EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000020227 (Gene tree)
Gene ID: -
Gene Symbol: LRPPRC
Alias: GP130|LRP130|LSFC
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 158765 bases
Position: chrPPEB01001791.1:126571-285335
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000027832	PPR	PF01535.20	6.6e-34	1	7
ENSGAGP00000027832	PPR	PF01535.20	6.6e-34	2	7
ENSGAGP00000027832	PPR	PF01535.20	6.6e-34	3	7
ENSGAGP00000027832	PPR	PF01535.20	6.6e-34	4	7
ENSGAGP00000027832	PPR	PF01535.20	6.6e-34	5	7
ENSGAGP00000027832	PPR	PF01535.20	6.6e-34	6	7
ENSGAGP00000027832	PPR	PF01535.20	6.6e-34	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000031617	LRPPRC-201	4586	-	ENSGAGP00000027832	1400 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000020227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000020227	LRPPRC	98	63.307	ENSG00000138095	LRPPRC	100	62.740	Homo_sapiens
ENSGAGG00000020227	LRPPRC	94	66.464	ENSAPLG00000008902	LRPPRC	99	66.464	Anas_platyrhynchos
ENSGAGG00000020227	LRPPRC	99	64.296	ENSBTAG00000016368	LRPPRC	99	64.367	Bos_taurus
ENSGAGG00000020227	LRPPRC	98	64.172	ENSCAFG00000002527	LRPPRC	97	64.554	Canis_familiaris
ENSGAGG00000020227	LRPPRC	98	63.590	ENSCAFG00020025995	LRPPRC	98	63.656	Canis_lupus_dingo
ENSGAGG00000020227	LRPPRC	96	66.003	ENSTSYG00000013197	LRPPRC	96	65.221	Carlito_syrichta
ENSGAGG00000020227	LRPPRC	99	90.343	ENSCPBG00000005446	LRPPRC	99	90.783	Chrysemys_picta_bellii
ENSGAGG00000020227	LRPPRC	79	30.366	FBgn0284256	bsf	80	30.642	Drosophila_melanogaster
ENSGAGG00000020227	LRPPRC	98	65.164	ENSEASG00005003715	LRPPRC	99	64.099	Equus_asinus_asinus
ENSGAGG00000020227	LRPPRC	99	64.613	ENSECAG00000023814	LRPPRC	94	65.756	Equus_caballus
ENSGAGG00000020227	LRPPRC	99	64.352	ENSGALG00000009967	LRPPRC	100	64.689	Gallus_gallus
ENSGAGG00000020227	LRPPRC	99	63.392	ENSMLEG00000043673	LRPPRC	100	63.534	Mandrillus_leucophaeus
ENSGAGG00000020227	LRPPRC	96	64.819	ENSMGAG00000010201	LRPPRC	100	64.819	Meleagris_gallopavo
ENSGAGG00000020227	LRPPRC	99	63.105	MGP_CAROLIEiJ_G0021927	Lrpprc	97	64.023	Mus_caroli
ENSGAGG00000020227	LRPPRC	99	62.837	ENSMUSG00000024120	Lrpprc	97	63.950	Mus_musculus
ENSGAGG00000020227	LRPPRC	99	62.908	MGP_PahariEiJ_G0020917	Lrpprc	97	63.950	Mus_pahari
ENSGAGG00000020227	LRPPRC	99	62.837	MGP_SPRETEiJ_G0022843	Lrpprc	97	63.950	Mus_spretus
ENSGAGG00000020227	LRPPRC	85	52.812	ENSMEUG00000004430	-	92	52.727	Notamacropus_eugenii
ENSGAGG00000020227	LRPPRC	98	62.292	ENSPEMG00000022720	Lrpprc	96	62.592	Peromyscus_maniculatus_bairdii
ENSGAGG00000020227	LRPPRC	99	63.409	ENSPCIG00000006872	LRPPRC	96	63.971	Phascolarctos_cinereus
ENSGAGG00000020227	LRPPRC	99	63.830	ENSPCOG00000001309	LRPPRC	98	64.244	Propithecus_coquereli
ENSGAGG00000020227	LRPPRC	89	68.054	ENSSPUG00000005188	LRPPRC	99	68.054	Sphenodon_punctatus
ENSGAGG00000020227	LRPPRC	66	62.443	ENSTBEG00000011055	-	63	62.443	Tupaia_belangeri
ENSGAGG00000020227	LRPPRC	97	64.495	ENSUAMG00000022940	LRPPRC	97	64.823	Ursus_americanus
ENSGAGG00000020227	LRPPRC	97	64.275	ENSUMAG00000012801	LRPPRC	97	64.602	Ursus_maritimus
ENSGAGG00000020227	LRPPRC	98	62.915	ENSVVUG00000002339	LRPPRC	99	63.918	Vulpes_vulpes