EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000020527 (Gene tree)
Gene ID: -
Gene Symbol: KATNB1
Alias: -
Full Name: katanin regulatory subunit B1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 27271 bases
Position: chrPPEB01001799.1:213155-240425
Accession: 6217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000028253	eIF2A	PF08662.11	9.6e-07	1	1
ENSGAGP00000028246	eIF2A	PF08662.11	1.1e-06	1	1
ENSGAGP00000028249	eIF2A	PF08662.11	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000032101	KATNB1-201	3447	-	ENSGAGP00000028246	657 (aa)	-	-
ENSGAGT00000032108	KATNB1-203	3511	-	ENSGAGP00000028253	632 (aa)	-	-
ENSGAGT00000032104	KATNB1-202	3586	-	ENSGAGP00000028249	657 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000020527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000020527	KATNB1	100	99.239	ENSCPBG00000026959	KATNB1	100	99.239	Chrysemys_picta_bellii
ENSGAGG00000020527	KATNB1	70	40.604	FBgn0040207	kat80	54	41.219	Drosophila_melanogaster
ENSGAGG00000020527	KATNB1	100	86.322	ENSFALG00000006902	KATNB1	100	86.322	Ficedula_albicollis
ENSGAGG00000020527	KATNB1	100	85.236	ENSGALG00000034373	KATNB1	100	85.236	Gallus_gallus
ENSGAGG00000020527	KATNB1	100	91.781	ENSPSIG00000014651	KATNB1	100	91.781	Pelodiscus_sinensis
ENSGAGG00000020527	KATNB1	100	88.737	ENSSPUG00000007498	KATNB1	100	88.737	Sphenodon_punctatus
ENSGAGG00000020527	KATNB1	100	85.263	ENSTGUG00000004876	KATNB1	100	85.414	Taeniopygia_guttata