EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000021233 (Gene tree)
Gene ID: -
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 18548 bases
Position: chrPPEB01000331.1:5692-24239
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000029374	HAT	PF02184.16	8.2e-30	1	2
ENSGAGP00000029374	HAT	PF02184.16	8.2e-30	2	2
ENSGAGP00000029382	HAT	PF02184.16	6e-28	1	2
ENSGAGP00000029382	HAT	PF02184.16	6e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000033355	CRNKL1-201	1962	-	ENSGAGP00000029374	653 (aa)	-	-
ENSGAGT00000033365	CRNKL1-202	2554	-	ENSGAGP00000029382	564 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000021233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000021233's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000021233	CRNKL1	100	91.844	ENSG00000101343	CRNKL1	95	91.768	Homo_sapiens
ENSGAGG00000021233	CRNKL1	100	85.671	ENSAPOG00000009705	crnkl1	94	86.329	Acanthochromis_polyacanthus
ENSGAGG00000021233	CRNKL1	100	93.085	ENSAMEG00000000270	CRNKL1	79	92.835	Ailuropoda_melanoleuca
ENSGAGG00000021233	CRNKL1	98	87.403	ENSACIG00000015267	crnkl1	86	87.403	Amphilophus_citrinellus
ENSGAGG00000021233	CRNKL1	100	85.823	ENSAOCG00000021964	crnkl1	87	85.823	Amphiprion_ocellaris
ENSGAGG00000021233	CRNKL1	100	85.671	ENSAPEG00000015041	crnkl1	87	85.671	Amphiprion_percula
ENSGAGG00000021233	CRNKL1	99	86.482	ENSATEG00000001068	crnkl1	85	86.482	Anabas_testudineus
ENSGAGG00000021233	CRNKL1	99	93.598	ENSAPLG00000013105	CRNKL1	95	93.598	Anas_platyrhynchos
ENSGAGG00000021233	CRNKL1	99	93.594	ENSACAG00000005284	CRNKL1	95	93.119	Anolis_carolinensis
ENSGAGG00000021233	CRNKL1	92	92.013	ENSANAG00000024889	CRNKL1	95	92.013	Aotus_nancymaae
ENSGAGG00000021233	CRNKL1	99	86.574	ENSACLG00000010813	crnkl1	86	86.574	Astatotilapia_calliptera
ENSGAGG00000021233	CRNKL1	97	88.504	ENSAMXG00000018334	crnkl1	90	86.186	Astyanax_mexicanus
ENSGAGG00000021233	CRNKL1	100	92.199	ENSBTAG00000008472	CRNKL1	95	92.073	Bos_taurus
ENSGAGG00000021233	CRNKL1	97	62.421	WBGene00019762	M03F8.3	88	61.120	Caenorhabditis_elegans
ENSGAGG00000021233	CRNKL1	100	91.667	ENSCJAG00000005393	CRNKL1	95	91.616	Callithrix_jacchus
ENSGAGG00000021233	CRNKL1	100	92.730	ENSCAFG00000005333	CRNKL1	90	92.530	Canis_familiaris
ENSGAGG00000021233	CRNKL1	100	92.730	ENSCAFG00020027488	CRNKL1	95	92.530	Canis_lupus_dingo
ENSGAGG00000021233	CRNKL1	100	92.378	ENSCHIG00000013171	CRNKL1	95	92.378	Capra_hircus
ENSGAGG00000021233	CRNKL1	100	92.021	ENSTSYG00000004197	CRNKL1	95	91.921	Carlito_syrichta
ENSGAGG00000021233	CRNKL1	100	91.667	ENSCAPG00000010501	CRNKL1	99	91.667	Cavia_aperea
ENSGAGG00000021233	CRNKL1	100	91.489	ENSCPOG00000004418	CRNKL1	95	91.463	Cavia_porcellus
ENSGAGG00000021233	CRNKL1	100	91.489	ENSCCAG00000027037	CRNKL1	95	91.463	Cebus_capucinus
ENSGAGG00000021233	CRNKL1	100	92.508	ENSCATG00000034247	CRNKL1	95	91.616	Cercocebus_atys
ENSGAGG00000021233	CRNKL1	100	92.730	ENSCLAG00000013859	CRNKL1	95	92.530	Chinchilla_lanigera
ENSGAGG00000021233	CRNKL1	100	91.667	ENSCSAG00000011434	CRNKL1	95	91.616	Chlorocebus_sabaeus
ENSGAGG00000021233	CRNKL1	100	92.376	ENSCHOG00000006371	CRNKL1	80	92.226	Choloepus_hoffmanni
ENSGAGG00000021233	CRNKL1	100	99.823	ENSCPBG00000023501	CRNKL1	96	98.323	Chrysemys_picta_bellii
ENSGAGG00000021233	CRNKL1	97	69.174	ENSCING00000002709	-	95	67.851	Ciona_intestinalis
ENSGAGG00000021233	CRNKL1	100	92.661	ENSCANG00000038789	CRNKL1	95	91.768	Colobus_angolensis_palliatus
ENSGAGG00000021233	CRNKL1	100	92.908	ENSCGRG00001001115	-	95	92.835	Cricetulus_griseus_chok1gshd
ENSGAGG00000021233	CRNKL1	100	92.908	ENSCGRG00001000687	-	95	92.835	Cricetulus_griseus_chok1gshd
ENSGAGG00000021233	CRNKL1	100	92.908	ENSCGRG00000007854	Crnkl1	95	92.835	Cricetulus_griseus_crigri
ENSGAGG00000021233	CRNKL1	98	86.101	ENSCSEG00000005594	crnkl1	82	85.913	Cynoglossus_semilaevis
ENSGAGG00000021233	CRNKL1	97	87.156	ENSCVAG00000015172	crnkl1	88	84.451	Cyprinodon_variegatus
ENSGAGG00000021233	CRNKL1	96	87.246	ENSDARG00000007901	crnkl1	87	85.344	Danio_rerio
ENSGAGG00000021233	CRNKL1	99	92.692	ENSDNOG00000016226	CRNKL1	91	92.496	Dasypus_novemcinctus
ENSGAGG00000021233	CRNKL1	98	83.931	ENSDORG00000030174	-	95	83.931	Dipodomys_ordii
ENSGAGG00000021233	CRNKL1	100	90.634	ENSDORG00000000394	-	96	90.634	Dipodomys_ordii
ENSGAGG00000021233	CRNKL1	97	85.375	ENSDORG00000023724	-	94	85.290	Dipodomys_ordii
ENSGAGG00000021233	CRNKL1	97	67.391	FBgn0000377	crn	92	67.391	Drosophila_melanogaster
ENSGAGG00000021233	CRNKL1	100	79.878	ENSETEG00000003711	CRNKL1	80	79.878	Echinops_telfairi
ENSGAGG00000021233	CRNKL1	99	61.155	ENSEBUG00000013461	crnkl1	88	61.155	Eptatretus_burgeri
ENSGAGG00000021233	CRNKL1	100	93.085	ENSEASG00005002072	CRNKL1	95	92.835	Equus_asinus_asinus
ENSGAGG00000021233	CRNKL1	100	93.085	ENSECAG00000022215	CRNKL1	95	92.835	Equus_caballus
ENSGAGG00000021233	CRNKL1	100	89.716	ENSEEUG00000000413	CRNKL1	88	89.634	Erinaceus_europaeus
ENSGAGG00000021233	CRNKL1	97	85.558	ENSELUG00000015424	crnkl1	93	83.969	Esox_lucius
ENSGAGG00000021233	CRNKL1	100	93.085	ENSFCAG00000000714	CRNKL1	95	92.835	Felis_catus
ENSGAGG00000021233	CRNKL1	100	92.085	ENSFALG00000004611	CRNKL1	98	92.085	Ficedula_albicollis
ENSGAGG00000021233	CRNKL1	100	92.553	ENSFDAG00000000604	CRNKL1	95	92.378	Fukomys_damarensis
ENSGAGG00000021233	CRNKL1	98	86.232	ENSFHEG00000013163	crnkl1	84	85.559	Fundulus_heteroclitus
ENSGAGG00000021233	CRNKL1	97	85.133	ENSGMOG00000007609	crnkl1	90	83.562	Gadus_morhua
ENSGAGG00000021233	CRNKL1	100	93.440	ENSGALG00000008429	CRNKL1	96	92.835	Gallus_gallus
ENSGAGG00000021233	CRNKL1	98	85.491	ENSGAFG00000014249	crnkl1	85	85.404	Gambusia_affinis
ENSGAGG00000021233	CRNKL1	99	84.733	ENSGACG00000011852	crnkl1	87	84.733	Gasterosteus_aculeatus
ENSGAGG00000021233	CRNKL1	100	91.844	ENSGGOG00000014176	CRNKL1	95	91.768	Gorilla_gorilla
ENSGAGG00000021233	CRNKL1	99	86.574	ENSHBUG00000005246	crnkl1	86	86.574	Haplochromis_burtoni
ENSGAGG00000021233	CRNKL1	100	92.199	ENSHGLG00000010856	CRNKL1	95	92.073	Heterocephalus_glaber_female
ENSGAGG00000021233	CRNKL1	100	92.199	ENSHGLG00100011521	CRNKL1	95	92.073	Heterocephalus_glaber_male
ENSGAGG00000021233	CRNKL1	97	85.893	ENSHCOG00000006420	crnkl1	94	84.380	Hippocampus_comes
ENSGAGG00000021233	CRNKL1	88	74.400	ENSIPUG00000000315	-	95	69.421	Ictalurus_punctatus
ENSGAGG00000021233	CRNKL1	97	76.378	ENSIPUG00000006836	-	94	76.131	Ictalurus_punctatus
ENSGAGG00000021233	CRNKL1	97	88.836	ENSIPUG00000006751	crnkl1	91	86.910	Ictalurus_punctatus
ENSGAGG00000021233	CRNKL1	100	92.730	ENSSTOG00000014747	CRNKL1	95	92.530	Ictidomys_tridecemlineatus
ENSGAGG00000021233	CRNKL1	100	90.923	ENSJJAG00000016926	Crnkl1	96	90.923	Jaculus_jaculus
ENSGAGG00000021233	CRNKL1	99	86.090	ENSKMAG00000003620	crnkl1	82	86.090	Kryptolebias_marmoratus
ENSGAGG00000021233	CRNKL1	97	70.295	ENSLBEG00000003543	crnkl1	88	70.561	Labrus_bergylta
ENSGAGG00000021233	CRNKL1	99	87.722	ENSLACG00000001129	CRNKL1	96	87.615	Latimeria_chalumnae
ENSGAGG00000021233	CRNKL1	97	88.346	ENSLOCG00000016889	crnkl1	90	87.500	Lepisosteus_oculatus
ENSGAGG00000021233	CRNKL1	100	92.730	ENSLAFG00000004512	CRNKL1	95	92.530	Loxodonta_africana
ENSGAGG00000021233	CRNKL1	100	91.667	ENSMFAG00000039893	CRNKL1	95	91.616	Macaca_fascicularis
ENSGAGG00000021233	CRNKL1	100	91.667	ENSMMUG00000007709	CRNKL1	95	91.616	Macaca_mulatta
ENSGAGG00000021233	CRNKL1	100	91.667	ENSMNEG00000037490	CRNKL1	95	91.616	Macaca_nemestrina
ENSGAGG00000021233	CRNKL1	100	91.667	ENSMLEG00000034885	CRNKL1	95	91.616	Mandrillus_leucophaeus
ENSGAGG00000021233	CRNKL1	100	85.106	ENSMAMG00000008757	crnkl1	86	84.756	Mastacembelus_armatus
ENSGAGG00000021233	CRNKL1	99	86.574	ENSMZEG00005022345	crnkl1	86	86.574	Maylandia_zebra
ENSGAGG00000021233	CRNKL1	100	92.920	ENSMGAG00000003452	CRNKL1	90	92.542	Meleagris_gallopavo
ENSGAGG00000021233	CRNKL1	100	92.730	ENSMAUG00000020764	Crnkl1	95	92.683	Mesocricetus_auratus
ENSGAGG00000021233	CRNKL1	100	92.553	ENSMICG00000006048	CRNKL1	95	92.378	Microcebus_murinus
ENSGAGG00000021233	CRNKL1	100	90.972	ENSMOCG00000000681	-	98	88.110	Microtus_ochrogaster
ENSGAGG00000021233	CRNKL1	96	65.877	ENSMOCG00000004179	-	93	65.138	Microtus_ochrogaster
ENSGAGG00000021233	CRNKL1	92	85.714	ENSMMOG00000017601	crnkl1	92	85.714	Mola_mola
ENSGAGG00000021233	CRNKL1	100	89.474	ENSMODG00000005961	-	95	89.474	Monodelphis_domestica
ENSGAGG00000021233	CRNKL1	100	84.604	ENSMODG00000010857	-	95	84.604	Monodelphis_domestica
ENSGAGG00000021233	CRNKL1	98	64.190	ENSMALG00000011211	crnkl1	83	67.606	Monopterus_albus
ENSGAGG00000021233	CRNKL1	100	92.730	MGP_CAROLIEiJ_G0024394	Crnkl1	95	92.683	Mus_caroli
ENSGAGG00000021233	CRNKL1	100	92.908	ENSMUSG00000001767	Crnkl1	95	92.835	Mus_musculus
ENSGAGG00000021233	CRNKL1	100	91.159	MGP_PahariEiJ_G0025838	Crnkl1	95	91.159	Mus_pahari
ENSGAGG00000021233	CRNKL1	100	92.908	MGP_SPRETEiJ_G0025312	Crnkl1	95	92.835	Mus_spretus
ENSGAGG00000021233	CRNKL1	100	92.908	ENSMPUG00000001226	CRNKL1	95	92.683	Mustela_putorius_furo
ENSGAGG00000021233	CRNKL1	100	92.389	ENSMLUG00000016513	CRNKL1	85	92.237	Myotis_lucifugus
ENSGAGG00000021233	CRNKL1	100	90.135	ENSNGAG00000023097	Crnkl1	96	90.135	Nannospalax_galili
ENSGAGG00000021233	CRNKL1	99	86.728	ENSNBRG00000007867	crnkl1	85	86.728	Neolamprologus_brichardi
ENSGAGG00000021233	CRNKL1	100	89.908	ENSNLEG00000009862	CRNKL1	95	89.908	Nomascus_leucogenys
ENSGAGG00000021233	CRNKL1	100	85.310	ENSMEUG00000002361	-	95	84.779	Notamacropus_eugenii
ENSGAGG00000021233	CRNKL1	100	92.730	ENSMEUG00000012167	-	98	92.530	Notamacropus_eugenii
ENSGAGG00000021233	CRNKL1	92	63.707	ENSOPRG00000009242	-	61	63.707	Ochotona_princeps
ENSGAGG00000021233	CRNKL1	100	92.199	ENSODEG00000012175	CRNKL1	95	92.073	Octodon_degus
ENSGAGG00000021233	CRNKL1	99	85.802	ENSONIG00000018728	crnkl1	85	86.574	Oreochromis_niloticus
ENSGAGG00000021233	CRNKL1	99	93.226	ENSOCUG00000015484	CRNKL1	79	92.956	Oryctolagus_cuniculus
ENSGAGG00000021233	CRNKL1	100	83.333	ENSORLG00000017240	crnkl1	92	80.938	Oryzias_latipes
ENSGAGG00000021233	CRNKL1	97	85.688	ENSORLG00020001742	crnkl1	85	85.243	Oryzias_latipes_hni
ENSGAGG00000021233	CRNKL1	100	83.511	ENSORLG00015019564	crnkl1	88	83.384	Oryzias_latipes_hsok
ENSGAGG00000021233	CRNKL1	100	84.397	ENSOMEG00000019895	crnkl1	88	84.146	Oryzias_melastigma
ENSGAGG00000021233	CRNKL1	100	91.844	ENSOGAG00000011544	CRNKL1	95	91.768	Otolemur_garnettii
ENSGAGG00000021233	CRNKL1	100	92.199	ENSOARG00000002150	CRNKL1	85	92.073	Ovis_aries
ENSGAGG00000021233	CRNKL1	100	92.508	ENSPPAG00000027847	CRNKL1	79	92.508	Pan_paniscus
ENSGAGG00000021233	CRNKL1	100	93.085	ENSPPRG00000001955	CRNKL1	95	92.835	Panthera_pardus
ENSGAGG00000021233	CRNKL1	100	93.568	ENSPTIG00000007393	CRNKL1	95	92.835	Panthera_tigris_altaica
ENSGAGG00000021233	CRNKL1	100	91.844	ENSPTRG00000030609	CRNKL1	95	91.768	Pan_troglodytes
ENSGAGG00000021233	CRNKL1	100	91.667	ENSPANG00000017420	CRNKL1	95	91.616	Papio_anubis
ENSGAGG00000021233	CRNKL1	96	83.019	ENSPKIG00000017093	crnkl1	85	82.389	Paramormyrops_kingsleyae
ENSGAGG00000021233	CRNKL1	100	97.695	ENSPSIG00000012705	CRNKL1	95	96.799	Pelodiscus_sinensis
ENSGAGG00000021233	CRNKL1	99	79.385	ENSPMGG00000006263	crnkl1	92	78.671	Periophthalmus_magnuspinnatus
ENSGAGG00000021233	CRNKL1	100	93.262	ENSPEMG00000000073	-	95	93.140	Peromyscus_maniculatus_bairdii
ENSGAGG00000021233	CRNKL1	99	81.487	ENSPMAG00000002250	crnkl1	95	81.487	Petromyzon_marinus
ENSGAGG00000021233	CRNKL1	100	91.768	ENSPCIG00000025825	CRNKL1	92	91.768	Phascolarctos_cinereus
ENSGAGG00000021233	CRNKL1	98	85.335	ENSPFOG00000005102	crnkl1	87	85.248	Poecilia_formosa
ENSGAGG00000021233	CRNKL1	98	85.335	ENSPLAG00000007288	crnkl1	84	85.248	Poecilia_latipinna
ENSGAGG00000021233	CRNKL1	98	85.491	ENSPMEG00000008865	crnkl1	88	85.404	Poecilia_mexicana
ENSGAGG00000021233	CRNKL1	97	85.557	ENSPREG00000012615	crnkl1	86	85.093	Poecilia_reticulata
ENSGAGG00000021233	CRNKL1	100	91.844	ENSPPYG00000010747	CRNKL1	77	91.768	Pongo_abelii
ENSGAGG00000021233	CRNKL1	100	86.738	ENSPCAG00000003296	CRNKL1	81	86.738	Procavia_capensis
ENSGAGG00000021233	CRNKL1	100	91.311	ENSPCOG00000017608	CRNKL1	79	91.311	Propithecus_coquereli
ENSGAGG00000021233	CRNKL1	100	92.553	ENSPVAG00000006207	CRNKL1	80	92.378	Pteropus_vampyrus
ENSGAGG00000021233	CRNKL1	99	86.420	ENSPNYG00000001977	crnkl1	86	86.420	Pundamilia_nyererei
ENSGAGG00000021233	CRNKL1	98	89.080	ENSPNAG00000001507	crnkl1	94	84.195	Pygocentrus_nattereri
ENSGAGG00000021233	CRNKL1	100	92.553	ENSRNOG00000040045	Crnkl1	95	92.530	Rattus_norvegicus
ENSGAGG00000021233	CRNKL1	100	92.908	ENSRNOG00000010587	Crnkl1	95	92.835	Rattus_norvegicus
ENSGAGG00000021233	CRNKL1	100	91.489	ENSRBIG00000031770	CRNKL1	95	91.463	Rhinopithecus_bieti
ENSGAGG00000021233	CRNKL1	100	91.312	ENSRROG00000040450	CRNKL1	95	91.311	Rhinopithecus_roxellana
ENSGAGG00000021233	CRNKL1	96	38.567	YLR117C	CLF1	94	38.998	Saccharomyces_cerevisiae
ENSGAGG00000021233	CRNKL1	100	92.202	ENSSBOG00000029672	CRNKL1	95	91.463	Saimiri_boliviensis_boliviensis
ENSGAGG00000021233	CRNKL1	97	74.375	ENSSHAG00000011199	CRNKL1	96	74.375	Sarcophilus_harrisii
ENSGAGG00000021233	CRNKL1	96	87.431	ENSSFOG00015000946	crnkl1	85	85.038	Scleropages_formosus
ENSGAGG00000021233	CRNKL1	99	84.862	ENSSMAG00000007933	crnkl1	85	84.862	Scophthalmus_maximus
ENSGAGG00000021233	CRNKL1	100	79.300	ENSSDUG00000012625	crnkl1	83	80.000	Seriola_dumerili
ENSGAGG00000021233	CRNKL1	100	85.366	ENSSLDG00000021413	crnkl1	84	86.133	Seriola_lalandi_dorsalis
ENSGAGG00000021233	CRNKL1	100	91.844	ENSSARG00000006443	CRNKL1	79	91.768	Sorex_araneus
ENSGAGG00000021233	CRNKL1	99	93.594	ENSSPUG00000005254	CRNKL1	95	93.119	Sphenodon_punctatus
ENSGAGG00000021233	CRNKL1	97	87.523	ENSSPAG00000016150	crnkl1	82	87.284	Stegastes_partitus
ENSGAGG00000021233	CRNKL1	100	92.908	ENSSSCG00000038587	CRNKL1	95	92.683	Sus_scrofa
ENSGAGG00000021233	CRNKL1	100	91.681	ENSTGUG00000007645	CRNKL1	94	91.629	Taeniopygia_guttata
ENSGAGG00000021233	CRNKL1	98	82.445	ENSTRUG00000015417	crnkl1	86	81.607	Takifugu_rubripes
ENSGAGG00000021233	CRNKL1	97	86.364	ENSTNIG00000010710	crnkl1	95	84.779	Tetraodon_nigroviridis
ENSGAGG00000021233	CRNKL1	92	90.682	ENSTBEG00000001304	CRNKL1	78	90.682	Tupaia_belangeri
ENSGAGG00000021233	CRNKL1	92	88.353	ENSTTRG00000000484	CRNKL1	77	88.353	Tursiops_truncatus
ENSGAGG00000021233	CRNKL1	100	93.085	ENSUAMG00000018586	CRNKL1	95	92.835	Ursus_americanus
ENSGAGG00000021233	CRNKL1	100	93.085	ENSUMAG00000024957	CRNKL1	95	92.835	Ursus_maritimus
ENSGAGG00000021233	CRNKL1	100	92.730	ENSVVUG00000012559	CRNKL1	79	92.530	Vulpes_vulpes
ENSGAGG00000021233	CRNKL1	100	89.970	ENSXETG00000009698	crnkl1	96	89.954	Xenopus_tropicalis
ENSGAGG00000021233	CRNKL1	98	85.670	ENSXCOG00000000824	crnkl1	86	85.581	Xiphophorus_couchianus
ENSGAGG00000021233	CRNKL1	98	85.491	ENSXMAG00000006896	crnkl1	86	85.404	Xiphophorus_maculatus