EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAGG00000020579 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Minus strand
Length
6106 bases
Position
chrPPEB01001254.1:282223-288328
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000028356zf-CCCHPF00642.245.1e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000032214-540-ENSGAGP00000028356179 (aa)--
Gene Model
Click here to download ENSGAGG00000020579's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020579's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAGG00000020579-9282.424ENSGAGG00000021835CPSF46878.022
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000020579-9281.212ENSG00000160917CPSF410088.393Homo_sapiens
ENSGAGG00000020579-5163.830ENSAPOG00000004921cpsf45063.830Acanthochromis_polyacanthus
ENSGAGG00000020579-9281.212ENSAMEG00000006252CPSF46876.923Ailuropoda_melanoleuca
ENSGAGG00000020579-10075.275ENSACIG00000009248cpsf47675.275Amphilophus_citrinellus
ENSGAGG00000020579-10075.275ENSAOCG00000019616cpsf46975.275Amphiprion_ocellaris
ENSGAGG00000020579-10075.275ENSAPEG00000011679cpsf46975.275Amphiprion_percula
ENSGAGG00000020579-10074.725ENSATEG00000007010cpsf47474.725Anabas_testudineus
ENSGAGG00000020579-9280.606ENSACAG00000012941CPSF45580.606Anolis_carolinensis
ENSGAGG00000020579-9281.212ENSANAG00000021360CPSF46876.923Aotus_nancymaae
ENSGAGG00000020579-10075.275ENSACLG00000010374cpsf48175.275Astatotilapia_calliptera
ENSGAGG00000020579-10076.374ENSAMXG00000031647cpsf47176.374Astyanax_mexicanus
ENSGAGG00000020579-9281.212ENSBTAG00000002090CPSF47576.923Bos_taurus
ENSGAGG00000020579-9281.212ENSCJAG00000015826CPSF46876.923Callithrix_jacchus
ENSGAGG00000020579-9281.212ENSCAFG00000015036CPSF49975.301Canis_familiaris
ENSGAGG00000020579-9273.939ENSCAFG00020014462CPSF46770.330Canis_lupus_dingo
ENSGAGG00000020579-9281.212ENSCHIG00000014313CPSF46876.923Capra_hircus
ENSGAGG00000020579-9281.818ENSTSYG00000005712-7577.473Carlito_syrichta
ENSGAGG00000020579-7778.986ENSTSYG00000008195-7174.074Carlito_syrichta
ENSGAGG00000020579-9473.373ENSTSYG00000014604-7471.429Carlito_syrichta
ENSGAGG00000020579-6487.719ENSCAPG00000013881CPSF45280.916Cavia_aperea
ENSGAGG00000020579-9281.212ENSCPOG00000001783CPSF47576.923Cavia_porcellus
ENSGAGG00000020579-9281.212ENSCCAG00000028291CPSF46876.923Cebus_capucinus
ENSGAGG00000020579-9481.065ENSCATG00000038440CPSF47381.065Cercocebus_atys
ENSGAGG00000020579-9281.212ENSCLAG00000007050CPSF46876.923Chinchilla_lanigera
ENSGAGG00000020579-9281.212ENSCSAG00000017795CPSF46876.923Chlorocebus_sabaeus
ENSGAGG00000020579-6388.393ENSCPBG00000020869CPSF46081.395Chrysemys_picta_bellii
ENSGAGG00000020579-9297.576ENSCPBG00000010269-9997.576Chrysemys_picta_bellii
ENSGAGG00000020579-9265.455ENSCING00000021080-6365.455Ciona_intestinalis
ENSGAGG00000020579-9266.061ENSCSAVG00000011469-5766.061Ciona_savignyi
ENSGAGG00000020579-9976.087ENSCANG00000019384CPSF47976.087Colobus_angolensis_palliatus
ENSGAGG00000020579-9281.212ENSCGRG00001024184Cpsf47576.923Cricetulus_griseus_chok1gshd
ENSGAGG00000020579-9281.212ENSCGRG00000013892Cpsf46876.923Cricetulus_griseus_crigri
ENSGAGG00000020579-10075.275ENSCSEG00000019055cpsf46975.275Cynoglossus_semilaevis
ENSGAGG00000020579-10076.374ENSCVAG00000016528cpsf46976.374Cyprinodon_variegatus
ENSGAGG00000020579-9280.000ENSDARG00000020217cpsf46180.000Danio_rerio
ENSGAGG00000020579-9281.212ENSDNOG00000006344CPSF46876.923Dasypus_novemcinctus
ENSGAGG00000020579-6388.393ENSDORG00000000742Cpsf45981.395Dipodomys_ordii
ENSGAGG00000020579-9266.467FBgn0015621Clp5666.467Drosophila_melanogaster
ENSGAGG00000020579-9280.606ENSETEG00000002608CPSF46180.606Echinops_telfairi
ENSGAGG00000020579-9274.545ENSEBUG00000012552cpsf46874.545Eptatretus_burgeri
ENSGAGG00000020579-9281.212ENSEASG00005002487CPSF47576.923Equus_asinus_asinus
ENSGAGG00000020579-9281.212ENSECAG00000007525CPSF46876.923Equus_caballus
ENSGAGG00000020579-9280.000ENSELUG00000011481cpsf46180.000Esox_lucius
ENSGAGG00000020579-9281.212ENSFCAG00000015070CPSF46876.923Felis_catus
ENSGAGG00000020579-10077.473ENSFALG00000013799CPSF47577.473Ficedula_albicollis
ENSGAGG00000020579-9261.047ENSFALG00000012906-10061.047Ficedula_albicollis
ENSGAGG00000020579-7784.783ENSFDAG00000014092CPSF45784.783Fukomys_damarensis
ENSGAGG00000020579-10075.824ENSFHEG00000010880cpsf46975.824Fundulus_heteroclitus
ENSGAGG00000020579-9278.443ENSGMOG00000002330cpsf46578.443Gadus_morhua
ENSGAGG00000020579-9254.878ENSGALG00000004441-5954.878Gallus_gallus
ENSGAGG00000020579-10077.473ENSGALG00000004714CPSF47577.473Gallus_gallus
ENSGAGG00000020579-10076.374ENSGAFG00000010580cpsf46976.374Gambusia_affinis
ENSGAGG00000020579-9276.048ENSGACG00000007792cpsf46676.048Gasterosteus_aculeatus
ENSGAGG00000020579-9281.212ENSGGOG00000015131CPSF46876.923Gorilla_gorilla
ENSGAGG00000020579-10075.275ENSHBUG00000013699cpsf46975.275Haplochromis_burtoni
ENSGAGG00000020579-9281.212ENSHGLG00000017150CPSF46776.923Heterocephalus_glaber_female
ENSGAGG00000020579-9253.333ENSHGLG00100017302-8451.648Heterocephalus_glaber_male
ENSGAGG00000020579-7383.077ENSHGLG00100009215-5583.077Heterocephalus_glaber_male
ENSGAGG00000020579-9278.182ENSHCOG00000004397cpsf46278.182Hippocampus_comes
ENSGAGG00000020579-9279.394ENSIPUG00000017147cpsf46775.275Ictalurus_punctatus
ENSGAGG00000020579-9281.212ENSSTOG00000001688CPSF47576.923Ictidomys_tridecemlineatus
ENSGAGG00000020579-9281.212ENSJJAG00000019426Cpsf46876.923Jaculus_jaculus
ENSGAGG00000020579-10075.275ENSKMAG00000015642cpsf46975.275Kryptolebias_marmoratus
ENSGAGG00000020579-10078.022ENSLACG00000010938CPSF46778.022Latimeria_chalumnae
ENSGAGG00000020579-9280.120ENSLACG00000018470-6880.120Latimeria_chalumnae
ENSGAGG00000020579-9280.606ENSLOCG00000004814cpsf46876.923Lepisosteus_oculatus
ENSGAGG00000020579-9281.212ENSLAFG00000000159CPSF46181.212Loxodonta_africana
ENSGAGG00000020579-9976.087ENSMFAG00000001462CPSF47976.087Macaca_fascicularis
ENSGAGG00000020579-9281.212ENSMMUG00000019191CPSF46876.923Macaca_mulatta
ENSGAGG00000020579-9976.087ENSMNEG00000032306CPSF47976.087Macaca_nemestrina
ENSGAGG00000020579-9481.065ENSMLEG00000034721CPSF47381.065Mandrillus_leucophaeus
ENSGAGG00000020579-10075.275ENSMAMG00000006244cpsf46875.275Mastacembelus_armatus
ENSGAGG00000020579-10075.275ENSMZEG00005007515cpsf46975.275Maylandia_zebra
ENSGAGG00000020579-8179.054ENSMGAG00000004235CPSF47179.054Meleagris_gallopavo
ENSGAGG00000020579-9281.212ENSMAUG00000021253Cpsf46876.923Mesocricetus_auratus
ENSGAGG00000020579-9281.212ENSMICG00000017429CPSF46876.923Microcebus_murinus
ENSGAGG00000020579-9281.212ENSMOCG00000014901Cpsf46876.923Microtus_ochrogaster
ENSGAGG00000020579-10074.176ENSMMOG00000001813cpsf49573.333Mola_mola
ENSGAGG00000020579-9281.818ENSMODG00000001367CPSF46877.473Monodelphis_domestica
ENSGAGG00000020579-10074.725ENSMALG00000012611cpsf46874.725Monopterus_albus
ENSGAGG00000020579-9281.212MGP_CAROLIEiJ_G0028012Cpsf47576.923Mus_caroli
ENSGAGG00000020579-9281.212ENSMUSG00000029625Cpsf47576.923Mus_musculus
ENSGAGG00000020579-9281.212MGP_PahariEiJ_G0024581Cpsf47576.923Mus_pahari
ENSGAGG00000020579-9281.212MGP_SPRETEiJ_G0029013Cpsf47576.923Mus_spretus
ENSGAGG00000020579-9281.212ENSMPUG00000016508CPSF46876.923Mustela_putorius_furo
ENSGAGG00000020579-7384.733ENSMLUG00000010980CPSF47179.054Myotis_lucifugus
ENSGAGG00000020579-9281.212ENSNGAG00000001567Cpsf46876.923Nannospalax_galili
ENSGAGG00000020579-8579.355ENSNBRG00000003943cpsf46379.355Neolamprologus_brichardi
ENSGAGG00000020579-9281.212ENSNLEG00000011074CPSF47576.923Nomascus_leucogenys
ENSGAGG00000020579-9281.818ENSMEUG00000006955CPSF46877.473Notamacropus_eugenii
ENSGAGG00000020579-9280.606ENSOPRG00000013663CPSF46876.374Ochotona_princeps
ENSGAGG00000020579-9269.697ENSODEG00000018283-6069.697Octodon_degus
ENSGAGG00000020579-9281.212ENSODEG00000011181-6876.923Octodon_degus
ENSGAGG00000020579-10059.140ENSODEG00000009779-7159.140Octodon_degus
ENSGAGG00000020579-10075.275ENSONIG00000008495cpsf46975.275Oreochromis_niloticus
ENSGAGG00000020579-9274.699ENSOANG00000009568-5974.699Ornithorhynchus_anatinus
ENSGAGG00000020579-7384.733ENSOANG00000007729CPSF45684.733Ornithorhynchus_anatinus
ENSGAGG00000020579-10075.824ENSORLG00000022798cpsf46975.824Oryzias_latipes
ENSGAGG00000020579-10075.824ENSORLG00020008548cpsf46975.824Oryzias_latipes_hni
ENSGAGG00000020579-10075.275ENSORLG00015019575cpsf46975.275Oryzias_latipes_hsok
ENSGAGG00000020579-10075.824ENSOMEG00000005176cpsf46975.824Oryzias_melastigma
ENSGAGG00000020579-9281.212ENSOGAG00000010884CPSF46876.923Otolemur_garnettii
ENSGAGG00000020579-9273.939ENSOARG00000018668CPSF46073.939Ovis_aries
ENSGAGG00000020579-9281.212ENSPPAG00000043355CPSF46876.923Pan_paniscus
ENSGAGG00000020579-9281.212ENSPPRG00000003134CPSF46876.923Panthera_pardus
ENSGAGG00000020579-7786.232ENSPTIG00000005604CPSF45880.645Panthera_tigris_altaica
ENSGAGG00000020579-9281.212ENSPTRG00000019453CPSF46876.923Pan_troglodytes
ENSGAGG00000020579-9976.087ENSPANG00000023123CPSF47976.087Papio_anubis
ENSGAGG00000020579-9279.394ENSPKIG00000014278cpsf46079.394Paramormyrops_kingsleyae
ENSGAGG00000020579-6388.393ENSPSIG00000011229CPSF46081.395Pelodiscus_sinensis
ENSGAGG00000020579-6491.228ENSPSIG00000018198-5991.228Pelodiscus_sinensis
ENSGAGG00000020579-10069.231ENSPMGG00000017735cpsf47669.231Periophthalmus_magnuspinnatus
ENSGAGG00000020579-9281.212ENSPEMG00000004508Cpsf46876.923Peromyscus_maniculatus_bairdii
ENSGAGG00000020579-9281.818ENSPCIG00000024776CPSF46877.473Phascolarctos_cinereus
ENSGAGG00000020579-10076.374ENSPFOG00000014912cpsf46976.374Poecilia_formosa
ENSGAGG00000020579-9876.836ENSPLAG00000009599cpsf47276.836Poecilia_latipinna
ENSGAGG00000020579-10076.374ENSPMEG00000009790cpsf46976.374Poecilia_mexicana
ENSGAGG00000020579-9280.000ENSPREG00000018166cpsf46380.000Poecilia_reticulata
ENSGAGG00000020579-7384.615ENSPPYG00000017378CPSF45584.615Pongo_abelii
ENSGAGG00000020579-9280.606ENSPCAG00000001892CPSF46180.606Procavia_capensis
ENSGAGG00000020579-9281.212ENSPCOG00000012771CPSF46876.923Propithecus_coquereli
ENSGAGG00000020579-9273.333ENSPVAG00000007531CPSF46869.780Pteropus_vampyrus
ENSGAGG00000020579-10075.275ENSPNYG00000018559cpsf46975.275Pundamilia_nyererei
ENSGAGG00000020579-9280.606ENSPNAG00000003736cpsf46180.606Pygocentrus_nattereri
ENSGAGG00000020579-9281.212ENSRNOG00000000985Cpsf47576.923Rattus_norvegicus
ENSGAGG00000020579-7385.385ENSRBIG00000033886CPSF45685.385Rhinopithecus_bieti
ENSGAGG00000020579-9281.212ENSRROG00000040431CPSF47576.923Rhinopithecus_roxellana
ENSGAGG00000020579-9281.212ENSSBOG00000020493CPSF46881.395Saimiri_boliviensis_boliviensis
ENSGAGG00000020579-9281.818ENSSHAG00000011533CPSF46877.473Sarcophilus_harrisii
ENSGAGG00000020579-9280.000ENSSFOG00015007883cpsf46080.000Scleropages_formosus
ENSGAGG00000020579-9277.576ENSSMAG00000006374cpsf46877.576Scophthalmus_maximus
ENSGAGG00000020579-10075.275ENSSDUG00000018887cpsf46875.275Seriola_dumerili
ENSGAGG00000020579-10075.275ENSSLDG00000019078cpsf46875.275Seriola_lalandi_dorsalis
ENSGAGG00000020579-7385.385ENSSARG00000012416CPSF45685.385Sorex_araneus
ENSGAGG00000020579-10077.473ENSSPUG00000003549CPSF46877.473Sphenodon_punctatus
ENSGAGG00000020579-10079.444ENSSPUG00000014803-8179.444Sphenodon_punctatus
ENSGAGG00000020579-10075.275ENSSPAG00000006174cpsf47675.275Stegastes_partitus
ENSGAGG00000020579-9281.212ENSSSCG00000026896CPSF47576.923Sus_scrofa
ENSGAGG00000020579-10076.630ENSTGUG00000007552CPSF47576.630Taeniopygia_guttata
ENSGAGG00000020579-10074.176ENSTRUG00000024220cpsf46974.176Takifugu_rubripes
ENSGAGG00000020579-10074.176ENSTNIG00000006265cpsf46974.176Tetraodon_nigroviridis
ENSGAGG00000020579-7379.231ENSTBEG00000011406CPSF45579.231Tupaia_belangeri
ENSGAGG00000020579-9281.212ENSTTRG00000003007CPSF46876.923Tursiops_truncatus
ENSGAGG00000020579-9281.212ENSUAMG00000008051CPSF47076.923Ursus_americanus
ENSGAGG00000020579-9281.212ENSUMAG00000009474CPSF47576.923Ursus_maritimus
ENSGAGG00000020579-9281.212ENSVVUG00000008824CPSF47576.923Vulpes_vulpes
ENSGAGG00000020579-9279.394ENSXETG00000004641cpsf4l6179.394Xenopus_tropicalis
ENSGAGG00000020579-9276.571ENSXETG00000009892cpsf46972.917Xenopus_tropicalis
ENSGAGG00000020579-10076.374ENSXCOG00000016040cpsf46976.374Xiphophorus_couchianus
ENSGAGG00000020579-10076.374ENSXMAG00000024670cpsf46976.374Xiphophorus_maculatus

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