EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000021691 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 16552 bases
Position: chrPPEB01007043.1:41534-58085
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000030061	KH_1	PF00013.29	3.7e-07	1	1
ENSGAGP00000030061	zf-CCHC	PF00098.23	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000034133	SF1-201	3346	-	ENSGAGP00000030061	702 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000021691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000021691's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000021691	SF1	71	70.736	ENSAPOG00000012341	sf1	62	81.395	Acanthochromis_polyacanthus
ENSGAGG00000021691	SF1	72	85.907	ENSAMEG00000017828	SF1	71	89.011	Ailuropoda_melanoleuca
ENSGAGG00000021691	SF1	68	70.021	ENSACIG00000016514	sf1	64	82.452	Amphilophus_citrinellus
ENSGAGG00000021691	SF1	71	70.680	ENSAOCG00000010934	sf1	62	81.628	Amphiprion_ocellaris
ENSGAGG00000021691	SF1	71	70.680	ENSAPEG00000009498	sf1	62	81.628	Amphiprion_percula
ENSGAGG00000021691	SF1	68	71.811	ENSATEG00000001894	sf1	63	81.481	Anabas_testudineus
ENSGAGG00000021691	SF1	72	77.432	ENSANAG00000022607	-	88	82.192	Aotus_nancymaae
ENSGAGG00000021691	SF1	72	85.907	ENSANAG00000026664	-	96	88.235	Aotus_nancymaae
ENSGAGG00000021691	SF1	68	70.902	ENSACLG00000007633	sf1	77	69.697	Astatotilapia_calliptera
ENSGAGG00000021691	SF1	70	74.008	ENSAMXG00000003630	sf1	55	85.817	Astyanax_mexicanus
ENSGAGG00000021691	SF1	72	85.135	ENSBTAG00000001035	SF1	75	89.011	Bos_taurus
ENSGAGG00000021691	SF1	72	85.300	ENSCJAG00000002780	SF1	71	89.011	Callithrix_jacchus
ENSGAGG00000021691	SF1	72	85.135	ENSCAFG00000014239	SF1	71	89.011	Canis_familiaris
ENSGAGG00000021691	SF1	72	85.135	ENSCAFG00020014381	SF1	71	89.011	Canis_lupus_dingo
ENSGAGG00000021691	SF1	72	85.300	ENSCHIG00000025867	SF1	83	89.011	Capra_hircus
ENSGAGG00000021691	SF1	57	90.909	ENSCAPG00000010762	SF1	76	89.835	Cavia_aperea
ENSGAGG00000021691	SF1	72	85.465	ENSCPOG00000012290	SF1	85	89.207	Cavia_porcellus
ENSGAGG00000021691	SF1	72	77.756	ENSCCAG00000023781	-	88	77.876	Cebus_capucinus
ENSGAGG00000021691	SF1	72	85.300	ENSCCAG00000037881	SF1	96	88.235	Cebus_capucinus
ENSGAGG00000021691	SF1	72	85.135	ENSCATG00000011564	SF1	88	92.683	Cercocebus_atys
ENSGAGG00000021691	SF1	72	85.300	ENSCSAG00000007258	SF1	83	89.011	Chlorocebus_sabaeus
ENSGAGG00000021691	SF1	54	84.062	ENSCHOG00000006008	SF1	76	82.716	Choloepus_hoffmanni
ENSGAGG00000021691	SF1	100	91.455	ENSCPBG00000023763	SF1	98	91.455	Chrysemys_picta_bellii
ENSGAGG00000021691	SF1	71	54.960	ENSCSAVG00000009055	-	68	58.937	Ciona_savignyi
ENSGAGG00000021691	SF1	72	85.135	ENSCANG00000042201	SF1	88	92.683	Colobus_angolensis_palliatus
ENSGAGG00000021691	SF1	72	84.942	ENSCGRG00001003677	Sf1	74	89.387	Cricetulus_griseus_chok1gshd
ENSGAGG00000021691	SF1	72	85.078	ENSCGRG00000001708	Sf1	84	88.767	Cricetulus_griseus_crigri
ENSGAGG00000021691	SF1	71	69.364	ENSCSEG00000014375	sf1	60	79.814	Cynoglossus_semilaevis
ENSGAGG00000021691	SF1	68	71.400	ENSCVAG00000001670	sf1	66	82.892	Cyprinodon_variegatus
ENSGAGG00000021691	SF1	70	74.245	ENSDARG00000008188	sf1	77	79.526	Danio_rerio
ENSGAGG00000021691	SF1	72	85.687	ENSDNOG00000001282	SF1	83	89.451	Dasypus_novemcinctus
ENSGAGG00000021691	SF1	72	85.907	ENSDORG00000016334	Sf1	71	89.011	Dipodomys_ordii
ENSGAGG00000021691	SF1	72	78.723	ENSETEG00000012830	SF1	63	80.795	Echinops_telfairi
ENSGAGG00000021691	SF1	72	84.913	ENSEASG00005018272	SF1	83	88.571	Equus_asinus_asinus
ENSGAGG00000021691	SF1	72	85.106	ENSECAG00000024544	SF1	83	88.791	Equus_caballus
ENSGAGG00000021691	SF1	50	89.560	ENSEEUG00000001058	SF1	97	89.474	Erinaceus_europaeus
ENSGAGG00000021691	SF1	71	69.246	ENSELUG00000013225	sf1	57	79.176	Esox_lucius
ENSGAGG00000021691	SF1	72	85.300	ENSFCAG00000012231	SF1	71	89.011	Felis_catus
ENSGAGG00000021691	SF1	57	89.681	ENSFDAG00000009833	SF1	76	89.598	Fukomys_damarensis
ENSGAGG00000021691	SF1	68	70.757	ENSFHEG00000022656	sf1	63	81.119	Fundulus_heteroclitus
ENSGAGG00000021691	SF1	68	69.819	ENSGAFG00000019284	sf1	79	80.523	Gambusia_affinis
ENSGAGG00000021691	SF1	53	81.003	ENSGACG00000000826	sf1	88	65.830	Gasterosteus_aculeatus
ENSGAGG00000021691	SF1	68	71.193	ENSHBUG00000011598	sf1	62	80.324	Haplochromis_burtoni
ENSGAGG00000021691	SF1	72	85.135	ENSHGLG00000009541	SF1	74	89.623	Heterocephalus_glaber_female
ENSGAGG00000021691	SF1	59	88.785	ENSHGLG00100013879	-	80	88.785	Heterocephalus_glaber_male
ENSGAGG00000021691	SF1	60	83.645	ENSHGLG00100008076	-	86	83.924	Heterocephalus_glaber_male
ENSGAGG00000021691	SF1	63	78.112	ENSHGLG00100008255	-	96	75.000	Heterocephalus_glaber_male
ENSGAGG00000021691	SF1	72	85.106	ENSSTOG00000009790	-	72	88.987	Ictidomys_tridecemlineatus
ENSGAGG00000021691	SF1	64	78.431	ENSSTOG00000024353	-	76	75.917	Ictidomys_tridecemlineatus
ENSGAGG00000021691	SF1	72	85.328	ENSJJAG00000011788	Sf1	71	89.231	Jaculus_jaculus
ENSGAGG00000021691	SF1	70	71.657	ENSKMAG00000005854	sf1	64	83.059	Kryptolebias_marmoratus
ENSGAGG00000021691	SF1	66	69.167	ENSLBEG00000019836	sf1	52	85.546	Labrus_bergylta
ENSGAGG00000021691	SF1	53	86.968	ENSLOCG00000002130	sf1	66	83.059	Lepisosteus_oculatus
ENSGAGG00000021691	SF1	72	84.942	ENSLAFG00000007201	SF1	72	89.044	Loxodonta_africana
ENSGAGG00000021691	SF1	72	85.277	ENSMFAG00000033122	SF1	88	92.683	Macaca_fascicularis
ENSGAGG00000021691	SF1	72	85.300	ENSMMUG00000022606	SF1	99	89.630	Macaca_mulatta
ENSGAGG00000021691	SF1	72	85.135	ENSMNEG00000037901	SF1	88	92.683	Macaca_nemestrina
ENSGAGG00000021691	SF1	73	83.932	ENSMLEG00000040706	SF1	90	91.733	Mandrillus_leucophaeus
ENSGAGG00000021691	SF1	68	70.423	ENSMAMG00000001780	sf1	63	80.690	Mastacembelus_armatus
ENSGAGG00000021691	SF1	68	70.988	ENSMZEG00005009196	sf1	62	80.093	Maylandia_zebra
ENSGAGG00000021691	SF1	72	84.942	ENSMAUG00000014064	Sf1	74	89.387	Mesocricetus_auratus
ENSGAGG00000021691	SF1	72	85.907	ENSMICG00000001202	SF1	88	92.432	Microcebus_murinus
ENSGAGG00000021691	SF1	72	85.135	ENSMOCG00000022038	Sf1	74	89.623	Microtus_ochrogaster
ENSGAGG00000021691	SF1	68	70.894	ENSMMOG00000020474	sf1	62	81.818	Mola_mola
ENSGAGG00000021691	SF1	57	90.220	ENSMODG00000029407	SF1	92	89.623	Monodelphis_domestica
ENSGAGG00000021691	SF1	52	84.384	ENSMALG00000020521	sf1	71	82.254	Monopterus_albus
ENSGAGG00000021691	SF1	72	85.714	MGP_CAROLIEiJ_G0022607	Sf1	100	99.251	Mus_caroli
ENSGAGG00000021691	SF1	72	85.714	ENSMUSG00000024949	Sf1	100	99.251	Mus_musculus
ENSGAGG00000021691	SF1	72	85.714	MGP_PahariEiJ_G0014101	Sf1	100	99.251	Mus_pahari
ENSGAGG00000021691	SF1	72	85.714	MGP_SPRETEiJ_G0023518	Sf1	100	99.251	Mus_spretus
ENSGAGG00000021691	SF1	72	85.328	ENSMPUG00000012684	SF1	71	89.231	Mustela_putorius_furo
ENSGAGG00000021691	SF1	62	86.353	ENSMLUG00000029800	-	76	85.586	Myotis_lucifugus
ENSGAGG00000021691	SF1	72	84.749	ENSMLUG00000015217	-	71	89.011	Myotis_lucifugus
ENSGAGG00000021691	SF1	72	85.328	ENSNGAG00000005550	Sf1	74	89.858	Nannospalax_galili
ENSGAGG00000021691	SF1	68	70.902	ENSNBRG00000017606	sf1	63	82.567	Neolamprologus_brichardi
ENSGAGG00000021691	SF1	72	85.742	ENSNLEG00000005236	-	88	92.683	Nomascus_leucogenys
ENSGAGG00000021691	SF1	71	85.658	ENSMEUG00000013424	SF1	85	89.062	Notamacropus_eugenii
ENSGAGG00000021691	SF1	65	84.567	ENSOPRG00000005008	SF1	83	88.564	Ochotona_princeps
ENSGAGG00000021691	SF1	64	86.652	ENSODEG00000006102	-	72	86.593	Octodon_degus
ENSGAGG00000021691	SF1	68	70.782	ENSONIG00000015728	sf1	62	79.861	Oreochromis_niloticus
ENSGAGG00000021691	SF1	55	83.544	ENSOANG00000002909	SF1	96	82.732	Ornithorhynchus_anatinus
ENSGAGG00000021691	SF1	72	85.135	ENSOCUG00000026486	SF1	72	89.011	Oryctolagus_cuniculus
ENSGAGG00000021691	SF1	69	70.825	ENSORLG00000011853	sf1	62	78.972	Oryzias_latipes
ENSGAGG00000021691	SF1	69	70.825	ENSORLG00020011834	sf1	62	78.972	Oryzias_latipes_hni
ENSGAGG00000021691	SF1	68	70.143	ENSORLG00015012855	sf1	62	79.206	Oryzias_latipes_hsok
ENSGAGG00000021691	SF1	70	71.000	ENSOMEG00000005210	sf1	63	80.841	Oryzias_melastigma
ENSGAGG00000021691	SF1	72	85.135	ENSOGAG00000016196	SF1	71	89.011	Otolemur_garnettii
ENSGAGG00000021691	SF1	64	89.059	ENSOARG00000009166	SF1	80	89.011	Ovis_aries
ENSGAGG00000021691	SF1	72	85.185	ENSPPAG00000002799	-	97	88.235	Pan_paniscus
ENSGAGG00000021691	SF1	72	85.300	ENSPPRG00000013566	SF1	72	89.066	Panthera_pardus
ENSGAGG00000021691	SF1	57	90.686	ENSPTIG00000016141	SF1	76	89.623	Panthera_tigris_altaica
ENSGAGG00000021691	SF1	72	85.300	ENSPTRG00000003846	SF1	98	89.499	Pan_troglodytes
ENSGAGG00000021691	SF1	72	85.300	ENSPANG00000020754	SF1	88	92.683	Papio_anubis
ENSGAGG00000021691	SF1	57	98.753	ENSPSIG00000003610	SF1	81	98.753	Pelodiscus_sinensis
ENSGAGG00000021691	SF1	72	85.549	ENSPEMG00000010463	Sf1	74	89.387	Peromyscus_maniculatus_bairdii
ENSGAGG00000021691	SF1	72	85.687	ENSPCIG00000018173	SF1	72	89.231	Phascolarctos_cinereus
ENSGAGG00000021691	SF1	68	71.545	ENSPFOG00000013683	sf1	69	83.855	Poecilia_formosa
ENSGAGG00000021691	SF1	54	82.051	ENSPLAG00000018076	sf1	64	81.119	Poecilia_latipinna
ENSGAGG00000021691	SF1	68	72.521	ENSPMEG00000005726	sf1	65	81.352	Poecilia_mexicana
ENSGAGG00000021691	SF1	68	72.107	ENSPREG00000004155	sf1	62	81.119	Poecilia_reticulata
ENSGAGG00000021691	SF1	72	85.356	ENSPPYG00000003098	-	86	89.011	Pongo_abelii
ENSGAGG00000021691	SF1	72	85.687	ENSPCOG00000027546	SF1	88	92.432	Propithecus_coquereli
ENSGAGG00000021691	SF1	73	85.277	ENSPVAG00000016938	SF1	69	88.889	Pteropus_vampyrus
ENSGAGG00000021691	SF1	68	69.960	ENSPNYG00000004673	sf1	62	80.796	Pundamilia_nyererei
ENSGAGG00000021691	SF1	68	74.897	ENSPNAG00000013072	sf1	62	86.091	Pygocentrus_nattereri
ENSGAGG00000021691	SF1	72	84.942	ENSRNOG00000021085	Sf1	77	87.339	Rattus_norvegicus
ENSGAGG00000021691	SF1	64	89.934	ENSRBIG00000042818	SF1	88	92.412	Rhinopithecus_bieti
ENSGAGG00000021691	SF1	72	84.586	ENSRROG00000045655	SF1	94	88.753	Rhinopithecus_roxellana
ENSGAGG00000021691	SF1	72	70.874	ENSSBOG00000022267	-	97	73.827	Saimiri_boliviensis_boliviensis
ENSGAGG00000021691	SF1	71	72.441	ENSSFOG00015021978	sf1	61	83.059	Scleropages_formosus
ENSGAGG00000021691	SF1	73	69.663	ENSSMAG00000007549	sf1	65	79.724	Scophthalmus_maximus
ENSGAGG00000021691	SF1	68	71.370	ENSSDUG00000003903	sf1	64	82.353	Seriola_dumerili
ENSGAGG00000021691	SF1	68	71.370	ENSSLDG00000013075	sf1	62	82.353	Seriola_lalandi_dorsalis
ENSGAGG00000021691	SF1	72	78.682	ENSSARG00000008180	SF1	88	83.260	Sorex_araneus
ENSGAGG00000021691	SF1	81	88.087	ENSSPUG00000012907	SF1	76	90.244	Sphenodon_punctatus
ENSGAGG00000021691	SF1	71	71.124	ENSSPAG00000019060	sf1	62	81.628	Stegastes_partitus
ENSGAGG00000021691	SF1	72	85.907	ENSSSCG00000013021	SF1	83	89.011	Sus_scrofa
ENSGAGG00000021691	SF1	72	63.238	ENSTNIG00000004820	sf1	81	71.395	Tetraodon_nigroviridis
ENSGAGG00000021691	SF1	64	82.533	ENSTBEG00000013133	SF1	66	82.379	Tupaia_belangeri
ENSGAGG00000021691	SF1	72	80.814	ENSTTRG00000008857	SF1	84	83.921	Tursiops_truncatus
ENSGAGG00000021691	SF1	57	82.396	ENSUAMG00000011977	SF1	66	87.172	Ursus_americanus
ENSGAGG00000021691	SF1	64	91.353	ENSUMAG00000007268	SF1	87	89.011	Ursus_maritimus
ENSGAGG00000021691	SF1	72	85.300	ENSVVUG00000028585	SF1	83	89.011	Vulpes_vulpes
ENSGAGG00000021691	SF1	72	72.605	ENSXETG00000008434	sf1	70	83.738	Xenopus_tropicalis
ENSGAGG00000021691	SF1	51	86.389	ENSXCOG00000003704	sf1	78	83.659	Xiphophorus_couchianus
ENSGAGG00000021691	SF1	68	72.371	ENSXMAG00000007822	sf1	65	81.585	Xiphophorus_maculatus