EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000021058 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 86096 bases
Position: chrPPEB01001930.1:115619-201714
Accession: 26729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000029108	cwf21	PF08312.12	3.5e-15	1	1
ENSGAGP00000029105	cwf21	PF08312.12	3.9e-15	1	1
ENSGAGP00000029105	SRRM_C	PF15230.6	1.5e-24	1	1
ENSGAGP00000029108	SRRM_C	PF15230.6	4.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000033061	SRRM3-201	2396	-	ENSGAGP00000029105	633 (aa)	-	-
ENSGAGT00000033064	SRRM3-202	1851	-	ENSGAGP00000029108	584 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000021058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000021058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000021058	SRRM3	96	46.382	ENSAPOG00000000288	SRRM3	87	43.974	Acanthochromis_polyacanthus
ENSGAGG00000021058	SRRM3	97	60.307	ENSAPLG00000004545	SRRM3	59	88.362	Anas_platyrhynchos
ENSGAGG00000021058	SRRM3	95	73.227	ENSACAG00000000452	SRRM3	98	73.509	Anolis_carolinensis
ENSGAGG00000021058	SRRM3	96	41.265	ENSACLG00000005269	SRRM3	87	46.192	Astatotilapia_calliptera
ENSGAGG00000021058	SRRM3	96	47.885	ENSAMXG00000016051	-	87	48.129	Astyanax_mexicanus
ENSGAGG00000021058	SRRM3	56	58.806	ENSBTAG00000007879	-	97	58.333	Bos_taurus
ENSGAGG00000021058	SRRM3	61	54.213	ENSCPOG00000038685	SRRM3	89	51.448	Cavia_porcellus
ENSGAGG00000021058	SRRM3	71	67.347	ENSCLAG00000007682	SRRM3	90	80.357	Chinchilla_lanigera
ENSGAGG00000021058	SRRM3	97	95.230	ENSCPBG00000027784	SRRM3	100	95.118	Chrysemys_picta_bellii
ENSGAGG00000021058	SRRM3	95	44.482	ENSCSEG00000010978	-	79	44.684	Cynoglossus_semilaevis
ENSGAGG00000021058	SRRM3	78	65.714	ENSDNOG00000046922	SRRM3	90	49.094	Dasypus_novemcinctus
ENSGAGG00000021058	SRRM3	65	60.519	ENSEASG00005016840	-	98	59.326	Equus_asinus_asinus
ENSGAGG00000021058	SRRM3	97	74.390	ENSFALG00000009603	SRRM3	90	75.731	Ficedula_albicollis
ENSGAGG00000021058	SRRM3	57	84.570	ENSGALG00000001932	SRRM3	75	84.570	Gallus_gallus
ENSGAGG00000021058	SRRM3	59	42.440	ENSGAFG00000014777	SRRM3	87	44.536	Gambusia_affinis
ENSGAGG00000021058	SRRM3	96	42.623	ENSHBUG00000005061	SRRM3	87	46.370	Haplochromis_burtoni
ENSGAGG00000021058	SRRM3	78	64.458	ENSSTOG00000014181	SRRM3	90	80.357	Ictidomys_tridecemlineatus
ENSGAGG00000021058	SRRM3	54	55.108	ENSJJAG00000023441	Srrm3	96	48.136	Jaculus_jaculus
ENSGAGG00000021058	SRRM3	96	42.244	ENSKMAG00000013495	SRRM3	87	43.831	Kryptolebias_marmoratus
ENSGAGG00000021058	SRRM3	86	57.905	ENSLACG00000008008	SRRM3	96	56.897	Latimeria_chalumnae
ENSGAGG00000021058	SRRM3	56	61.696	ENSLOCG00000002879	SRRM3	98	61.696	Lepisosteus_oculatus
ENSGAGG00000021058	SRRM3	57	81.953	ENSMGAG00000003690	SRRM3	88	80.473	Meleagris_gallopavo
ENSGAGG00000021058	SRRM3	70	68.276	ENSMICG00000010668	SRRM3	88	53.368	Microcebus_murinus
ENSGAGG00000021058	SRRM3	65	76.364	ENSMODG00000029593	SRRM3	88	76.364	Monodelphis_domestica
ENSGAGG00000021058	SRRM3	90	44.946	ENSMALG00000000844	-	81	49.033	Monopterus_albus
ENSGAGG00000021058	SRRM3	96	39.866	ENSONIG00000012732	-	99	42.809	Oreochromis_niloticus
ENSGAGG00000021058	SRRM3	96	41.876	ENSOMEG00000010768	-	53	49.582	Oryzias_melastigma
ENSGAGG00000021058	SRRM3	55	65.257	ENSOGAG00000030805	SRRM3	89	55.219	Otolemur_garnettii
ENSGAGG00000021058	SRRM3	63	64.228	ENSPPRG00000006254	SRRM3	63	61.818	Panthera_pardus
ENSGAGG00000021058	SRRM3	96	49.043	ENSPKIG00000017233	SRRM3	92	50.512	Paramormyrops_kingsleyae
ENSGAGG00000021058	SRRM3	100	75.267	ENSPSIG00000007850	SRRM3	96	74.315	Pelodiscus_sinensis
ENSGAGG00000021058	SRRM3	96	40.765	ENSPMEG00000011981	-	87	44.205	Poecilia_mexicana
ENSGAGG00000021058	SRRM3	60	43.421	ENSPREG00000008138	-	87	44.868	Poecilia_reticulata
ENSGAGG00000021058	SRRM3	57	54.167	ENSPCAG00000013700	SRRM3	57	55.046	Procavia_capensis
ENSGAGG00000021058	SRRM3	56	64.264	ENSPCOG00000028464	SRRM3	89	55.668	Propithecus_coquereli
ENSGAGG00000021058	SRRM3	96	48.881	ENSPNAG00000009621	SRRM3	87	49.233	Pygocentrus_nattereri
ENSGAGG00000021058	SRRM3	57	81.250	ENSRROG00000034980	SRRM3	76	79.710	Rhinopithecus_roxellana
ENSGAGG00000021058	SRRM3	55	57.447	ENSSFOG00015001696	SRRM3	77	57.402	Scleropages_formosus
ENSGAGG00000021058	SRRM3	96	40.496	ENSSMAG00000000476	SRRM3	88	45.066	Scophthalmus_maximus
ENSGAGG00000021058	SRRM3	92	44.797	ENSSLDG00000020070	SRRM3	87	46.388	Seriola_lalandi_dorsalis
ENSGAGG00000021058	SRRM3	60	45.910	ENSXMAG00000005663	-	87	43.328	Xiphophorus_maculatus