EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000020702 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 14654 bases
Position: chrPPEB01000964.1:216245-230898
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000028577	MMR_HSR1	PF01926.23	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000032456	-	2478	-	ENSGAGP00000028577	216 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000020702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000020702	-	83	37.696	ENSGAGG00000009488	RAB33A	84	37.696
ENSGAGG00000020702	-	73	43.949	ENSGAGG00000018569	RAB22A	81	43.949
ENSGAGG00000020702	-	73	37.888	ENSGAGG00000025340	RAB36	60	37.888
ENSGAGG00000020702	-	82	42.697	ENSGAGG00000004474	RAB30	86	42.697
ENSGAGG00000020702	-	76	46.061	ENSGAGG00000000742	-	82	46.061
ENSGAGG00000020702	-	94	43.137	ENSGAGG00000005319	RAB5A	91	43.137
ENSGAGG00000020702	-	86	43.548	ENSGAGG00000013139	RAB19	84	43.548
ENSGAGG00000020702	-	100	81.944	ENSGAGG00000014814	RAB11A	100	81.944
ENSGAGG00000020702	-	87	43.684	ENSGAGG00000008447	RAB39B	89	43.684
ENSGAGG00000020702	-	99	62.441	ENSGAGG00000020703	RAB25	99	62.441
ENSGAGG00000020702	-	75	39.877	ENSGAGG00000004918	-	80	39.877
ENSGAGG00000020702	-	75	36.025	ENSGAGG00000021701	RAB6A	77	36.025
ENSGAGG00000020702	-	55	31.707	ENSGAGG00000019544	ARL4A	60	31.707
ENSGAGG00000020702	-	100	78.899	ENSGAGG00000012557	-	100	78.899
ENSGAGG00000020702	-	70	34.839	ENSGAGG00000011057	KRAS	88	35.928
ENSGAGG00000020702	-	96	47.343	ENSGAGG00000023956	RAB1B	99	47.343
ENSGAGG00000020702	-	81	38.636	ENSGAGG00000004921	RAB42	85	38.636
ENSGAGG00000020702	-	69	37.333	ENSGAGG00000012709	RAB23	70	36.686
ENSGAGG00000020702	-	69	35.333	ENSGAGG00000019886	-	85	36.420
ENSGAGG00000020702	-	54	35.000	ENSGAGG00000020394	RAB7B	76	35.000
ENSGAGG00000020702	-	75	31.395	ENSGAGG00000015067	RASL11A	72	31.395
ENSGAGG00000020702	-	82	37.158	ENSGAGG00000002936	RAB33B	79	37.158
ENSGAGG00000020702	-	77	52.695	ENSGAGG00000004988	RAB14	78	52.695
ENSGAGG00000020702	-	76	30.303	ENSGAGG00000025053	RRAS2	86	31.073
ENSGAGG00000020702	-	75	47.531	ENSGAGG00000015642	-	78	47.531
ENSGAGG00000020702	-	69	36.000	ENSGAGG00000011790	-	87	36.585
ENSGAGG00000020702	-	75	34.545	ENSGAGG00000021838	RERG	81	34.545
ENSGAGG00000020702	-	75	34.783	ENSGAGG00000022371	-	77	34.783
ENSGAGG00000020702	-	72	41.250	ENSGAGG00000017981	RAB9A	79	41.250
ENSGAGG00000020702	-	73	39.877	ENSGAGG00000012234	RAB7A	78	39.877
ENSGAGG00000020702	-	70	35.484	ENSGAGG00000017673	NRAS	87	36.527
ENSGAGG00000020702	-	79	54.386	ENSGAGG00000023041	RAB2B	80	54.386
ENSGAGG00000020702	-	78	46.429	ENSGAGG00000017207	RAB35	99	41.063
ENSGAGG00000020702	-	78	40.462	ENSGAGG00000012314	RAB9B	86	40.462
ENSGAGG00000020702	-	72	30.380	ENSGAGG00000020094	MRAS	82	31.765
ENSGAGG00000020702	-	99	44.601	ENSGAGG00000006802	RAB1A	100	44.601
ENSGAGG00000020702	-	77	41.317	ENSGAGG00000007278	RAB12	68	41.317
ENSGAGG00000020702	-	91	49.239	ENSGAGG00000005606	RAB2A	99	47.248
ENSGAGG00000020702	-	54	38.462	ENSGAGG00000012473	RAB34	50	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000020702	-	99	80.465	ENSAPOG00000008251	rab11al	99	80.465	Acanthochromis_polyacanthus
ENSGAGG00000020702	-	99	80.000	ENSACIG00000017403	rab11al	99	80.000	Amphilophus_citrinellus
ENSGAGG00000020702	-	99	80.841	ENSAOCG00000015678	rab11al	99	80.841	Amphiprion_ocellaris
ENSGAGG00000020702	-	99	80.841	ENSAPEG00000022135	rab11al	99	80.841	Amphiprion_percula
ENSGAGG00000020702	-	99	80.374	ENSATEG00000006156	rab11al	99	80.374	Anabas_testudineus
ENSGAGG00000020702	-	99	80.465	ENSACLG00000010268	rab11al	99	80.465	Astatotilapia_calliptera
ENSGAGG00000020702	-	94	77.723	ENSAMXG00000024632	rab11al	92	77.723	Astyanax_mexicanus
ENSGAGG00000020702	-	94	99.015	ENSCPBG00000025819	-	99	99.015	Chrysemys_picta_bellii
ENSGAGG00000020702	-	99	80.930	ENSCSEG00000011996	rab11al	99	80.930	Cynoglossus_semilaevis
ENSGAGG00000020702	-	99	80.930	ENSCVAG00000020016	rab11al	99	80.930	Cyprinodon_variegatus
ENSGAGG00000020702	-	99	83.256	ENSDARG00000014340	rab11al	99	83.256	Danio_rerio
ENSGAGG00000020702	-	99	80.000	ENSELUG00000012035	rab11al	99	80.000	Esox_lucius
ENSGAGG00000020702	-	100	91.204	ENSFALG00000002594	-	92	91.204	Ficedula_albicollis
ENSGAGG00000020702	-	94	83.824	ENSFHEG00000000832	rab11al	98	83.824	Fundulus_heteroclitus
ENSGAGG00000020702	-	93	79.104	ENSGMOG00000006450	rab11al	99	79.104	Gadus_morhua
ENSGAGG00000020702	-	100	87.500	ENSGALG00000037802	-	50	87.500	Gallus_gallus
ENSGAGG00000020702	-	99	82.326	ENSGAFG00000021725	rab11al	99	82.326	Gambusia_affinis
ENSGAGG00000020702	-	99	80.000	ENSGACG00000013259	rab11al	99	80.000	Gasterosteus_aculeatus
ENSGAGG00000020702	-	99	80.465	ENSHBUG00000009333	rab11al	99	80.465	Haplochromis_burtoni
ENSGAGG00000020702	-	99	80.000	ENSHCOG00000000232	rab11al	99	80.000	Hippocampus_comes
ENSGAGG00000020702	-	99	80.465	ENSIPUG00000006091	RAB11A	99	80.465	Ictalurus_punctatus
ENSGAGG00000020702	-	99	79.535	ENSKMAG00000015516	rab11al	99	79.535	Kryptolebias_marmoratus
ENSGAGG00000020702	-	99	80.930	ENSLBEG00000016417	rab11al	99	80.930	Labrus_bergylta
ENSGAGG00000020702	-	99	80.930	ENSLACG00000011380	rab11al	99	80.930	Latimeria_chalumnae
ENSGAGG00000020702	-	99	82.710	ENSLOCG00000008865	rab11al	99	82.710	Lepisosteus_oculatus
ENSGAGG00000020702	-	99	80.465	ENSMAMG00000010278	rab11al	99	80.465	Mastacembelus_armatus
ENSGAGG00000020702	-	99	80.465	ENSMZEG00005017514	rab11al	99	80.465	Maylandia_zebra
ENSGAGG00000020702	-	74	94.375	ENSMGAG00000004720	-	95	94.375	Meleagris_gallopavo
ENSGAGG00000020702	-	78	91.124	ENSMMOG00000017117	rab11al	83	91.124	Mola_mola
ENSGAGG00000020702	-	99	79.535	ENSMALG00000004093	rab11al	99	79.535	Monopterus_albus
ENSGAGG00000020702	-	99	80.465	ENSNBRG00000005116	rab11al	99	80.465	Neolamprologus_brichardi
ENSGAGG00000020702	-	99	80.000	ENSONIG00000002281	rab11al	99	80.000	Oreochromis_niloticus
ENSGAGG00000020702	-	99	80.465	ENSORLG00000016126	rab11al	99	80.465	Oryzias_latipes
ENSGAGG00000020702	-	99	80.465	ENSORLG00020013747	rab11al	99	80.465	Oryzias_latipes_hni
ENSGAGG00000020702	-	99	80.465	ENSORLG00015019591	rab11al	99	80.465	Oryzias_latipes_hsok
ENSGAGG00000020702	-	99	80.841	ENSOMEG00000020271	rab11al	99	80.841	Oryzias_melastigma
ENSGAGG00000020702	-	99	79.907	ENSPKIG00000020893	rab11al	99	79.907	Paramormyrops_kingsleyae
ENSGAGG00000020702	-	100	97.222	ENSPSIG00000013143	-	100	97.222	Pelodiscus_sinensis
ENSGAGG00000020702	-	99	80.374	ENSPMGG00000004220	rab11al	89	93.284	Periophthalmus_magnuspinnatus
ENSGAGG00000020702	-	99	82.326	ENSPFOG00000011316	rab11al	99	82.326	Poecilia_formosa
ENSGAGG00000020702	-	99	82.326	ENSPLAG00000007986	rab11al	99	82.326	Poecilia_latipinna
ENSGAGG00000020702	-	99	82.326	ENSPMEG00000000804	rab11al	99	82.326	Poecilia_mexicana
ENSGAGG00000020702	-	99	82.326	ENSPREG00000017324	rab11al	99	82.326	Poecilia_reticulata
ENSGAGG00000020702	-	99	80.465	ENSPNYG00000018244	rab11al	99	80.465	Pundamilia_nyererei
ENSGAGG00000020702	-	99	81.395	ENSPNAG00000029085	rab11al	99	81.395	Pygocentrus_nattereri
ENSGAGG00000020702	-	99	80.374	ENSSFOG00015008618	rab11al	99	80.374	Scleropages_formosus
ENSGAGG00000020702	-	99	80.000	ENSSMAG00000016206	rab11al	99	80.000	Scophthalmus_maximus
ENSGAGG00000020702	-	99	80.000	ENSSDUG00000006278	rab11al	99	80.000	Seriola_dumerili
ENSGAGG00000020702	-	99	80.000	ENSSLDG00000012116	rab11al	99	80.000	Seriola_lalandi_dorsalis
ENSGAGG00000020702	-	100	88.018	ENSSPUG00000002526	-	100	88.018	Sphenodon_punctatus
ENSGAGG00000020702	-	99	80.000	ENSSPAG00000012044	rab11al	99	80.000	Stegastes_partitus
ENSGAGG00000020702	-	94	93.103	ENSTGUG00000003680	-	100	93.103	Taeniopygia_guttata
ENSGAGG00000020702	-	98	80.189	ENSTRUG00000007556	rab11al	94	91.034	Takifugu_rubripes
ENSGAGG00000020702	-	99	81.860	ENSXCOG00000004226	rab11al	99	81.860	Xiphophorus_couchianus
ENSGAGG00000020702	-	99	81.860	ENSXMAG00000027071	rab11al	99	81.860	Xiphophorus_maculatus