EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGAGG00000020785 (Gene tree)
Gene ID
-
Gene Symbol
SPEN
Alias
KIAA0929|MINT|RBM15C|SHARP
Full Name
spen family transcriptional repressor
Gene Type
protein_coding
Species
Gopherus_agassizii
Status
putative
Strand
Minus strand
Length
94230 bases
Position
chrPPEB01000559.1:340280-434509
Accession
17575
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAGP00000028675RRM_5PF13893.61.3e-0711
ENSGAGP00000028680RRM_5PF13893.62.3e-0611
ENSGAGP00000028675RRM_1PF00076.224.8e-4414
ENSGAGP00000028675RRM_1PF00076.224.8e-4424
ENSGAGP00000028675RRM_1PF00076.224.8e-4434
ENSGAGP00000028675RRM_1PF00076.224.8e-4444
ENSGAGP00000028676RRM_1PF00076.225.7e-3613
ENSGAGP00000028676RRM_1PF00076.225.7e-3623
ENSGAGP00000028676RRM_1PF00076.225.7e-3633
ENSGAGP00000028677RRM_1PF00076.223.3e-3313
ENSGAGP00000028677RRM_1PF00076.223.3e-3323
ENSGAGP00000028677RRM_1PF00076.223.3e-3333
ENSGAGP00000028680RRM_1PF00076.223.8e-3013
ENSGAGP00000028680RRM_1PF00076.223.8e-3023
ENSGAGP00000028680RRM_1PF00076.223.8e-3033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAGT00000032575SPEN-20410755-ENSGAGP000000286803497 (aa)--
ENSGAGT00000032570SPEN-20111063-ENSGAGP000000286753560 (aa)--
ENSGAGT00000032571SPEN-20210949-ENSGAGP000000286763522 (aa)--
ENSGAGT00000032572SPEN-20310835-ENSGAGP000000286773484 (aa)--
Gene Model
Click here to download ENSGAGG00000020785's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000020785's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAGG00000020785SPEN10072.841ENSG00000065526SPEN9996.633Homo_sapiens
ENSGAGG00000020785SPEN9981.461ENSAPOG00000009853-9174.532Acanthochromis_polyacanthus
ENSGAGG00000020785SPEN9080.000ENSAPOG00000011411si:ch1073-335m2.29480.000Acanthochromis_polyacanthus
ENSGAGG00000020785SPEN10097.065ENSAMEG00000011817SPEN9797.065Ailuropoda_melanoleuca
ENSGAGG00000020785SPEN9981.461ENSAOCG00000014505-10048.621Amphiprion_ocellaris
ENSGAGG00000020785SPEN6178.519ENSAOCG00000008077si:ch1073-335m2.26987.634Amphiprion_ocellaris
ENSGAGG00000020785SPEN9981.461ENSAPEG00000010288-10048.506Amphiprion_percula
ENSGAGG00000020785SPEN7084.211ENSAPEG00000013515si:ch1073-335m2.27384.211Amphiprion_percula
ENSGAGG00000020785SPEN9982.584ENSATEG00000005627-10048.722Anabas_testudineus
ENSGAGG00000020785SPEN8885.207ENSATEG00000007674si:ch1073-335m2.29585.207Anabas_testudineus
ENSGAGG00000020785SPEN9996.502ENSAPLG00000012618SPEN9996.502Anas_platyrhynchos
ENSGAGG00000020785SPEN9988.000ENSACAG00000013761SPEN9988.400Anolis_carolinensis
ENSGAGG00000020785SPEN9971.815ENSANAG00000034428SPEN9794.455Aotus_nancymaae
ENSGAGG00000020785SPEN6883.626ENSACLG00000021433si:ch1073-335m2.27383.626Astatotilapia_calliptera
ENSGAGG00000020785SPEN9981.461ENSACLG00000016922-10048.083Astatotilapia_calliptera
ENSGAGG00000020785SPEN9583.240ENSAMXG00000012485spen9972.968Astyanax_mexicanus
ENSGAGG00000020785SPEN10071.086ENSBTAG00000018729SPEN9796.869Bos_taurus
ENSGAGG00000020785SPEN10072.321ENSCJAG00000008527SPEN9797.456Callithrix_jacchus
ENSGAGG00000020785SPEN8697.456ENSCAFG00000016132-9297.456Canis_familiaris
ENSGAGG00000020785SPEN10097.065ENSCHIG00000025070SPEN9797.065Capra_hircus
ENSGAGG00000020785SPEN9368.539ENSTSYG00000036016SPEN9694.660Carlito_syrichta
ENSGAGG00000020785SPEN9967.687ENSCAPG00000013803SPEN9996.488Cavia_aperea
ENSGAGG00000020785SPEN9966.345ENSCPOG00000014036SPEN9996.488Cavia_porcellus
ENSGAGG00000020785SPEN10067.321ENSCCAG00000020258SPEN9696.296Cebus_capucinus
ENSGAGG00000020785SPEN9599.259ENSCATG00000015079SPEN9798.529Cercocebus_atys
ENSGAGG00000020785SPEN9967.893ENSCLAG00000002018SPEN9996.694Chinchilla_lanigera
ENSGAGG00000020785SPEN10072.932ENSCSAG00000000841SPEN9797.456Chlorocebus_sabaeus
ENSGAGG00000020785SPEN10096.472ENSCPBG00000010477SPEN10096.472Chrysemys_picta_bellii
ENSGAGG00000020785SPEN9971.183ENSCANG00000034547SPEN9771.183Colobus_angolensis_palliatus
ENSGAGG00000020785SPEN9996.282ENSCGRG00001007725Spen9796.282Cricetulus_griseus_chok1gshd
ENSGAGG00000020785SPEN9993.168ENSCGRG00000010581Spen9792.133Cricetulus_griseus_crigri
ENSGAGG00000020785SPEN9984.270ENSCSEG00000003915-10047.998Cynoglossus_semilaevis
ENSGAGG00000020785SPEN9585.380ENSCVAG00000009075si:ch1073-335m2.29985.380Cyprinodon_variegatus
ENSGAGG00000020785SPEN10046.730ENSCVAG00000016346-10047.361Cyprinodon_variegatus
ENSGAGG00000020785SPEN6981.609ENSDARG00000074332si:ch1073-335m2.27181.609Danio_rerio
ENSGAGG00000020785SPEN10048.187ENSDARG00000074245spen10088.889Danio_rerio
ENSGAGG00000020785SPEN10073.422ENSDNOG00000041948SPEN9796.304Dasypus_novemcinctus
ENSGAGG00000020785SPEN9967.089ENSDORG00000023909Spen10064.979Dipodomys_ordii
ENSGAGG00000020785SPEN6696.639ENSETEG00000016692-6796.653Echinops_telfairi
ENSGAGG00000020785SPEN9599.259ENSEASG00005015911SPEN9699.259Equus_asinus_asinus
ENSGAGG00000020785SPEN9699.259ENSECAG00000008833SPEN9799.259Equus_caballus
ENSGAGG00000020785SPEN7095.349ENSEEUG00000010255SPEN7595.349Erinaceus_europaeus
ENSGAGG00000020785SPEN8384.483ENSELUG00000007726si:ch1073-335m2.29584.483Esox_lucius
ENSGAGG00000020785SPEN9085.372ENSFALG00000003551SPEN9997.222Ficedula_albicollis
ENSGAGG00000020785SPEN9969.151ENSFDAG00000010212SPEN9796.451Fukomys_damarensis
ENSGAGG00000020785SPEN6374.510ENSFHEG00000004544si:ch1073-335m2.25674.510Fundulus_heteroclitus
ENSGAGG00000020785SPEN7081.006ENSGMOG00000008156si:ch1073-335m2.27281.006Gadus_morhua
ENSGAGG00000020785SPEN9348.490ENSGMOG00000008397-9972.904Gadus_morhua
ENSGAGG00000020785SPEN10099.217ENSGALG00000036932SPEN9999.217Gallus_gallus
ENSGAGG00000020785SPEN10046.748ENSGAFG00000015819-9173.783Gambusia_affinis
ENSGAGG00000020785SPEN6584.615ENSGAFG00000021570si:ch1073-335m2.27084.615Gambusia_affinis
ENSGAGG00000020785SPEN8980.000ENSGACG00000001176si:ch1073-335m2.29180.000Gasterosteus_aculeatus
ENSGAGG00000020785SPEN10048.076ENSGACG00000005341-10048.005Gasterosteus_aculeatus
ENSGAGG00000020785SPEN10072.721ENSGGOG00000012041SPEN9797.456Gorilla_gorilla
ENSGAGG00000020785SPEN6883.626ENSHBUG00000023253si:ch1073-335m2.29483.626Haplochromis_burtoni
ENSGAGG00000020785SPEN9981.461ENSHBUG00000020626-9974.377Haplochromis_burtoni
ENSGAGG00000020785SPEN8396.680ENSHGLG00000019259SPEN7196.680Heterocephalus_glaber_female
ENSGAGG00000020785SPEN7696.033ENSHGLG00100019294SPEN8296.033Heterocephalus_glaber_male
ENSGAGG00000020785SPEN8766.471ENSHCOG00000006004si:ch1073-335m2.29581.250Hippocampus_comes
ENSGAGG00000020785SPEN9478.736ENSIPUG00000018212si:ch1073-335m2.29978.736Ictalurus_punctatus
ENSGAGG00000020785SPEN9982.778ENSIPUG00000021668spen9881.967Ictalurus_punctatus
ENSGAGG00000020785SPEN9897.291ENSSTOG00000021428SPEN9797.291Ictidomys_tridecemlineatus
ENSGAGG00000020785SPEN10096.086ENSJJAG00000010882Spen9996.086Jaculus_jaculus
ENSGAGG00000020785SPEN5484.211ENSKMAG00000021725si:ch1073-335m2.25684.211Kryptolebias_marmoratus
ENSGAGG00000020785SPEN9980.899ENSKMAG00000003882-10047.560Kryptolebias_marmoratus
ENSGAGG00000020785SPEN8743.492ENSLBEG00000019129-10043.490Labrus_bergylta
ENSGAGG00000020785SPEN6681.065ENSLBEG00000020855si:ch1073-335m2.27081.065Labrus_bergylta
ENSGAGG00000020785SPEN9781.132ENSLACG00000003258SPEN9995.108Latimeria_chalumnae
ENSGAGG00000020785SPEN10078.278ENSLOCG00000007896si:ch1073-335m2.210078.278Lepisosteus_oculatus
ENSGAGG00000020785SPEN9996.914ENSLAFG00000004524SPEN9696.914Loxodonta_africana
ENSGAGG00000020785SPEN10072.969ENSMFAG00000041974SPEN9797.456Macaca_fascicularis
ENSGAGG00000020785SPEN10073.006ENSMMUG00000008026SPEN9797.456Macaca_mulatta
ENSGAGG00000020785SPEN10073.043ENSMNEG00000042402SPEN9797.456Macaca_nemestrina
ENSGAGG00000020785SPEN10072.194ENSMLEG00000039293SPEN9793.542Mandrillus_leucophaeus
ENSGAGG00000020785SPEN7084.431ENSMAMG00000023870si:ch1073-335m2.27384.431Mastacembelus_armatus
ENSGAGG00000020785SPEN9245.747ENSMZEG00005021491-9945.904Maylandia_zebra
ENSGAGG00000020785SPEN6883.626ENSMZEG00005011762si:ch1073-335m2.27383.626Maylandia_zebra
ENSGAGG00000020785SPEN8074.545ENSMAUG00000008318Spen8196.673Mesocricetus_auratus
ENSGAGG00000020785SPEN10072.737ENSMICG00000030994SPEN9797.456Microcebus_murinus
ENSGAGG00000020785SPEN10095.890ENSMOCG00000016083Spen9795.890Microtus_ochrogaster
ENSGAGG00000020785SPEN6583.626ENSMMOG00000021742si:ch1073-335m2.25983.626Mola_mola
ENSGAGG00000020785SPEN10096.680ENSMODG00000003411SPEN9996.680Monodelphis_domestica
ENSGAGG00000020785SPEN9982.022ENSMALG00000008625-10048.659Monopterus_albus
ENSGAGG00000020785SPEN9965.902MGP_CAROLIEiJ_G0026745Spen9765.791Mus_caroli
ENSGAGG00000020785SPEN10094.152ENSMUSG00000040761Spen9894.737Mus_musculus
ENSGAGG00000020785SPEN10095.695MGP_PahariEiJ_G0029076Spen9795.695Mus_pahari
ENSGAGG00000020785SPEN10065.757MGP_SPRETEiJ_G0027724Spen9865.721Mus_spretus
ENSGAGG00000020785SPEN9872.224ENSMPUG00000016317SPEN9796.614Mustela_putorius_furo
ENSGAGG00000020785SPEN9294.624ENSMLUG00000010144SPEN9992.424Myotis_lucifugus
ENSGAGG00000020785SPEN9697.065ENSNGAG00000000641Spen9997.065Nannospalax_galili
ENSGAGG00000020785SPEN8843.453ENSNBRG00000022090-10043.694Neolamprologus_brichardi
ENSGAGG00000020785SPEN7183.626ENSNBRG00000005733si:ch1073-335m2.29483.626Neolamprologus_brichardi
ENSGAGG00000020785SPEN9972.531ENSNLEG00000007652SPEN9797.119Nomascus_leucogenys
ENSGAGG00000020785SPEN9092.708ENSMEUG00000002422SPEN9192.708Notamacropus_eugenii
ENSGAGG00000020785SPEN9182.724ENSOPRG00000015800SPEN9082.724Ochotona_princeps
ENSGAGG00000020785SPEN10067.722ENSODEG00000016644SPEN9989.258Octodon_degus
ENSGAGG00000020785SPEN10048.817ENSONIG00000006573-9981.636Oreochromis_niloticus
ENSGAGG00000020785SPEN9966.888ENSOCUG00000010840SPEN9766.888Oryctolagus_cuniculus
ENSGAGG00000020785SPEN9041.116ENSORLG00000028894-10041.325Oryzias_latipes
ENSGAGG00000020785SPEN8580.226ENSORLG00020009351si:ch1073-335m2.29180.226Oryzias_latipes_hni
ENSGAGG00000020785SPEN9041.274ENSORLG00020007735-10041.486Oryzias_latipes_hni
ENSGAGG00000020785SPEN9454.572ENSORLG00015022085-10044.621Oryzias_latipes_hsok
ENSGAGG00000020785SPEN8365.237ENSORLG00015005537si:ch1073-335m2.29179.661Oryzias_latipes_hsok
ENSGAGG00000020785SPEN10044.085ENSOMEG00000007639-10044.313Oryzias_melastigma
ENSGAGG00000020785SPEN7974.194ENSOMEG00000004509si:ch1073-335m2.28974.194Oryzias_melastigma
ENSGAGG00000020785SPEN9997.847ENSOGAG00000025110SPEN9797.847Otolemur_garnettii
ENSGAGG00000020785SPEN9993.886ENSOARG00000008477SPEN9893.886Ovis_aries
ENSGAGG00000020785SPEN9972.697ENSPPAG00000035690SPEN9797.308Pan_paniscus
ENSGAGG00000020785SPEN10072.979ENSPTRG00000000210SPEN9797.456Pan_troglodytes
ENSGAGG00000020785SPEN10071.935ENSPANG00000006293SPEN9771.972Papio_anubis
ENSGAGG00000020785SPEN97100.000ENSPKIG00000010492si:ch1073-335m2.2100100.000Paramormyrops_kingsleyae
ENSGAGG00000020785SPEN9179.428ENSPKIG00000002617SPEN9979.606Paramormyrops_kingsleyae
ENSGAGG00000020785SPEN9994.008ENSPSIG00000008026SPEN9994.008Pelodiscus_sinensis
ENSGAGG00000020785SPEN9996.025ENSPEMG00000022997Spen9796.025Peromyscus_maniculatus_bairdii
ENSGAGG00000020785SPEN6585.799ENSPFOG00000017986si:ch1073-335m2.29085.799Poecilia_formosa
ENSGAGG00000020785SPEN9285.799ENSPLAG00000016625si:ch1073-335m2.29185.799Poecilia_latipinna
ENSGAGG00000020785SPEN10047.434ENSPMEG00000006764-9173.408Poecilia_mexicana
ENSGAGG00000020785SPEN6185.799ENSPMEG00000002674si:ch1073-335m2.28685.799Poecilia_mexicana
ENSGAGG00000020785SPEN10047.238ENSPREG00000010399-9173.783Poecilia_reticulata
ENSGAGG00000020785SPEN6585.799ENSPREG00000005357si:ch1073-335m2.29085.799Poecilia_reticulata
ENSGAGG00000020785SPEN10073.053ENSPPYG00000001834SPEN9797.456Pongo_abelii
ENSGAGG00000020785SPEN9076.868ENSPCAG00000009543SPEN8995.550Procavia_capensis
ENSGAGG00000020785SPEN10071.724ENSPCOG00000021735SPEN9771.613Propithecus_coquereli
ENSGAGG00000020785SPEN8386.029ENSPVAG00000013794SPEN8197.065Pteropus_vampyrus
ENSGAGG00000020785SPEN9981.461ENSPNYG00000012379-10048.068Pundamilia_nyererei
ENSGAGG00000020785SPEN7183.626ENSPNYG00000009042si:ch1073-335m2.27383.626Pundamilia_nyererei
ENSGAGG00000020785SPEN9984.181ENSPNAG00000020795spen9973.759Pygocentrus_nattereri
ENSGAGG00000020785SPEN9781.609ENSPNAG00000011452si:ch1073-335m2.29981.609Pygocentrus_nattereri
ENSGAGG00000020785SPEN9895.937ENSRNOG00000033556Spen9795.937Rattus_norvegicus
ENSGAGG00000020785SPEN9972.554ENSRBIG00000039654SPEN9797.308Rhinopithecus_bieti
ENSGAGG00000020785SPEN9972.521ENSRROG00000035686SPEN9797.065Rhinopithecus_roxellana
ENSGAGG00000020785SPEN9970.421ENSSBOG00000028770SPEN9770.459Saimiri_boliviensis_boliviensis
ENSGAGG00000020785SPEN9995.519ENSSHAG00000004960SPEN9995.519Sarcophilus_harrisii
ENSGAGG00000020785SPEN10052.473ENSSFOG00015010267si:ch1073-335m2.29979.422Scleropages_formosus
ENSGAGG00000020785SPEN8964.815ENSSFOG00015007131si:ch1073-335m2.29993.519Scleropages_formosus
ENSGAGG00000020785SPEN7178.307ENSSMAG00000000125si:ch1073-335m2.29578.307Scophthalmus_maximus
ENSGAGG00000020785SPEN9982.022ENSSMAG00000008996-10048.656Scophthalmus_maximus
ENSGAGG00000020785SPEN9784.211ENSSDUG00000008416si:ch1073-335m2.210084.211Seriola_dumerili
ENSGAGG00000020785SPEN9982.584ENSSDUG00000003476-9175.465Seriola_dumerili
ENSGAGG00000020785SPEN8584.211ENSSLDG00000023347si:ch1073-335m2.28584.211Seriola_lalandi_dorsalis
ENSGAGG00000020785SPEN9982.584ENSSLDG00000012950-9175.465Seriola_lalandi_dorsalis
ENSGAGG00000020785SPEN9097.222ENSSPUG00000001866-10087.792Sphenodon_punctatus
ENSGAGG00000020785SPEN9981.461ENSSPAG00000006014-9174.532Stegastes_partitus
ENSGAGG00000020785SPEN7084.795ENSSPAG00000012454si:ch1073-335m2.27384.795Stegastes_partitus
ENSGAGG00000020785SPEN7597.456ENSSSCG00000034484SPEN9897.456Sus_scrofa
ENSGAGG00000020785SPEN10046.923ENSTRUG00000024350-10047.466Takifugu_rubripes
ENSGAGG00000020785SPEN9677.682ENSTNIG00000010907-9978.668Tetraodon_nigroviridis
ENSGAGG00000020785SPEN7075.385ENSTNIG00000014666si:ch1073-335m2.27375.385Tetraodon_nigroviridis
ENSGAGG00000020785SPEN7688.350ENSTBEG00000003628SPEN7488.350Tupaia_belangeri
ENSGAGG00000020785SPEN8287.907ENSTTRG00000015704SPEN7987.907Tursiops_truncatus
ENSGAGG00000020785SPEN10097.456ENSUAMG00000009600SPEN9797.456Ursus_americanus
ENSGAGG00000020785SPEN9971.779ENSUMAG00000021641SPEN9696.327Ursus_maritimus
ENSGAGG00000020785SPEN9599.259ENSVVUG00000028951SPEN96100.000Vulpes_vulpes
ENSGAGG00000020785SPEN10073.294ENSXETG00000023114SPEN9973.294Xenopus_tropicalis
ENSGAGG00000020785SPEN8584.615ENSXCOG00000004516si:ch1073-335m2.29184.615Xiphophorus_couchianus
ENSGAGG00000020785SPEN10047.320ENSXMAG00000021384-9072.075Xiphophorus_maculatus
ENSGAGG00000020785SPEN6684.615ENSXMAG00000029887si:ch1073-335m2.29084.615Xiphophorus_maculatus

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