091	ENSGAGG00000004740	-	90	59.091
ENSGAGG00000020168	-	74	53.937	ENSGAGG00000018445	-	78	53.937
ENSGAGG00000020168	-	79	53.247	ENSGAGG00000000971	-	94	55.233
ENSGAGG00000020168	-	74	60.714	ENSGAGG00000009272	-	99	58.451
ENSGAGG00000020168	-	81	55.516	ENSGAGG00000014389	-	93	55.516
ENSGAGG00000020168	-	83	56.401	ENSGAGG00000010833	-	89	56.401
ENSGAGG00000020168	-	71	57.317	ENSGAGG00000015232	-	86	57.317
ENSGAGG00000020168	-	75	62.338	ENSGAGG00000006683	-	92	59.155
ENSGAGG00000020168	-	71	52.273	ENSGAGG00000011574	-	79	52.273
ENSGAGG00000020168	-	76	50.000	ENSGAGG00000014356	-	90	50.000
ENSGAGG00000020168	-	81	50.000	ENSGAGG00000011399	-	90	50.781
ENSGAGG00000020168	-	70	54.741	ENSGAGG00000012452	-	70	54.741
ENSGAGG00000020168	-	81	58.451	ENSGAGG00000001387	-	70	58.451
ENSGAGG00000020168	-	76	58.025	ENSGAGG00000017986	-	90	57.225
ENSGAGG00000020168	-	84	44.159	ENSGAGG00000020594	-	91	53.917
ENSGAGG00000020168	-	77	42.561	ENSGAGG00000022571	ZNF319	88	42.657
ENSGAGG00000020168	-	75	56.219	ENSGAGG00000001645	-	66	56.219
ENSGAGG00000020168	-	85	47.541	ENSGAGG00000011366	-	97	49.508
ENSGAGG00000020168	-	74	54.651	ENSGAGG00000002828	-	69	54.643
ENSGAGG00000020168	-	70	46.575	ENSGAGG00000019349	-	78	46.575
ENSGAGG00000020168	-	80	54.231	ENSGAGG00000011487	-	93	54.231
ENSGAGG00000020168	-	69	51.176	ENSGAGG00000013021	-	96	51.176
ENSGAGG00000020168	-	77	51.724	ENSGAGG00000010324	-	70	56.180
ENSGAGG00000020168	-	77	50.980	ENSGAGG00000008773	-	84	55.363

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000020168	-	74	48.410	ENSAOCG00000022276	-	93	48.410	Amphiprion_ocellaris
ENSGAGG00000020168	-	77	45.230	ENSACLG00000026538	-	85	45.230	Astatotilapia_calliptera
ENSGAGG00000020168	-	75	47.644	ENSKMAG00000002448	-	96	47.644	Kryptolebias_marmoratus
ENSGAGG00000020168	-	73	51.429	ENSMODG00000024585	-	76	51.429	Monodelphis_domestica
ENSGAGG00000020168	-	71	50.988	ENSPCIG00000019488	-	82	42.815	Phascolarctos_cinereus
ENSGAGG00000020168	-	75	30.570	ENSPFOG00000008519	-	100	32.215	Poecilia_formosa
ENSGAGG00000020168	-	79	44.444	ENSPNYG00000018360	-	85	44.444	Pundamilia_nyererei
ENSGAGG00000020168	-	70	49.711	ENSSLDG00000018598	-	87	49.711	Seriola_lalandi_dorsalis
ENSGAGG00000020168	-	70	51.282	ENSXMAG00000022591	-	74	51.282	Xiphophorus_maculatus