EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000021744 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 24574 bases
Position: chrPPEB01004091.1:15053-39626
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000030139	APOBEC_N	PF08210.11	3.2e-29	1	1
ENSGAGP00000030140	APOBEC_N	PF08210.11	1e-28	1	1
ENSGAGP00000030139	APOBEC_C	PF05240.14	9.6e-20	1	1
ENSGAGP00000030140	APOBEC_C	PF05240.14	9.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000034217	-	1358	-	ENSGAGP00000030139	256 (aa)	-	-
ENSGAGT00000034218	-	1599	-	ENSGAGP00000030140	255 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000021744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000021744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000021744	-	64	49.697	ENSGAGG00000004947	-	82	49.697
ENSGAGG00000021744	-	72	87.432	ENSGAGG00000006624	-	66	87.432
ENSGAGG00000021744	-	53	35.417	ENSGAGG00000011839	-	70	35.417
ENSGAGG00000021744	-	53	35.417	ENSGAGG00000011838	-	70	35.417
ENSGAGG00000021744	-	67	66.286	ENSGAGG00000021745	-	65	67.429
ENSGAGG00000021744	-	84	44.545	ENSGAGG00000011837	-	87	54.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000021744	-	75	44.041	ENSG00000111701	APOBEC1	81	44.041	Homo_sapiens
ENSGAGG00000021744	-	83	41.509	ENSAMEG00000007098	APOBEC1	89	41.509	Ailuropoda_melanoleuca
ENSGAGG00000021744	-	71	43.094	ENSACAG00000028578	-	99	43.094	Anolis_carolinensis
ENSGAGG00000021744	-	78	42.439	ENSANAG00000027743	APOBEC1	84	40.670	Aotus_nancymaae
ENSGAGG00000021744	-	82	41.148	ENSBTAG00000014683	APOBEC1	88	41.148	Bos_taurus
ENSGAGG00000021744	-	77	42.640	ENSCJAG00000005398	APOBEC1	89	42.640	Callithrix_jacchus
ENSGAGG00000021744	-	77	43.147	ENSCAFG00000013901	APOBEC1	83	43.147	Canis_familiaris
ENSGAGG00000021744	-	77	43.147	ENSCAFG00020003511	APOBEC1	82	43.147	Canis_lupus_dingo
ENSGAGG00000021744	-	84	39.070	ENSCHIG00000011898	APOBEC1	89	39.070	Capra_hircus
ENSGAGG00000021744	-	79	41.379	ENSCAPG00000015882	-	94	41.379	Cavia_aperea
ENSGAGG00000021744	-	79	42.857	ENSCPOG00000033068	APOBEC1	86	42.857	Cavia_porcellus
ENSGAGG00000021744	-	79	42.105	ENSCCAG00000022258	APOBEC1	88	42.105	Cebus_capucinus
ENSGAGG00000021744	-	73	44.385	ENSCATG00000021613	APOBEC1	75	44.385	Cercocebus_atys
ENSGAGG00000021744	-	79	41.667	ENSCLAG00000014645	APOBEC1	88	41.667	Chinchilla_lanigera
ENSGAGG00000021744	-	58	46.667	ENSCSAG00000009817	APOBEC1	79	46.667	Chlorocebus_sabaeus
ENSGAGG00000021744	-	66	85.799	ENSCPBG00000017398	-	74	85.799	Chrysemys_picta_bellii
ENSGAGG00000021744	-	99	70.703	ENSCPBG00000014327	-	99	71.875	Chrysemys_picta_bellii
ENSGAGG00000021744	-	87	45.000	ENSCPBG00000014329	-	65	45.000	Chrysemys_picta_bellii
ENSGAGG00000021744	-	88	76.652	ENSCPBG00000014328	-	99	76.652	Chrysemys_picta_bellii
ENSGAGG00000021744	-	87	41.964	ENSCPBG00000014335	-	91	41.964	Chrysemys_picta_bellii
ENSGAGG00000021744	-	67	47.093	ENSCPBG00000014331	-	71	47.093	Chrysemys_picta_bellii
ENSGAGG00000021744	-	71	46.448	ENSCANG00000038359	APOBEC1	79	46.448	Colobus_angolensis_palliatus
ENSGAGG00000021744	-	74	44.444	ENSCGRG00001011130	Apobec1	82	44.444	Cricetulus_griseus_chok1gshd
ENSGAGG00000021744	-	74	44.444	ENSCGRG00000008644	Apobec1	82	44.444	Cricetulus_griseus_crigri
ENSGAGG00000021744	-	71	43.716	ENSDNOG00000010926	APOBEC1	77	43.716	Dasypus_novemcinctus
ENSGAGG00000021744	-	76	41.327	ENSDORG00000023717	Apobec1	94	40.099	Dipodomys_ordii
ENSGAGG00000021744	-	75	45.361	ENSETEG00000004867	APOBEC1	82	45.361	Echinops_telfairi
ENSGAGG00000021744	-	84	41.121	ENSEASG00005015951	APOBEC1	89	41.121	Equus_asinus_asinus
ENSGAGG00000021744	-	60	46.104	ENSECAG00000017163	APOBEC1	81	46.104	Equus_caballus
ENSGAGG00000021744	-	51	41.860	ENSEEUG00000007530	-	61	41.860	Erinaceus_europaeus
ENSGAGG00000021744	-	75	40.933	ENSEEUG00000009112	-	85	40.933	Erinaceus_europaeus
ENSGAGG00000021744	-	75	44.041	ENSFCAG00000009350	APOBEC1	81	44.041	Felis_catus
ENSGAGG00000021744	-	77	43.448	ENSFALG00000007257	-	90	43.448	Ficedula_albicollis
ENSGAGG00000021744	-	76	43.299	ENSFDAG00000018470	APOBEC1	93	43.299	Fukomys_damarensis
ENSGAGG00000021744	-	79	42.365	ENSHGLG00000001495	APOBEC1	86	42.365	Heterocephalus_glaber_female
ENSGAGG00000021744	-	79	42.365	ENSHGLG00100002187	APOBEC1	86	42.365	Heterocephalus_glaber_male
ENSGAGG00000021744	-	68	37.356	ENSSTOG00000021971	APOBEC1	88	42.529	Ictidomys_tridecemlineatus
ENSGAGG00000021744	-	84	38.710	ENSJJAG00000022108	Apobec1	93	38.710	Jaculus_jaculus
ENSGAGG00000021744	-	78	42.714	ENSLAFG00000030837	APOBEC1	87	42.714	Loxodonta_africana
ENSGAGG00000021744	-	71	46.448	ENSMFAG00000000277	APOBEC1	79	47.333	Macaca_fascicularis
ENSGAGG00000021744	-	71	46.448	ENSMNEG00000029670	APOBEC1	77	46.448	Macaca_nemestrina
ENSGAGG00000021744	-	73	44.385	ENSMLEG00000036301	APOBEC1	79	44.385	Mandrillus_leucophaeus
ENSGAGG00000021744	-	74	43.386	ENSMAUG00000022167	Apobec1	84	43.386	Mesocricetus_auratus
ENSGAGG00000021744	-	76	43.590	ENSMICG00000043645	APOBEC1	83	44.041	Microcebus_murinus
ENSGAGG00000021744	-	77	44.670	ENSMODG00000018004	APOBEC1	83	44.670	Monodelphis_domestica
ENSGAGG00000021744	-	71	43.889	ENSMUSG00000040613	Apobec1	86	40.952	Mus_musculus
ENSGAGG00000021744	-	75	42.632	MGP_PahariEiJ_G0022580	-	86	41.905	Mus_pahari
ENSGAGG00000021744	-	71	43.889	MGP_SPRETEiJ_G0029857	Apobec1	86	40.952	Mus_spretus
ENSGAGG00000021744	-	73	42.246	ENSMPUG00000017532	APOBEC1	79	42.246	Mustela_putorius_furo
ENSGAGG00000021744	-	75	44.560	ENSNGAG00000022607	Apobec1	84	44.560	Nannospalax_galili
ENSGAGG00000021744	-	71	45.902	ENSNLEG00000005342	APOBEC1	77	45.902	Nomascus_leucogenys
ENSGAGG00000021744	-	79	43.350	ENSMEUG00000013406	APOBEC1	85	43.350	Notamacropus_eugenii
ENSGAGG00000021744	-	69	40.571	ENSOPRG00000009508	-	96	40.571	Ochotona_princeps
ENSGAGG00000021744	-	71	43.716	ENSOCUG00000025736	APOBEC1	68	43.716	Oryctolagus_cuniculus
ENSGAGG00000021744	-	78	43.204	ENSOGAG00000026415	APOBEC1	87	43.204	Otolemur_garnettii
ENSGAGG00000021744	-	77	41.117	ENSOARG00000002072	APOBEC1	82	41.117	Ovis_aries
ENSGAGG00000021744	-	81	39.904	ENSPPAG00000027657	APOBEC1	89	38.208	Pan_paniscus
ENSGAGG00000021744	-	75	44.041	ENSPPRG00000012182	APOBEC1	81	44.041	Panthera_pardus
ENSGAGG00000021744	-	75	44.041	ENSPTIG00000020280	APOBEC1	81	44.041	Panthera_tigris_altaica
ENSGAGG00000021744	-	71	45.902	ENSPTRG00000004614	APOBEC1	77	45.902	Pan_troglodytes
ENSGAGG00000021744	-	71	46.448	ENSPANG00000021027	APOBEC1	77	46.448	Papio_anubis
ENSGAGG00000021744	-	50	72.816	ENSPSIG00000012791	-	70	72.816	Pelodiscus_sinensis
ENSGAGG00000021744	-	68	78.035	ENSPSIG00000012568	-	75	78.035	Pelodiscus_sinensis
ENSGAGG00000021744	-	71	46.667	ENSPEMG00000023841	Apobec1	78	46.667	Peromyscus_maniculatus_bairdii
ENSGAGG00000021744	-	79	41.089	ENSPCIG00000023973	APOBEC1	85	41.089	Phascolarctos_cinereus
ENSGAGG00000021744	-	77	42.132	ENSPPYG00000004228	APOBEC1	79	42.132	Pongo_abelii
ENSGAGG00000021744	-	63	44.720	ENSPCAG00000008733	APOBEC1	86	44.720	Procavia_capensis
ENSGAGG00000021744	-	75	44.560	ENSPCOG00000013957	APOBEC1	85	44.560	Propithecus_coquereli
ENSGAGG00000021744	-	71	41.667	ENSRNOG00000015411	Apobec1	78	41.667	Rattus_norvegicus
ENSGAGG00000021744	-	71	46.995	ENSRBIG00000031161	APOBEC1	77	46.995	Rhinopithecus_bieti
ENSGAGG00000021744	-	71	46.995	ENSRROG00000033576	APOBEC1	79	48.000	Rhinopithecus_roxellana
ENSGAGG00000021744	-	67	44.444	ENSSBOG00000030587	APOBEC1	96	44.444	Saimiri_boliviensis_boliviensis
ENSGAGG00000021744	-	77	43.655	ENSSHAG00000008925	APOBEC1	86	43.655	Sarcophilus_harrisii
ENSGAGG00000021744	-	67	43.275	ENSSARG00000000032	-	99	43.275	Sorex_araneus
ENSGAGG00000021744	-	52	44.697	ENSSARG00000011972	-	99	44.697	Sorex_araneus
ENSGAGG00000021744	-	87	39.910	ENSSPUG00000009044	-	86	39.910	Sphenodon_punctatus
ENSGAGG00000021744	-	79	42.584	ENSSSCG00000000668	APOBEC1	87	42.584	Sus_scrofa
ENSGAGG00000021744	-	56	46.479	ENSTGUG00000013118	-	97	46.479	Taeniopygia_guttata
ENSGAGG00000021744	-	76	42.347	ENSTBEG00000010043	APOBEC1	82	42.347	Tupaia_belangeri
ENSGAGG00000021744	-	70	41.530	ENSTTRG00000014015	APOBEC1	97	41.530	Tursiops_truncatus
ENSGAGG00000021744	-	85	40.183	ENSUAMG00000011636	APOBEC1	89	40.183	Ursus_americanus
ENSGAGG00000021744	-	88	39.111	ENSUMAG00000016552	APOBEC1	92	39.111	Ursus_maritimus
ENSGAGG00000021744	-	77	39.086	ENSVPAG00000001343	APOBEC1	83	39.086	Vicugna_pacos
ENSGAGG00000021744	-	77	45.178	ENSVVUG00000010522	APOBEC1	83	45.178	Vulpes_vulpes