EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000021478 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 1853 bases
Position: chrPPEB01006252.1:75680-77532
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000029750	zf-CCCH	PF00642.24	4.5e-20	1	2
ENSGAGP00000029750	zf-CCCH	PF00642.24	4.5e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000033779	-	864	-	ENSGAGP00000029750	287 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000021478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000021478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000021478	-	69	42.975	ENSGAGG00000007315	ZFP36L1	72	42.339
ENSGAGG00000021478	-	76	38.966	ENSGAGG00000021476	ZFP36	93	38.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000021478	-	64	48.691	ENSCANG00000039077	ZFP36L2	51	48.421	Colobus_angolensis_palliatus
ENSGAGG00000021478	-	66	48.889	ENSEBUG00000004152	zfp36l2	58	50.000	Eptatretus_burgeri
ENSGAGG00000021478	-	66	46.575	ENSKMAG00000011495	zfp36l2	72	46.188	Kryptolebias_marmoratus
ENSGAGG00000021478	-	66	37.387	ENSMALG00000005933	zfp36l2	66	43.868	Monopterus_albus
ENSGAGG00000021478	-	74	42.308	ENSPKIG00000005232	-	77	43.750	Paramormyrops_kingsleyae
ENSGAGG00000021478	-	67	44.223	ENSXETG00000009274	zfp36l2	67	42.000	Xenopus_tropicalis