EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000020594 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 18941 bases
Position: chrPPEB01008363.1:26646-45586
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	1	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	2	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	3	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	4	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	5	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	6	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	7	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	8	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	9	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	10	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	11	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	12	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	13	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	14	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	15	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	16	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	17	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	18	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	19	20
ENSGAGP00000028410	zf-C2H2	PF00096.26	8.7e-112	20	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	1	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	2	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	3	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	4	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	5	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	6	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	7	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	8	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	9	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	10	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	11	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	12	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	13	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	14	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	15	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	16	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	17	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	18	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	19	20
ENSGAGP00000028469	zf-C2H2	PF00096.26	4.1e-111	20	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	1	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	2	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	3	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	4	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	5	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	6	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	7	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	8	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	9	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	10	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	11	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	12	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	13	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	14	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	15	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	16	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	17	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	18	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	19	20
ENSGAGP00000028423	zf-C2H2	PF00096.26	4.4e-111	20	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	1	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	2	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	3	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	4	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	5	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	6	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	7	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	8	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	9	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	10	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	11	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	12	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	13	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	14	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	15	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	16	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	17	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	18	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	19	20
ENSGAGP00000028449	zf-C2H2	PF00096.26	5.2e-111	20	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	1	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	2	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	3	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	4	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	5	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	6	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	7	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	8	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	9	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	10	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	11	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	12	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	13	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	14	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	15	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	16	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	17	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	18	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	19	20
ENSGAGP00000028466	zf-C2H2	PF00096.26	6.3e-111	20	20
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	1	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	2	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	3	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	4	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	5	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	6	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	7	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	8	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	9	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	10	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	11	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	12	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	13	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	14	15
ENSGAGP00000028390	zf-C2H2	PF00096.26	7e-84	15	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	1	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	2	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	3	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	4	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	5	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	6	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	7	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	8	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	9	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	10	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	11	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	12	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	13	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	14	15
ENSGAGP00000028406	zf-C2H2	PF00096.26	1.2e-83	15	15
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	1	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	2	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	3	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	4	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	5	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	6	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	7	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	8	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	9	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	10	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	11	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	12	13
ENSGAGP00000028417	zf-C2H2	PF00096.26	7.7e-74	13	13
ENSGAGP00000028410	zf-met	PF12874.7	1.6e-08	1	1
ENSGAGP00000028449	zf-met	PF12874.7	7.6e-08	1	1
ENSGAGP00000028469	zf-met	PF12874.7	3e-07	1	1
ENSGAGP00000028423	zf-met	PF12874.7	3.3e-07	1	1
ENSGAGP00000028466	zf-met	PF12874.7	4.6e-07	1	1
ENSGAGP00000028417	zf-met	PF12874.7	3.7e-06	1	1
ENSGAGP00000028406	zf-met	PF12874.7	2.9e-05	1	1
ENSGAGP00000028390	zf-met	PF12874.7	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000032333	-	2376	-	ENSGAGP00000028466	791 (aa)	-	-
ENSGAGT00000032316	-	2178	-	ENSGAGP00000028449	725 (aa)	-	-
ENSGAGT00000032336	-	2331	-	ENSGAGP00000028469	776 (aa)	-	-
ENSGAGT00000032269	-	2013	-	ENSGAGP00000028410	670 (aa)	-	-
ENSGAGT00000032250	-	2043	-	ENSGAGP00000028390	680 (aa)	-	-
ENSGAGT00000032284	-	2340	-	ENSGAGP00000028423	779 (aa)	-	-
ENSGAGT00000032278	-	1857	-	ENSGAGP00000028417	618 (aa)	-	-
ENSGAGT00000032265	-	1998	-	ENSGAGP00000028406	665 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000020594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000020594	-	99	68.642	ENSGAGG00000008773	-	99	68.642
ENSGAGG00000020594	-	91	53.917	ENSGAGG00000020168	-	84	44.159
ENSGAGG00000020594	-	87	42.466	ENSGAGG00000003883	ZNF236	78	42.466
ENSGAGG00000020594	-	96	70.253	ENSGAGG00000015232	-	81	70.253
ENSGAGG00000020594	-	90	49.541	ENSGAGG00000005331	-	93	49.541
ENSGAGG00000020594	-	84	86.047	ENSGAGG00000020134	-	74	86.047
ENSGAGG00000020594	-	99	66.819	ENSGAGG00000019349	-	98	67.442
ENSGAGG00000020594	-	93	78.378	ENSGAGG00000009272	-	99	80.000
ENSGAGG00000020594	-	95	70.732	ENSGAGG00000007230	-	92	70.732
ENSGAGG00000020594	-	98	70.118	ENSGAGG00000004740	-	98	73.125
ENSGAGG00000020594	-	99	72.851	ENSGAGG00000006960	-	98	72.851
ENSGAGG00000020594	-	99	56.204	ENSGAGG00000006323	-	97	60.175
ENSGAGG00000020594	-	92	70.472	ENSGAGG00000009739	-	99	70.472
ENSGAGG00000020594	-	100	62.172	ENSGAGG00000010324	-	96	62.172
ENSGAGG00000020594	-	93	68.657	ENSGAGG00000011574	-	96	68.657
ENSGAGG00000020594	-	93	73.556	ENSGAGG00000006683	-	100	75.152
ENSGAGG00000020594	-	94	53.886	ENSGAGG00000011399	-	99	53.886
ENSGAGG00000020594	-	97	60.797	ENSGAGG00000002828	-	99	60.797
ENSGAGG00000020594	-	73	88.889	ENSGAGG00000001645	-	73	88.889
ENSGAGG00000020594	-	95	55.718	ENSGAGG00000001387	-	76	55.593
ENSGAGG00000020594	-	99	64.474	ENSGAGG00000002179	-	99	65.517
ENSGAGG00000020594	-	93	70.492	ENSGAGG00000014389	-	99	69.604
ENSGAGG00000020594	-	89	35.735	ENSGAGG00000020362	PRDM5	83	34.682
ENSGAGG00000020594	-	93	68.571	ENSGAGG00000013851	-	99	68.571
ENSGAGG00000020594	-	89	47.742	ENSGAGG00000017094	-	53	47.742
ENSGAGG00000020594	-	86	33.482	ENSGAGG00000019591	ZNF770	98	36.364
ENSGAGG00000020594	-	89	38.878	ENSGAGG00000022571	ZNF319	96	37.911
ENSGAGG00000020594	-	95	74.468	ENSGAGG00000002214	-	99	64.946
ENSGAGG00000020594	-	93	54.762	ENSGAGG00000013021	-	98	54.762
ENSGAGG00000020594	-	93	62.241	ENSGAGG00000001469	-	100	61.667
ENSGAGG00000020594	-	91	79.245	ENSGAGG00000011487	-	100	79.245
ENSGAGG00000020594	-	92	71.125	ENSGAGG00000017986	-	99	71.125
ENSGAGG00000020594	-	87	35.714	ENSGAGG00000025218	ZBTB41	50	35.714
ENSGAGG00000020594	-	90	35.360	ENSGAGG00000003095	ZNF865	88	39.706
ENSGAGG00000020594	-	92	51.661	ENSGAGG00000011366	-	99	50.464
ENSGAGG00000020594	-	96	53.191	ENSGAGG00000006846	-	97	56.093
ENSGAGG00000020594	-	95	59.162	ENSGAGG00000006848	-	82	55.882
ENSGAGG00000020594	-	99	77.778	ENSGAGG00000010833	-	95	88.462
ENSGAGG00000020594	-	90	57.255	ENSGAGG00000018445	-	99	57.255
ENSGAGG00000020594	-	96	71.192	ENSGAGG00000015451	-	99	71.192
ENSGAGG00000020594	-	92	67.476	ENSGAGG00000000971	-	92	67.476
ENSGAGG00000020594	-	97	63.978	ENSGAGG00000016529	-	95	63.978
ENSGAGG00000020594	-	92	59.504	ENSGAGG00000005805	-	100	59.504
ENSGAGG00000020594	-	93	52.518	ENSGAGG00000017640	-	95	54.783
ENSGAGG00000020594	-	99	69.828	ENSGAGG00000012452	-	96	69.828
ENSGAGG00000020594	-	87	55.376	ENSGAGG00000004926	-	96	55.376
ENSGAGG00000020594	-	93	64.205	ENSGAGG00000010492	-	85	65.318
ENSGAGG00000020594	-	99	67.323	ENSGAGG00000014356	-	97	66.865
ENSGAGG00000020594	-	98	55.873	ENSGAGG00000018885	-	91	55.369
ENSGAGG00000020594	-	79	47.205	ENSGAGG00000021327	GFI1B	58	47.205

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000020594	-	95	61.498	ENSBTAG00000038088	-	99	64.193	Bos_taurus
ENSGAGG00000020594	-	99	63.451	ENSCAFG00000029340	-	99	63.514	Canis_familiaris
ENSGAGG00000020594	-	99	63.269	ENSCAFG00020014929	-	100	65.176	Canis_lupus_dingo
ENSGAGG00000020594	-	99	63.451	ENSCAFG00020014950	-	100	61.364	Canis_lupus_dingo
ENSGAGG00000020594	-	100	65.714	ENSCPBG00000017494	-	99	62.548	Chrysemys_picta_bellii
ENSGAGG00000020594	-	92	63.605	ENSEASG00005020335	-	97	63.605	Equus_asinus_asinus
ENSGAGG00000020594	-	99	62.720	ENSEASG00005020355	-	100	64.000	Equus_asinus_asinus
ENSGAGG00000020594	-	99	58.439	ENSECAG00000002021	-	98	62.791	Equus_caballus
ENSGAGG00000020594	-	98	64.528	ENSECAG00000013505	-	100	64.528	Equus_caballus
ENSGAGG00000020594	-	90	64.007	ENSECAG00000002193	-	97	64.007	Equus_caballus
ENSGAGG00000020594	-	99	57.742	ENSLACG00000004191	-	91	59.072	Latimeria_chalumnae
ENSGAGG00000020594	-	99	63.265	ENSMPUG00000006213	-	99	63.514	Mustela_putorius_furo
ENSGAGG00000020594	-	99	59.331	ENSMPUG00000008442	-	99	62.602	Mustela_putorius_furo
ENSGAGG00000020594	-	95	61.324	ENSOARG00000003770	-	98	64.007	Ovis_aries
ENSGAGG00000020594	-	99	58.554	ENSPPAG00000037706	-	99	63.369	Pan_paniscus
ENSGAGG00000020594	-	99	62.287	ENSPSIG00000004614	-	99	64.775	Pelodiscus_sinensis
ENSGAGG00000020594	-	96	62.791	ENSSBOG00000022380	-	97	63.904	Saimiri_boliviensis_boliviensis
ENSGAGG00000020594	-	96	62.014	ENSSSCG00000031774	-	99	62.466	Sus_scrofa
ENSGAGG00000020594	-	95	61.446	ENSUAMG00000027381	-	96	65.525	Ursus_americanus
ENSGAGG00000020594	-	99	60.801	ENSUAMG00000028270	-	99	60.801	Ursus_americanus
ENSGAGG00000020594	-	95	58.266	ENSUMAG00000004054	-	97	62.189	Ursus_maritimus
ENSGAGG00000020594	-	91	65.525	ENSUMAG00000004061	-	96	65.525	Ursus_maritimus
ENSGAGG00000020594	-	92	58.845	ENSVVUG00000002085	-	90	60.533	Vulpes_vulpes
ENSGAGG00000020594	-	99	63.451	ENSVVUG00000001996	-	100	61.364	Vulpes_vulpes