EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000021327 (Gene tree)
Gene ID: -
Gene Symbol: GFI1B
Alias: ZNF163B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 7490 bases
Position: chrPPEB01001491.1:240854-248343
Accession: 4238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000029528	zf-C2H2	PF00096.26	5.7e-29	1	6
ENSGAGP00000029528	zf-C2H2	PF00096.26	5.7e-29	2	6
ENSGAGP00000029528	zf-C2H2	PF00096.26	5.7e-29	3	6
ENSGAGP00000029528	zf-C2H2	PF00096.26	5.7e-29	4	6
ENSGAGP00000029528	zf-C2H2	PF00096.26	5.7e-29	5	6
ENSGAGP00000029528	zf-C2H2	PF00096.26	5.7e-29	6	6
ENSGAGP00000029528	zf-met	PF12874.7	6.8e-08	1	2
ENSGAGP00000029528	zf-met	PF12874.7	6.8e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000033528	GFI1B-201	993	-	ENSGAGP00000029528	330 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000021327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000021327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000021327	GFI1B	52	46.584	ENSGAGG00000002828	-	67	46.584
ENSGAGG00000021327	GFI1B	53	41.045	ENSGAGG00000004926	-	87	41.045
ENSGAGG00000021327	GFI1B	52	46.746	ENSGAGG00000000971	-	89	46.746
ENSGAGG00000021327	GFI1B	53	45.522	ENSGAGG00000019349	-	73	45.522
ENSGAGG00000021327	GFI1B	50	41.615	ENSGAGG00000022571	ZNF319	95	41.615
ENSGAGG00000021327	GFI1B	67	45.455	ENSGAGG00000013851	-	84	45.455
ENSGAGG00000021327	GFI1B	58	45.963	ENSGAGG00000006683	-	84	45.860
ENSGAGG00000021327	GFI1B	50	43.421	ENSGAGG00000017094	-	52	43.421
ENSGAGG00000021327	GFI1B	61	49.689	ENSGAGG00000014389	-	96	49.689
ENSGAGG00000021327	GFI1B	52	47.748	ENSGAGG00000017986	-	90	47.748
ENSGAGG00000021327	GFI1B	63	33.908	ENSGAGG00000022082	PRDM15	56	33.908
ENSGAGG00000021327	GFI1B	85	48.125	ENSGAGG00000010833	-	90	48.125
ENSGAGG00000021327	GFI1B	52	55.556	ENSGAGG00000020168	-	71	55.556
ENSGAGG00000021327	GFI1B	69	47.826	ENSGAGG00000008773	-	93	47.826
ENSGAGG00000021327	GFI1B	52	50.000	ENSGAGG00000002179	-	90	47.368
ENSGAGG00000021327	GFI1B	64	46.667	ENSGAGG00000011399	-	96	46.667
ENSGAGG00000021327	GFI1B	52	47.101	ENSGAGG00000004740	-	90	47.101
ENSGAGG00000021327	GFI1B	52	47.826	ENSGAGG00000009739	-	99	47.826
ENSGAGG00000021327	GFI1B	52	46.667	ENSGAGG00000016529	-	83	46.667
ENSGAGG00000021327	GFI1B	56	40.244	ENSGAGG00000003095	ZNF865	76	40.244
ENSGAGG00000021327	GFI1B	66	48.447	ENSGAGG00000009272	-	99	42.105
ENSGAGG00000021327	GFI1B	69	47.059	ENSGAGG00000003883	ZNF236	59	47.059
ENSGAGG00000021327	GFI1B	55	44.444	ENSGAGG00000006848	-	60	44.444
ENSGAGG00000021327	GFI1B	50	44.944	ENSGAGG00000010324	-	62	44.944
ENSGAGG00000021327	GFI1B	50	43.571	ENSGAGG00000005331	-	67	43.571
ENSGAGG00000021327	GFI1B	58	47.205	ENSGAGG00000020594	-	79	47.205
ENSGAGG00000021327	GFI1B	58	46.358	ENSGAGG00000014356	-	74	46.358
ENSGAGG00000021327	GFI1B	64	44.375	ENSGAGG00000005805	-	93	44.375
ENSGAGG00000021327	GFI1B	51	45.638	ENSGAGG00000015451	-	81	45.161
ENSGAGG00000021327	GFI1B	62	37.857	ENSGAGG00000020362	PRDM5	69	37.857
ENSGAGG00000021327	GFI1B	51	45.963	ENSGAGG00000006960	-	83	45.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000021327	GFI1B	100	59.639	ENSAPOG00000001296	gfi1b	100	59.639	Acanthochromis_polyacanthus
ENSGAGG00000021327	GFI1B	67	73.661	ENSACIG00000002190	gfi1b	73	73.661	Amphilophus_citrinellus
ENSGAGG00000021327	GFI1B	100	59.940	ENSAOCG00000021187	gfi1b	100	59.940	Amphiprion_ocellaris
ENSGAGG00000021327	GFI1B	100	60.542	ENSAPEG00000016196	gfi1b	100	60.542	Amphiprion_percula
ENSGAGG00000021327	GFI1B	100	59.459	ENSATEG00000002534	gfi1b	100	59.459	Anabas_testudineus
ENSGAGG00000021327	GFI1B	100	82.388	ENSAPLG00000003373	GFI1B	100	82.388	Anas_platyrhynchos
ENSGAGG00000021327	GFI1B	100	57.478	ENSACLG00000027053	gfi1b	100	57.478	Astatotilapia_calliptera
ENSGAGG00000021327	GFI1B	100	61.652	ENSAMXG00000037544	GFI1B	100	61.652	Astyanax_mexicanus
ENSGAGG00000021327	GFI1B	100	68.915	ENSCAPG00000010404	GFI1B	100	68.915	Cavia_aperea
ENSGAGG00000021327	GFI1B	100	94.152	ENSCPBG00000021186	GFI1B	100	94.152	Chrysemys_picta_bellii
ENSGAGG00000021327	GFI1B	100	59.036	ENSCSEG00000001315	gfi1b	100	59.036	Cynoglossus_semilaevis
ENSGAGG00000021327	GFI1B	100	59.940	ENSCVAG00000017168	gfi1b	100	59.940	Cyprinodon_variegatus
ENSGAGG00000021327	GFI1B	100	62.791	ENSDARG00000079947	gfi1b	97	78.879	Danio_rerio
ENSGAGG00000021327	GFI1B	68	58.407	ENSEEUG00000012609	-	100	58.407	Erinaceus_europaeus
ENSGAGG00000021327	GFI1B	100	61.696	ENSELUG00000016933	gfi1b	100	61.696	Esox_lucius
ENSGAGG00000021327	GFI1B	100	76.033	ENSFALG00000001479	GFI1B	100	76.033	Ficedula_albicollis
ENSGAGG00000021327	GFI1B	100	59.880	ENSFHEG00000015138	gfi1b	100	59.880	Fundulus_heteroclitus
ENSGAGG00000021327	GFI1B	70	77.253	ENSGMOG00000019123	gfi1b	87	77.253	Gadus_morhua
ENSGAGG00000021327	GFI1B	100	83.086	ENSGALG00000003478	GFI1B	100	83.086	Gallus_gallus
ENSGAGG00000021327	GFI1B	70	75.431	ENSGAFG00000003059	gfi1b	98	75.431	Gambusia_affinis
ENSGAGG00000021327	GFI1B	100	58.475	ENSGACG00000018134	gfi1b	100	58.475	Gasterosteus_aculeatus
ENSGAGG00000021327	GFI1B	100	57.478	ENSHBUG00000005451	gfi1b	100	57.478	Haplochromis_burtoni
ENSGAGG00000021327	GFI1B	100	59.581	ENSHCOG00000013713	gfi1b	100	59.581	Hippocampus_comes
ENSGAGG00000021327	GFI1B	100	61.471	ENSIPUG00000012769	gfi1b	100	61.471	Ictalurus_punctatus
ENSGAGG00000021327	GFI1B	99	65.768	ENSJJAG00000016355	Gfi1b	100	65.768	Jaculus_jaculus
ENSGAGG00000021327	GFI1B	100	60.597	ENSKMAG00000016047	gfi1b	100	60.597	Kryptolebias_marmoratus
ENSGAGG00000021327	GFI1B	100	60.831	ENSLBEG00000020297	gfi1b	99	60.831	Labrus_bergylta
ENSGAGG00000021327	GFI1B	100	66.181	ENSLACG00000012207	GFI1B	100	66.181	Latimeria_chalumnae
ENSGAGG00000021327	GFI1B	100	58.310	ENSLOCG00000005750	gfi1b	100	58.310	Lepisosteus_oculatus
ENSGAGG00000021327	GFI1B	100	70.571	ENSLAFG00000022367	GFI1B	100	71.045	Loxodonta_africana
ENSGAGG00000021327	GFI1B	100	61.791	ENSMAMG00000003040	gfi1b	100	61.791	Mastacembelus_armatus
ENSGAGG00000021327	GFI1B	99	57.647	ENSMZEG00005015594	gfi1b	99	57.647	Maylandia_zebra
ENSGAGG00000021327	GFI1B	100	82.789	ENSMGAG00000006129	GFI1B	100	82.789	Meleagris_gallopavo
ENSGAGG00000021327	GFI1B	100	61.243	ENSMMOG00000011764	gfi1b	100	61.243	Mola_mola
ENSGAGG00000021327	GFI1B	100	65.761	ENSMODG00000012600	GFI1B	100	65.761	Monodelphis_domestica
ENSGAGG00000021327	GFI1B	100	60.237	ENSMALG00000004034	gfi1b	100	60.237	Monopterus_albus
ENSGAGG00000021327	GFI1B	99	71.084	ENSNGAG00000003333	Gfi1b	100	71.084	Nannospalax_galili
ENSGAGG00000021327	GFI1B	100	56.484	ENSNBRG00000012391	gfi1b	100	56.484	Neolamprologus_brichardi
ENSGAGG00000021327	GFI1B	100	56.886	ENSONIG00000013011	gfi1b	100	82.682	Oreochromis_niloticus
ENSGAGG00000021327	GFI1B	100	73.887	ENSOANG00000014723	GFI1B	100	73.887	Ornithorhynchus_anatinus
ENSGAGG00000021327	GFI1B	100	45.373	ENSORLG00000014390	GFI1B	96	50.704	Oryzias_latipes
ENSGAGG00000021327	GFI1B	100	58.036	ENSORLG00020003719	GFI1B	100	58.036	Oryzias_latipes_hni
ENSGAGG00000021327	GFI1B	100	57.738	ENSORLG00015017142	gfi1b	100	57.738	Oryzias_latipes_hsok
ENSGAGG00000021327	GFI1B	100	58.434	ENSOMEG00000015149	GFI1B	100	58.434	Oryzias_melastigma
ENSGAGG00000021327	GFI1B	100	69.436	ENSOGAG00000008879	GFI1B	100	69.733	Otolemur_garnettii
ENSGAGG00000021327	GFI1B	100	62.130	ENSPKIG00000007643	gfi1b	100	62.130	Paramormyrops_kingsleyae
ENSGAGG00000021327	GFI1B	100	90.351	ENSPSIG00000012112	GFI1B	100	90.351	Pelodiscus_sinensis
ENSGAGG00000021327	GFI1B	99	57.227	ENSPMGG00000006021	gfi1b	99	58.876	Periophthalmus_magnuspinnatus
ENSGAGG00000021327	GFI1B	100	66.038	ENSPCIG00000019724	GFI1B	100	66.038	Phascolarctos_cinereus
ENSGAGG00000021327	GFI1B	100	59.884	ENSPFOG00000003460	gfi1b	100	59.884	Poecilia_formosa
ENSGAGG00000021327	GFI1B	100	59.366	ENSPLAG00000017181	GFI1B	100	59.366	Poecilia_latipinna
ENSGAGG00000021327	GFI1B	100	61.243	ENSPLAG00000021960	GFI1B	100	61.243	Poecilia_latipinna
ENSGAGG00000021327	GFI1B	100	60.947	ENSPMEG00000019220	gfi1b	100	60.947	Poecilia_mexicana
ENSGAGG00000021327	GFI1B	100	60.947	ENSPMEG00000001556	GFI1B	100	60.947	Poecilia_mexicana
ENSGAGG00000021327	GFI1B	100	60.651	ENSPREG00000021718	gfi1b	100	60.651	Poecilia_reticulata
ENSGAGG00000021327	GFI1B	100	56.140	ENSPNYG00000018422	gfi1b	100	56.140	Pundamilia_nyererei
ENSGAGG00000021327	GFI1B	100	59.599	ENSPNAG00000021118	gfi1b	100	59.599	Pygocentrus_nattereri
ENSGAGG00000021327	GFI1B	100	59.189	ENSSHAG00000006462	GFI1B	100	59.189	Sarcophilus_harrisii
ENSGAGG00000021327	GFI1B	83	55.709	ENSSFOG00015011566	gfi1b	90	56.207	Scleropages_formosus
ENSGAGG00000021327	GFI1B	99	60.060	ENSSMAG00000015181	gfi1b	99	60.060	Scophthalmus_maximus
ENSGAGG00000021327	GFI1B	100	61.424	ENSSDUG00000011604	gfi1b	100	61.424	Seriola_dumerili
ENSGAGG00000021327	GFI1B	100	61.721	ENSSLDG00000013823	gfi1b	100	61.721	Seriola_lalandi_dorsalis
ENSGAGG00000021327	GFI1B	100	68.529	ENSSPUG00000016039	GFI1B	100	68.529	Sphenodon_punctatus
ENSGAGG00000021327	GFI1B	100	59.644	ENSSPAG00000022914	gfi1b	100	59.644	Stegastes_partitus
ENSGAGG00000021327	GFI1B	52	100.000	ENSTGUG00000005282	-	100	100.000	Taeniopygia_guttata
ENSGAGG00000021327	GFI1B	51	77.844	ENSTGUG00000015953	-	88	77.844	Taeniopygia_guttata
ENSGAGG00000021327	GFI1B	100	56.805	ENSTRUG00000004525	gfi1b	100	56.805	Takifugu_rubripes
ENSGAGG00000021327	GFI1B	100	58.284	ENSTNIG00000003834	gfi1b	100	58.284	Tetraodon_nigroviridis
ENSGAGG00000021327	GFI1B	100	55.357	ENSTBEG00000014459	GFI1B	100	55.357	Tupaia_belangeri
ENSGAGG00000021327	GFI1B	100	61.318	ENSXETG00000006263	gfi1b	100	62.874	Xenopus_tropicalis
ENSGAGG00000021327	GFI1B	100	61.791	ENSXMAG00000027589	gfi1b	100	61.791	Xiphophorus_maculatus