EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000020760 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 4925 bases
Position: chrPPEB01001261.1:225638-230562
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000028643	zf-C2H2	PF00096.26	3.2e-27	1	4
ENSGAGP00000028643	zf-C2H2	PF00096.26	3.2e-27	2	4
ENSGAGP00000028643	zf-C2H2	PF00096.26	3.2e-27	3	4
ENSGAGP00000028643	zf-C2H2	PF00096.26	3.2e-27	4	4
ENSGAGP00000028643	zf-met	PF12874.7	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000032535	-	780	-	ENSGAGP00000028643	259 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000020760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000020760	-	86	42.735	ENSGAGG00000022705	SNAI1	55	56.522
ENSGAGG00000020760	-	89	44.444	ENSGAGG00000000426	SNAI2	91	44.856
ENSGAGG00000020760	-	79	70.561	ENSGAGG00000011736	SCRT1	78	70.561
ENSGAGG00000020760	-	72	92.500	ENSGAGG00000020761	SCRT2	72	92.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000020760	-	68	81.356	ENSAPOG00000015197	-	64	80.791	Acanthochromis_polyacanthus
ENSGAGG00000020760	-	74	76.166	ENSAPOG00000003680	scrt2	67	75.648	Acanthochromis_polyacanthus
ENSGAGG00000020760	-	68	82.386	ENSAPOG00000009279	scrt1b	63	82.386	Acanthochromis_polyacanthus
ENSGAGG00000020760	-	68	80.682	ENSACIG00000013613	scrt1b	63	80.682	Amphilophus_citrinellus
ENSGAGG00000020760	-	74	75.648	ENSACIG00000012604	scrt2	66	75.130	Amphilophus_citrinellus
ENSGAGG00000020760	-	68	81.356	ENSACIG00000006586	-	59	80.791	Amphilophus_citrinellus
ENSGAGG00000020760	-	74	68.687	ENSACIG00000001296	-	64	68.182	Amphilophus_citrinellus
ENSGAGG00000020760	-	68	81.356	ENSAOCG00000023304	-	59	80.791	Amphiprion_ocellaris
ENSGAGG00000020760	-	71	80.000	ENSAOCG00000003910	scrt1b	65	80.000	Amphiprion_ocellaris
ENSGAGG00000020760	-	74	76.166	ENSAOCG00000021557	scrt2	67	75.648	Amphiprion_ocellaris
ENSGAGG00000020760	-	71	80.000	ENSAPEG00000000869	scrt1b	65	80.000	Amphiprion_percula
ENSGAGG00000020760	-	68	81.356	ENSAPEG00000005677	-	59	80.791	Amphiprion_percula
ENSGAGG00000020760	-	74	76.166	ENSAPEG00000022558	scrt2	67	75.648	Amphiprion_percula
ENSGAGG00000020760	-	68	81.818	ENSATEG00000002302	scrt1b	63	81.818	Anabas_testudineus
ENSGAGG00000020760	-	70	79.670	ENSATEG00000011660	-	67	79.121	Anabas_testudineus
ENSGAGG00000020760	-	74	74.408	ENSATEG00000023998	scrt2	66	73.934	Anabas_testudineus
ENSGAGG00000020760	-	72	87.500	ENSACAG00000016109	SCRT2	91	87.500	Anolis_carolinensis
ENSGAGG00000020760	-	71	79.459	ENSACLG00000007162	scrt1b	65	79.459	Astatotilapia_calliptera
ENSGAGG00000020760	-	81	71.226	ENSACLG00000012046	-	68	70.755	Astatotilapia_calliptera
ENSGAGG00000020760	-	68	80.114	ENSAMXG00000042624	SCRT1	63	80.114	Astyanax_mexicanus
ENSGAGG00000020760	-	74	78.866	ENSAMXG00000034158	scrt2	70	78.866	Astyanax_mexicanus
ENSGAGG00000020760	-	81	68.919	ENSAMXG00000038085	scrt1a	80	68.584	Astyanax_mexicanus
ENSGAGG00000020760	-	62	59.146	WBGene00000468	ces-1	51	66.423	Caenorhabditis_elegans
ENSGAGG00000020760	-	58	89.571	ENSCPBG00000027613	SCRT2	67	89.571	Chrysemys_picta_bellii
ENSGAGG00000020760	-	79	70.093	ENSCPBG00000018899	SCRT1	77	70.093	Chrysemys_picta_bellii
ENSGAGG00000020760	-	71	74.627	ENSCSEG00000021542	scrt2	64	71.642	Cynoglossus_semilaevis
ENSGAGG00000020760	-	68	81.921	ENSCSEG00000014892	-	59	80.791	Cynoglossus_semilaevis
ENSGAGG00000020760	-	68	82.386	ENSCSEG00000008596	scrt1b	63	82.386	Cynoglossus_semilaevis
ENSGAGG00000020760	-	71	79.459	ENSCVAG00000009561	scrt1b	65	79.459	Cyprinodon_variegatus
ENSGAGG00000020760	-	74	72.512	ENSCVAG00000021038	scrt2	66	72.512	Cyprinodon_variegatus
ENSGAGG00000020760	-	68	81.921	ENSCVAG00000003190	-	59	81.356	Cyprinodon_variegatus
ENSGAGG00000020760	-	68	82.386	ENSDARG00000040214	scrt1b	63	82.386	Danio_rerio
ENSGAGG00000020760	-	71	80.328	ENSDARG00000100821	scrt1a	66	80.328	Danio_rerio
ENSGAGG00000020760	-	71	79.235	ENSELUG00000022228	scrt1a	66	79.235	Esox_lucius
ENSGAGG00000020760	-	71	78.689	ENSELUG00000005435	scrt1b	65	78.689	Esox_lucius
ENSGAGG00000020760	-	73	71.028	ENSELUG00000023883	scrt2	65	72.906	Esox_lucius
ENSGAGG00000020760	-	72	88.060	ENSFALG00000005718	SCRT2	90	83.028	Ficedula_albicollis
ENSGAGG00000020760	-	57	83.784	ENSFDAG00000008733	SCRT1	67	83.784	Fukomys_damarensis
ENSGAGG00000020760	-	68	81.356	ENSFHEG00000009794	-	59	80.791	Fundulus_heteroclitus
ENSGAGG00000020760	-	71	79.459	ENSFHEG00000014820	scrt1b	65	79.459	Fundulus_heteroclitus
ENSGAGG00000020760	-	74	79.275	ENSFHEG00000005732	scrt2	69	78.756	Fundulus_heteroclitus
ENSGAGG00000020760	-	68	82.386	ENSGMOG00000000629	scrt1b	64	82.386	Gadus_morhua
ENSGAGG00000020760	-	72	88.500	ENSGALG00000028912	SCRT2	77	83.410	Gallus_gallus
ENSGAGG00000020760	-	74	72.986	ENSGAFG00000003093	scrt2	69	72.986	Gambusia_affinis
ENSGAGG00000020760	-	71	79.459	ENSGAFG00000007636	scrt1b	65	79.459	Gambusia_affinis
ENSGAGG00000020760	-	68	81.921	ENSGAFG00000009650	-	66	81.356	Gambusia_affinis
ENSGAGG00000020760	-	71	80.000	ENSGACG00000008982	scrt1b	67	80.000	Gasterosteus_aculeatus
ENSGAGG00000020760	-	68	80.791	ENSGACG00000004072	-	60	80.226	Gasterosteus_aculeatus
ENSGAGG00000020760	-	71	79.459	ENSHBUG00000016621	scrt1b	65	79.459	Haplochromis_burtoni
ENSGAGG00000020760	-	68	81.921	ENSHBUG00000019101	-	59	81.356	Haplochromis_burtoni
ENSGAGG00000020760	-	71	78.689	ENSHBUG00000012492	scrt2	63	78.142	Haplochromis_burtoni
ENSGAGG00000020760	-	71	74.752	ENSHCOG00000008116	scrt2	68	74.257	Hippocampus_comes
ENSGAGG00000020760	-	71	79.459	ENSHCOG00000016704	scrt1b	65	79.459	Hippocampus_comes
ENSGAGG00000020760	-	70	78.191	ENSHCOG00000016179	-	67	77.128	Hippocampus_comes
ENSGAGG00000020760	-	71	77.717	ENSIPUG00000005547	-	69	77.717	Ictalurus_punctatus
ENSGAGG00000020760	-	68	82.386	ENSIPUG00000004551	scrt1a	63	82.386	Ictalurus_punctatus
ENSGAGG00000020760	-	55	87.324	ENSSTOG00000032944	SCRT2	77	86.806	Ictidomys_tridecemlineatus
ENSGAGG00000020760	-	74	72.512	ENSKMAG00000018087	scrt2	66	70.142	Kryptolebias_marmoratus
ENSGAGG00000020760	-	71	79.459	ENSKMAG00000005484	scrt1b	65	79.459	Kryptolebias_marmoratus
ENSGAGG00000020760	-	68	81.006	ENSKMAG00000009489	-	60	80.447	Kryptolebias_marmoratus
ENSGAGG00000020760	-	80	73.558	ENSLBEG00000023388	-	68	73.558	Labrus_bergylta
ENSGAGG00000020760	-	74	72.642	ENSLBEG00000015419	scrt2	66	72.170	Labrus_bergylta
ENSGAGG00000020760	-	68	82.386	ENSLACG00000003588	SCRT1	63	82.386	Latimeria_chalumnae
ENSGAGG00000020760	-	68	82.386	ENSLOCG00000007573	scrt1b	63	82.386	Lepisosteus_oculatus
ENSGAGG00000020760	-	52	88.148	ENSMFAG00000035496	SCRT1	66	85.915	Macaca_fascicularis
ENSGAGG00000020760	-	74	72.512	ENSMAMG00000001291	scrt2	66	72.512	Mastacembelus_armatus
ENSGAGG00000020760	-	68	81.818	ENSMAMG00000011698	scrt1b	63	81.818	Mastacembelus_armatus
ENSGAGG00000020760	-	71	79.459	ENSMZEG00005005627	scrt1b	65	79.459	Maylandia_zebra
ENSGAGG00000020760	-	68	81.921	ENSMZEG00005026702	-	59	81.356	Maylandia_zebra
ENSGAGG00000020760	-	71	78.689	ENSMZEG00005026445	scrt2	63	78.142	Maylandia_zebra
ENSGAGG00000020760	-	72	88.500	ENSMGAG00000016579	SCRT2	90	83.410	Meleagris_gallopavo
ENSGAGG00000020760	-	68	81.250	ENSMMOG00000018345	-	59	81.250	Mola_mola
ENSGAGG00000020760	-	71	76.768	ENSMMOG00000009272	scrt2	63	74.747	Mola_mola
ENSGAGG00000020760	-	68	81.818	ENSMMOG00000003327	scrt1b	63	81.818	Mola_mola
ENSGAGG00000020760	-	74	77.202	ENSMALG00000013656	scrt2	66	76.684	Monopterus_albus
ENSGAGG00000020760	-	68	81.818	ENSMALG00000012704	scrt1b	63	81.818	Monopterus_albus
ENSGAGG00000020760	-	58	84.000	ENSNGAG00000020815	Scrt2	70	86.806	Nannospalax_galili
ENSGAGG00000020760	-	74	75.648	ENSNBRG00000007221	scrt2	67	75.130	Neolamprologus_brichardi
ENSGAGG00000020760	-	68	81.921	ENSNBRG00000014882	-	59	81.356	Neolamprologus_brichardi
ENSGAGG00000020760	-	71	79.459	ENSNBRG00000013983	scrt1b	65	79.459	Neolamprologus_brichardi
ENSGAGG00000020760	-	68	81.921	ENSONIG00000019809	-	58	81.356	Oreochromis_niloticus
ENSGAGG00000020760	-	71	78.378	ENSONIG00000006007	scrt1b	65	78.378	Oreochromis_niloticus
ENSGAGG00000020760	-	73	70.833	ENSONIG00000003152	-	68	70.833	Oreochromis_niloticus
ENSGAGG00000020760	-	74	72.512	ENSONIG00000016758	scrt2	66	69.668	Oreochromis_niloticus
ENSGAGG00000020760	-	81	71.698	ENSORLG00000022825	-	68	71.698	Oryzias_latipes
ENSGAGG00000020760	-	74	72.986	ENSORLG00000024051	scrt2	66	72.986	Oryzias_latipes
ENSGAGG00000020760	-	68	81.818	ENSORLG00000025651	scrt1b	63	81.818	Oryzias_latipes
ENSGAGG00000020760	-	74	72.986	ENSORLG00020011478	scrt2	66	72.986	Oryzias_latipes_hni
ENSGAGG00000020760	-	68	81.818	ENSORLG00020012967	scrt1b	63	81.818	Oryzias_latipes_hni
ENSGAGG00000020760	-	68	81.818	ENSORLG00015019165	scrt1b	63	81.818	Oryzias_latipes_hsok
ENSGAGG00000020760	-	81	71.226	ENSORLG00015010104	-	68	71.226	Oryzias_latipes_hsok
ENSGAGG00000020760	-	74	72.986	ENSORLG00015005524	scrt2	66	72.986	Oryzias_latipes_hsok
ENSGAGG00000020760	-	74	72.986	ENSOMEG00000002661	scrt2	66	70.142	Oryzias_melastigma
ENSGAGG00000020760	-	81	71.560	ENSOMEG00000000286	-	73	70.642	Oryzias_melastigma
ENSGAGG00000020760	-	68	81.818	ENSOMEG00000003925	scrt1b	63	81.818	Oryzias_melastigma
ENSGAGG00000020760	-	69	80.899	ENSPKIG00000022303	SCRT1	66	78.378	Paramormyrops_kingsleyae
ENSGAGG00000020760	-	71	79.781	ENSPKIG00000020085	scrt1a	66	79.781	Paramormyrops_kingsleyae
ENSGAGG00000020760	-	75	76.166	ENSPMGG00000002260	scrt1b	70	76.166	Periophthalmus_magnuspinnatus
ENSGAGG00000020760	-	74	78.866	ENSPMGG00000016561	scrt2	68	78.351	Periophthalmus_magnuspinnatus
ENSGAGG00000020760	-	68	81.818	ENSPMGG00000021402	-	60	81.818	Periophthalmus_magnuspinnatus
ENSGAGG00000020760	-	71	79.459	ENSPFOG00000017719	scrt1b	65	79.459	Poecilia_formosa
ENSGAGG00000020760	-	74	72.986	ENSPFOG00000007738	scrt2	66	72.986	Poecilia_formosa
ENSGAGG00000020760	-	68	81.921	ENSPFOG00000005616	-	60	81.356	Poecilia_formosa
ENSGAGG00000020760	-	68	81.921	ENSPLAG00000011718	-	60	81.356	Poecilia_latipinna
ENSGAGG00000020760	-	71	79.459	ENSPLAG00000009876	scrt1b	65	79.459	Poecilia_latipinna
ENSGAGG00000020760	-	74	78.866	ENSPLAG00000005765	scrt2	68	78.351	Poecilia_latipinna
ENSGAGG00000020760	-	74	78.866	ENSPMEG00000001538	scrt2	68	78.351	Poecilia_mexicana
ENSGAGG00000020760	-	68	81.921	ENSPMEG00000011706	-	60	81.356	Poecilia_mexicana
ENSGAGG00000020760	-	71	79.459	ENSPMEG00000013274	scrt1b	65	79.459	Poecilia_mexicana
ENSGAGG00000020760	-	74	72.986	ENSPREG00000001147	scrt2	66	72.986	Poecilia_reticulata
ENSGAGG00000020760	-	71	79.459	ENSPREG00000018985	scrt1b	65	79.459	Poecilia_reticulata
ENSGAGG00000020760	-	68	81.921	ENSPREG00000012166	-	60	81.356	Poecilia_reticulata
ENSGAGG00000020760	-	71	78.689	ENSPNYG00000013109	scrt2	63	78.142	Pundamilia_nyererei
ENSGAGG00000020760	-	71	79.459	ENSPNYG00000017733	scrt1b	65	79.459	Pundamilia_nyererei
ENSGAGG00000020760	-	68	81.921	ENSPNYG00000008865	-	59	81.356	Pundamilia_nyererei
ENSGAGG00000020760	-	68	80.682	ENSPNAG00000027880	-	64	80.682	Pygocentrus_nattereri
ENSGAGG00000020760	-	68	82.386	ENSPNAG00000017415	scrt1a	63	82.386	Pygocentrus_nattereri
ENSGAGG00000020760	-	71	79.459	ENSSFOG00015001195	SCRT1	66	79.459	Scleropages_formosus
ENSGAGG00000020760	-	71	80.000	ENSSMAG00000019207	scrt1b	65	80.000	Scophthalmus_maximus
ENSGAGG00000020760	-	81	70.755	ENSSMAG00000005122	-	68	70.283	Scophthalmus_maximus
ENSGAGG00000020760	-	70	75.879	ENSSDUG00000001637	scrt2	65	72.362	Seriola_dumerili
ENSGAGG00000020760	-	68	81.921	ENSSDUG00000013215	-	59	81.356	Seriola_dumerili
ENSGAGG00000020760	-	71	79.459	ENSSDUG00000007752	scrt1b	65	79.459	Seriola_dumerili
ENSGAGG00000020760	-	71	79.459	ENSSLDG00000017166	scrt1b	65	79.459	Seriola_lalandi_dorsalis
ENSGAGG00000020760	-	74	73.460	ENSSLDG00000013565	scrt2	66	70.142	Seriola_lalandi_dorsalis
ENSGAGG00000020760	-	68	81.921	ENSSLDG00000016454	-	59	81.356	Seriola_lalandi_dorsalis
ENSGAGG00000020760	-	92	76.371	ENSSPUG00000018637	SCRT2	78	83.099	Sphenodon_punctatus
ENSGAGG00000020760	-	68	81.356	ENSSPAG00000006788	-	59	80.791	Stegastes_partitus
ENSGAGG00000020760	-	74	76.684	ENSSPAG00000014018	scrt2	67	76.166	Stegastes_partitus
ENSGAGG00000020760	-	71	79.459	ENSSPAG00000002200	scrt1b	65	79.459	Stegastes_partitus
ENSGAGG00000020760	-	76	84.286	ENSTGUG00000006801	SCRT2	90	84.286	Taeniopygia_guttata
ENSGAGG00000020760	-	71	80.435	ENSTRUG00000012719	-	61	80.435	Takifugu_rubripes
ENSGAGG00000020760	-	68	82.386	ENSTRUG00000011637	scrt1b	64	82.386	Takifugu_rubripes
ENSGAGG00000020760	-	89	67.094	ENSTRUG00000019558	-	83	67.094	Takifugu_rubripes
ENSGAGG00000020760	-	71	76.768	ENSTRUG00000007620	scrt2	66	73.737	Takifugu_rubripes
ENSGAGG00000020760	-	71	81.720	ENSTNIG00000012473	scrt2	65	81.183	Tetraodon_nigroviridis
ENSGAGG00000020760	-	68	82.386	ENSTNIG00000018384	scrt1b	63	82.386	Tetraodon_nigroviridis
ENSGAGG00000020760	-	71	79.459	ENSXCOG00000019675	scrt1b	65	79.459	Xiphophorus_couchianus
ENSGAGG00000020760	-	74	72.986	ENSXCOG00000014367	scrt2	69	72.986	Xiphophorus_couchianus
ENSGAGG00000020760	-	68	81.921	ENSXCOG00000019861	-	66	81.356	Xiphophorus_couchianus
ENSGAGG00000020760	-	68	81.921	ENSXMAG00000015353	-	60	81.356	Xiphophorus_maculatus
ENSGAGG00000020760	-	74	72.986	ENSXMAG00000028567	scrt2	66	72.986	Xiphophorus_maculatus
ENSGAGG00000020760	-	71	79.459	ENSXMAG00000027885	scrt1b	65	79.459	Xiphophorus_maculatus