EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000020547 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38A
Alias: FLJ14936|Prp38
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 6081 bases
Position: chrPPEB01000054.1:119239-125319
Accession: 25930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000028288	PRP38	PF03371.15	9.4e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000032143	PRPF38A-201	1748	-	ENSGAGP00000028288	312 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000020547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000020547	PRPF38A	100	98.397	ENSG00000134748	PRPF38A	100	98.397	Homo_sapiens
ENSGAGG00000020547	PRPF38A	71	89.140	ENSAPOG00000011652	prpf38a	100	82.109	Acanthochromis_polyacanthus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSAMEG00000009319	PRPF38A	100	98.397	Ailuropoda_melanoleuca
ENSGAGG00000020547	PRPF38A	71	86.878	ENSACIG00000012292	prpf38a	76	86.147	Amphilophus_citrinellus
ENSGAGG00000020547	PRPF38A	71	89.140	ENSAOCG00000018004	prpf38a	100	82.109	Amphiprion_ocellaris
ENSGAGG00000020547	PRPF38A	71	89.140	ENSAPEG00000021414	prpf38a	100	82.109	Amphiprion_percula
ENSGAGG00000020547	PRPF38A	71	88.688	ENSATEG00000004608	prpf38a	100	81.470	Anabas_testudineus
ENSGAGG00000020547	PRPF38A	79	98.381	ENSAPLG00000005827	PRPF38A	99	98.381	Anas_platyrhynchos
ENSGAGG00000020547	PRPF38A	100	96.795	ENSACAG00000008249	PRPF38A	100	96.795	Anolis_carolinensis
ENSGAGG00000020547	PRPF38A	100	98.397	ENSANAG00000027839	PRPF38A	100	98.397	Aotus_nancymaae
ENSGAGG00000020547	PRPF38A	100	67.089	ENSANAG00000029204	-	100	62.658	Aotus_nancymaae
ENSGAGG00000020547	PRPF38A	71	86.878	ENSACLG00000021595	prpf38a	100	80.511	Astatotilapia_calliptera
ENSGAGG00000020547	PRPF38A	100	81.470	ENSAMXG00000029274	prpf38a	100	81.470	Astyanax_mexicanus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSBTAG00000002720	PRPF38A	100	98.397	Bos_taurus
ENSGAGG00000020547	PRPF38A	63	63.077	WBGene00008380	prp-38	59	64.894	Caenorhabditis_elegans
ENSGAGG00000020547	PRPF38A	100	98.397	ENSCJAG00000021594	PRPF38A	100	98.397	Callithrix_jacchus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSCAFG00000003740	PRPF38A	100	98.397	Canis_familiaris
ENSGAGG00000020547	PRPF38A	100	98.397	ENSCAFG00020010939	PRPF38A	100	98.397	Canis_lupus_dingo
ENSGAGG00000020547	PRPF38A	100	98.397	ENSCHIG00000024730	PRPF38A	100	98.397	Capra_hircus
ENSGAGG00000020547	PRPF38A	86	97.026	ENSTSYG00000031994	-	95	97.026	Carlito_syrichta
ENSGAGG00000020547	PRPF38A	100	98.397	ENSTSYG00000009868	-	100	98.397	Carlito_syrichta
ENSGAGG00000020547	PRPF38A	100	98.397	ENSCPOG00000005079	PRPF38A	100	98.397	Cavia_porcellus
ENSGAGG00000020547	PRPF38A	100	98.077	ENSCCAG00000026502	PRPF38A	100	98.077	Cebus_capucinus
ENSGAGG00000020547	PRPF38A	100	63.782	ENSCATG00000044190	-	100	62.500	Cercocebus_atys
ENSGAGG00000020547	PRPF38A	100	98.397	ENSCATG00000032296	PRPF38A	100	98.397	Cercocebus_atys
ENSGAGG00000020547	PRPF38A	100	98.397	ENSCLAG00000005816	PRPF38A	100	98.397	Chinchilla_lanigera
ENSGAGG00000020547	PRPF38A	78	96.875	ENSCHOG00000008388	PRPF38A	77	96.875	Choloepus_hoffmanni
ENSGAGG00000020547	PRPF38A	100	99.679	ENSCPBG00000014791	PRPF38A	100	99.679	Chrysemys_picta_bellii
ENSGAGG00000020547	PRPF38A	70	70.507	ENSCSAVG00000009580	-	78	65.678	Ciona_savignyi
ENSGAGG00000020547	PRPF38A	96	98.328	ENSCANG00000032608	PRPF38A	100	98.328	Colobus_angolensis_palliatus
ENSGAGG00000020547	PRPF38A	100	98.718	ENSCGRG00001018502	-	100	98.718	Cricetulus_griseus_chok1gshd
ENSGAGG00000020547	PRPF38A	74	83.983	ENSCGRG00001002557	-	78	83.983	Cricetulus_griseus_chok1gshd
ENSGAGG00000020547	PRPF38A	100	98.718	ENSCGRG00000014868	Prpf38a	100	98.718	Cricetulus_griseus_crigri
ENSGAGG00000020547	PRPF38A	71	87.330	ENSCSEG00000001269	prpf38a	79	86.580	Cynoglossus_semilaevis
ENSGAGG00000020547	PRPF38A	71	89.140	ENSCVAG00000012305	prpf38a	100	81.470	Cyprinodon_variegatus
ENSGAGG00000020547	PRPF38A	100	80.831	ENSDARG00000039213	prpf38a	100	80.831	Danio_rerio
ENSGAGG00000020547	PRPF38A	100	98.397	ENSDNOG00000042326	PRPF38A	100	98.397	Dasypus_novemcinctus
ENSGAGG00000020547	PRPF38A	84	82.129	ENSDORG00000025371	-	78	86.344	Dipodomys_ordii
ENSGAGG00000020547	PRPF38A	100	84.936	ENSDORG00000023857	-	100	84.936	Dipodomys_ordii
ENSGAGG00000020547	PRPF38A	84	82.129	ENSDORG00000023691	-	78	86.344	Dipodomys_ordii
ENSGAGG00000020547	PRPF38A	63	74.619	FBgn0050342	Prp38	57	75.532	Drosophila_melanogaster
ENSGAGG00000020547	PRPF38A	76	80.672	ENSEBUG00000012588	prpf38a	75	80.687	Eptatretus_burgeri
ENSGAGG00000020547	PRPF38A	100	98.397	ENSEASG00005014427	PRPF38A	100	98.397	Equus_asinus_asinus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSECAG00000022628	PRPF38A	100	98.397	Equus_caballus
ENSGAGG00000020547	PRPF38A	71	86.425	ENSELUG00000021094	prpf38a	100	80.192	Esox_lucius
ENSGAGG00000020547	PRPF38A	100	98.397	ENSFCAG00000002518	PRPF38A	100	98.397	Felis_catus
ENSGAGG00000020547	PRPF38A	99	85.209	ENSFALG00000003612	-	77	90.476	Ficedula_albicollis
ENSGAGG00000020547	PRPF38A	87	97.417	ENSFALG00000005598	-	100	97.417	Ficedula_albicollis
ENSGAGG00000020547	PRPF38A	100	98.077	ENSFDAG00000011287	PRPF38A	100	98.077	Fukomys_damarensis
ENSGAGG00000020547	PRPF38A	84	78.788	ENSFHEG00000014317	prpf38a	78	87.446	Fundulus_heteroclitus
ENSGAGG00000020547	PRPF38A	53	93.976	ENSGMOG00000011384	prpf38a	54	93.976	Gadus_morhua
ENSGAGG00000020547	PRPF38A	100	98.718	ENSGALG00000010627	PRPF38A	100	98.718	Gallus_gallus
ENSGAGG00000020547	PRPF38A	71	90.045	ENSGAFG00000012422	prpf38a	100	82.109	Gambusia_affinis
ENSGAGG00000020547	PRPF38A	71	86.547	ENSGACG00000005423	prpf38a	100	79.683	Gasterosteus_aculeatus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSGGOG00000003940	PRPF38A	100	98.397	Gorilla_gorilla
ENSGAGG00000020547	PRPF38A	61	91.005	ENSHBUG00000020572	prpf38a	80	90.957	Haplochromis_burtoni
ENSGAGG00000020547	PRPF38A	100	98.397	ENSHGLG00000000475	PRPF38A	100	98.397	Heterocephalus_glaber_female
ENSGAGG00000020547	PRPF38A	100	82.372	ENSHGLG00000007918	-	100	82.051	Heterocephalus_glaber_female
ENSGAGG00000020547	PRPF38A	100	82.372	ENSHGLG00100003928	-	100	82.051	Heterocephalus_glaber_male
ENSGAGG00000020547	PRPF38A	100	98.397	ENSHGLG00100008935	PRPF38A	100	98.397	Heterocephalus_glaber_male
ENSGAGG00000020547	PRPF38A	87	69.373	ENSHCOG00000020781	prpf38a	59	90.957	Hippocampus_comes
ENSGAGG00000020547	PRPF38A	74	87.069	ENSIPUG00000005757	prpf38a	75	87.069	Ictalurus_punctatus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSSTOG00000015610	PRPF38A	100	98.397	Ictidomys_tridecemlineatus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSJJAG00000015811	Prpf38a	100	98.397	Jaculus_jaculus
ENSGAGG00000020547	PRPF38A	71	88.688	ENSKMAG00000006588	prpf38a	100	81.150	Kryptolebias_marmoratus
ENSGAGG00000020547	PRPF38A	96	79.530	ENSLBEG00000020585	prpf38a	100	79.872	Labrus_bergylta
ENSGAGG00000020547	PRPF38A	100	92.949	ENSLACG00000011495	PRPF38A	100	92.949	Latimeria_chalumnae
ENSGAGG00000020547	PRPF38A	100	80.511	ENSLOCG00000006262	prpf38a	100	81.789	Lepisosteus_oculatus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSLAFG00000025862	PRPF38A	100	98.397	Loxodonta_africana
ENSGAGG00000020547	PRPF38A	100	98.397	ENSMFAG00000039449	PRPF38A	100	98.397	Macaca_fascicularis
ENSGAGG00000020547	PRPF38A	87	97.426	ENSMMUG00000014333	PRPF38A	98	97.426	Macaca_mulatta
ENSGAGG00000020547	PRPF38A	100	98.397	ENSMNEG00000031221	PRPF38A	100	98.397	Macaca_nemestrina
ENSGAGG00000020547	PRPF38A	100	64.103	ENSMNEG00000040242	-	100	63.141	Macaca_nemestrina
ENSGAGG00000020547	PRPF38A	100	98.397	ENSMLEG00000041105	PRPF38A	100	98.397	Mandrillus_leucophaeus
ENSGAGG00000020547	PRPF38A	71	88.688	ENSMAMG00000015431	prpf38a	100	81.789	Mastacembelus_armatus
ENSGAGG00000020547	PRPF38A	71	86.878	ENSMZEG00005017838	prpf38a	100	80.511	Maylandia_zebra
ENSGAGG00000020547	PRPF38A	96	98.662	ENSMGAG00000011176	PRPF38A	100	98.662	Meleagris_gallopavo
ENSGAGG00000020547	PRPF38A	85	93.939	ENSMAUG00000018029	-	87	93.939	Mesocricetus_auratus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSMICG00000014193	PRPF38A	100	98.397	Microcebus_murinus
ENSGAGG00000020547	PRPF38A	100	98.718	ENSMOCG00000013080	Prpf38a	100	98.718	Microtus_ochrogaster
ENSGAGG00000020547	PRPF38A	83	80.620	ENSMMOG00000016972	prpf38a	81	86.147	Mola_mola
ENSGAGG00000020547	PRPF38A	100	97.444	ENSMODG00000000644	PRPF38A	100	97.444	Monodelphis_domestica
ENSGAGG00000020547	PRPF38A	71	87.783	ENSMALG00000019363	prpf38a	97	81.150	Monopterus_albus
ENSGAGG00000020547	PRPF38A	100	97.756	MGP_CAROLIEiJ_G0026269	Prpf38a	100	97.756	Mus_caroli
ENSGAGG00000020547	PRPF38A	100	97.756	ENSMUSG00000063800	Prpf38a	100	97.756	Mus_musculus
ENSGAGG00000020547	PRPF38A	100	97.756	MGP_PahariEiJ_G0028602	Prpf38a	100	97.756	Mus_pahari
ENSGAGG00000020547	PRPF38A	100	97.436	MGP_SPRETEiJ_G0027238	Prpf38a	100	97.537	Mus_spretus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSMPUG00000006896	PRPF38A	100	98.397	Mustela_putorius_furo
ENSGAGG00000020547	PRPF38A	100	98.718	ENSNGAG00000011884	Prpf38a	100	98.718	Nannospalax_galili
ENSGAGG00000020547	PRPF38A	71	85.520	ENSNBRG00000004013	prpf38a	74	84.848	Neolamprologus_brichardi
ENSGAGG00000020547	PRPF38A	93	98.270	ENSNLEG00000017999	PRPF38A	93	98.270	Nomascus_leucogenys
ENSGAGG00000020547	PRPF38A	100	66.026	ENSNLEG00000033398	-	94	66.026	Nomascus_leucogenys
ENSGAGG00000020547	PRPF38A	97	72.185	ENSNLEG00000012592	-	99	72.185	Nomascus_leucogenys
ENSGAGG00000020547	PRPF38A	100	94.551	ENSMEUG00000003860	PRPF38A	100	94.551	Notamacropus_eugenii
ENSGAGG00000020547	PRPF38A	77	98.750	ENSOPRG00000008985	PRPF38A	100	98.750	Ochotona_princeps
ENSGAGG00000020547	PRPF38A	100	98.397	ENSODEG00000005869	PRPF38A	100	98.397	Octodon_degus
ENSGAGG00000020547	PRPF38A	71	86.425	ENSONIG00000007816	prpf38a	100	80.192	Oreochromis_niloticus
ENSGAGG00000020547	PRPF38A	100	65.287	ENSOANG00000009541	-	100	65.287	Ornithorhynchus_anatinus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSOCUG00000000963	PRPF38A	100	98.397	Oryctolagus_cuniculus
ENSGAGG00000020547	PRPF38A	96	81.333	ENSORLG00000013485	prpf38a	99	81.410	Oryzias_latipes
ENSGAGG00000020547	PRPF38A	96	81.333	ENSORLG00020002130	prpf38a	99	81.410	Oryzias_latipes_hni
ENSGAGG00000020547	PRPF38A	96	81.000	ENSORLG00015021393	prpf38a	99	81.090	Oryzias_latipes_hsok
ENSGAGG00000020547	PRPF38A	96	80.872	ENSOMEG00000016333	prpf38a	100	80.831	Oryzias_melastigma
ENSGAGG00000020547	PRPF38A	100	98.397	ENSOGAG00000005423	PRPF38A	100	98.397	Otolemur_garnettii
ENSGAGG00000020547	PRPF38A	100	98.397	ENSOARG00000005373	PRPF38A	100	98.397	Ovis_aries
ENSGAGG00000020547	PRPF38A	100	76.282	ENSPPAG00000033867	-	100	76.282	Pan_paniscus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSPPAG00000030905	PRPF38A	100	98.397	Pan_paniscus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSPPRG00000013268	PRPF38A	100	98.397	Panthera_pardus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSPTIG00000015419	PRPF38A	100	98.397	Panthera_tigris_altaica
ENSGAGG00000020547	PRPF38A	100	98.397	ENSPTRG00000000739	PRPF38A	100	98.397	Pan_troglodytes
ENSGAGG00000020547	PRPF38A	100	98.397	ENSPANG00000015483	PRPF38A	100	98.397	Papio_anubis
ENSGAGG00000020547	PRPF38A	100	79.167	ENSPKIG00000011439	prpf38a	100	80.449	Paramormyrops_kingsleyae
ENSGAGG00000020547	PRPF38A	100	98.718	ENSPSIG00000017487	PRPF38A	100	98.718	Pelodiscus_sinensis
ENSGAGG00000020547	PRPF38A	81	82.283	ENSPMGG00000021352	prpf38a	99	78.317	Periophthalmus_magnuspinnatus
ENSGAGG00000020547	PRPF38A	100	92.698	ENSPEMG00000011212	-	100	91.111	Peromyscus_maniculatus_bairdii
ENSGAGG00000020547	PRPF38A	100	98.718	ENSPEMG00000023277	-	100	98.718	Peromyscus_maniculatus_bairdii
ENSGAGG00000020547	PRPF38A	100	97.125	ENSPCIG00000022369	-	100	97.125	Phascolarctos_cinereus
ENSGAGG00000020547	PRPF38A	83	81.081	ENSPFOG00000004248	prpf38a	100	82.109	Poecilia_formosa
ENSGAGG00000020547	PRPF38A	92	76.190	ENSPLAG00000010328	prpf38a	100	82.109	Poecilia_latipinna
ENSGAGG00000020547	PRPF38A	84	78.652	ENSPMEG00000011804	prpf38a	100	82.109	Poecilia_mexicana
ENSGAGG00000020547	PRPF38A	95	72.313	ENSPREG00000002835	prpf38a	58	93.085	Poecilia_reticulata
ENSGAGG00000020547	PRPF38A	100	89.905	ENSPPYG00000001348	PRPF38A	100	89.905	Pongo_abelii
ENSGAGG00000020547	PRPF38A	100	98.397	ENSPCAG00000013328	PRPF38A	100	98.397	Procavia_capensis
ENSGAGG00000020547	PRPF38A	100	98.397	ENSPCOG00000016387	-	100	98.397	Propithecus_coquereli
ENSGAGG00000020547	PRPF38A	100	75.321	ENSPCOG00000020709	-	76	79.654	Propithecus_coquereli
ENSGAGG00000020547	PRPF38A	100	98.397	ENSPVAG00000009803	PRPF38A	100	98.397	Pteropus_vampyrus
ENSGAGG00000020547	PRPF38A	71	86.878	ENSPNYG00000005571	prpf38a	100	80.511	Pundamilia_nyererei
ENSGAGG00000020547	PRPF38A	100	82.109	ENSPNAG00000010399	prpf38a	100	82.109	Pygocentrus_nattereri
ENSGAGG00000020547	PRPF38A	100	98.397	ENSRNOG00000009451	Prpf38a	100	98.397	Rattus_norvegicus
ENSGAGG00000020547	PRPF38A	100	61.218	ENSRBIG00000034053	-	100	58.333	Rhinopithecus_bieti
ENSGAGG00000020547	PRPF38A	100	98.397	ENSRBIG00000036442	PRPF38A	100	98.397	Rhinopithecus_bieti
ENSGAGG00000020547	PRPF38A	100	98.397	ENSRROG00000032788	PRPF38A	100	98.397	Rhinopithecus_roxellana
ENSGAGG00000020547	PRPF38A	98	77.124	ENSRROG00000040003	-	99	77.124	Rhinopithecus_roxellana
ENSGAGG00000020547	PRPF38A	100	98.397	ENSSBOG00000019515	PRPF38A	100	98.397	Saimiri_boliviensis_boliviensis
ENSGAGG00000020547	PRPF38A	87	96.679	ENSSHAG00000006906	-	100	96.679	Sarcophilus_harrisii
ENSGAGG00000020547	PRPF38A	96	70.395	ENSSHAG00000006029	-	74	80.995	Sarcophilus_harrisii
ENSGAGG00000020547	PRPF38A	100	79.553	ENSSFOG00015013572	prpf38a	100	80.192	Scleropages_formosus
ENSGAGG00000020547	PRPF38A	71	88.235	ENSSMAG00000015379	prpf38a	75	87.446	Scophthalmus_maximus
ENSGAGG00000020547	PRPF38A	71	88.688	ENSSDUG00000001324	prpf38a	100	81.789	Seriola_dumerili
ENSGAGG00000020547	PRPF38A	71	88.688	ENSSLDG00000014803	prpf38a	100	81.789	Seriola_lalandi_dorsalis
ENSGAGG00000020547	PRPF38A	100	81.410	ENSSARG00000014458	PRPF38A	100	81.410	Sorex_araneus
ENSGAGG00000020547	PRPF38A	100	96.474	ENSSPUG00000013259	PRPF38A	100	96.474	Sphenodon_punctatus
ENSGAGG00000020547	PRPF38A	71	71.041	ENSSPAG00000010449	prpf38a	100	64.423	Stegastes_partitus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSSSCG00000028288	PRPF38A	100	98.397	Sus_scrofa
ENSGAGG00000020547	PRPF38A	100	94.231	ENSTGUG00000008995	PRPF38A	100	94.231	Taeniopygia_guttata
ENSGAGG00000020547	PRPF38A	71	86.878	ENSTRUG00000003374	prpf38a	71	86.147	Takifugu_rubripes
ENSGAGG00000020547	PRPF38A	71	85.202	ENSTNIG00000005533	prpf38a	100	79.048	Tetraodon_nigroviridis
ENSGAGG00000020547	PRPF38A	100	97.756	ENSTBEG00000000725	PRPF38A	100	97.756	Tupaia_belangeri
ENSGAGG00000020547	PRPF38A	100	98.397	ENSTTRG00000016139	PRPF38A	100	98.397	Tursiops_truncatus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSUAMG00000000625	PRPF38A	100	98.397	Ursus_americanus
ENSGAGG00000020547	PRPF38A	100	98.397	ENSUMAG00000022674	PRPF38A	100	98.397	Ursus_maritimus
ENSGAGG00000020547	PRPF38A	74	97.835	ENSVPAG00000000907	PRPF38A	100	92.628	Vicugna_pacos
ENSGAGG00000020547	PRPF38A	100	98.397	ENSVVUG00000004475	PRPF38A	100	98.397	Vulpes_vulpes
ENSGAGG00000020547	PRPF38A	100	84.665	ENSXETG00000008060	prpf38a	100	88.498	Xenopus_tropicalis
ENSGAGG00000020547	PRPF38A	71	87.892	ENSXCOG00000007393	prpf38a	77	87.124	Xiphophorus_couchianus
ENSGAGG00000020547	PRPF38A	71	90.045	ENSXMAG00000026143	prpf38a	100	82.109	Xiphophorus_maculatus