EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000021745 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 22783 bases
Position: chrPPEB01004091.1:16684-39466
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000030141	APOBEC_N	PF08210.11	2.5e-28	1	1
ENSGAGP00000030142	APOBEC_N	PF08210.11	2.5e-28	1	1
ENSGAGP00000030141	APOBEC_C	PF05240.14	8.6e-21	1	1
ENSGAGP00000030142	APOBEC_C	PF05240.14	8.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000034220	-	2067	-	ENSGAGP00000030142	271 (aa)	-	-
ENSGAGT00000034219	-	1854	-	ENSGAGP00000030141	271 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000021745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000021745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000021745	-	63	49.419	ENSGAGG00000004947	-	84	49.419
ENSGAGG00000021745	-	66	49.194	ENSGAGG00000011837	-	85	51.818
ENSGAGG00000021745	-	65	67.429	ENSGAGG00000021744	-	67	66.286
ENSGAGG00000021745	-	72	70.408	ENSGAGG00000006624	-	70	68.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000021745	-	64	42.373	ENSG00000111701	APOBEC1	72	42.373	Homo_sapiens
ENSGAGG00000021745	-	64	42.529	ENSAMEG00000007098	APOBEC1	72	42.529	Ailuropoda_melanoleuca
ENSGAGG00000021745	-	68	43.784	ENSACAG00000028578	-	99	43.784	Anolis_carolinensis
ENSGAGG00000021745	-	69	41.753	ENSANAG00000027743	APOBEC1	76	41.753	Aotus_nancymaae
ENSGAGG00000021745	-	64	41.379	ENSBTAG00000014683	APOBEC1	72	41.379	Bos_taurus
ENSGAGG00000021745	-	64	44.318	ENSCJAG00000005398	APOBEC1	77	44.318	Callithrix_jacchus
ENSGAGG00000021745	-	68	41.530	ENSCAFG00000013901	APOBEC1	76	41.530	Canis_familiaris
ENSGAGG00000021745	-	66	42.697	ENSCAFG00020003511	APOBEC1	73	42.697	Canis_lupus_dingo
ENSGAGG00000021745	-	78	37.838	ENSCHIG00000011898	APOBEC1	94	35.426	Capra_hircus
ENSGAGG00000021745	-	64	40.805	ENSCAPG00000015882	-	79	40.805	Cavia_aperea
ENSGAGG00000021745	-	70	38.421	ENSCPOG00000033068	APOBEC1	79	38.421	Cavia_porcellus
ENSGAGG00000021745	-	64	44.886	ENSCCAG00000022258	APOBEC1	72	44.886	Cebus_capucinus
ENSGAGG00000021745	-	69	42.051	ENSCATG00000021613	APOBEC1	76	42.051	Cercocebus_atys
ENSGAGG00000021745	-	68	40.437	ENSCLAG00000014645	APOBEC1	78	40.437	Chinchilla_lanigera
ENSGAGG00000021745	-	68	52.174	ENSCPBG00000014329	-	50	52.174	Chrysemys_picta_bellii
ENSGAGG00000021745	-	65	72.571	ENSCPBG00000014328	-	76	70.857	Chrysemys_picta_bellii
ENSGAGG00000021745	-	74	81.159	ENSCPBG00000014327	-	81	79.710	Chrysemys_picta_bellii
ENSGAGG00000021745	-	77	73.810	ENSCPBG00000017398	-	92	72.381	Chrysemys_picta_bellii
ENSGAGG00000021745	-	65	48.023	ENSCPBG00000014335	-	71	46.893	Chrysemys_picta_bellii
ENSGAGG00000021745	-	67	48.901	ENSCPBG00000014331	-	80	45.355	Chrysemys_picta_bellii
ENSGAGG00000021745	-	64	44.068	ENSCANG00000038359	APOBEC1	74	44.068	Colobus_angolensis_palliatus
ENSGAGG00000021745	-	64	41.379	ENSCGRG00001011130	Apobec1	74	41.379	Cricetulus_griseus_chok1gshd
ENSGAGG00000021745	-	64	41.379	ENSCGRG00000008644	Apobec1	74	41.379	Cricetulus_griseus_crigri
ENSGAGG00000021745	-	70	40.526	ENSDNOG00000010926	APOBEC1	79	40.526	Dasypus_novemcinctus
ENSGAGG00000021745	-	64	36.782	ENSDORG00000023717	Apobec1	80	36.782	Dipodomys_ordii
ENSGAGG00000021745	-	80	39.241	ENSETEG00000004867	APOBEC1	94	39.565	Echinops_telfairi
ENSGAGG00000021745	-	69	39.791	ENSEASG00005015951	APOBEC1	79	39.791	Equus_asinus_asinus
ENSGAGG00000021745	-	64	41.379	ENSEEUG00000009112	-	76	39.655	Erinaceus_europaeus
ENSGAGG00000021745	-	68	42.077	ENSFCAG00000009350	APOBEC1	76	42.077	Felis_catus
ENSGAGG00000021745	-	66	44.521	ENSFALG00000007257	-	81	45.455	Ficedula_albicollis
ENSGAGG00000021745	-	60	41.975	ENSFDAG00000018470	APOBEC1	76	41.975	Fukomys_damarensis
ENSGAGG00000021745	-	69	41.885	ENSHGLG00000001495	APOBEC1	79	41.885	Heterocephalus_glaber_female
ENSGAGG00000021745	-	64	43.429	ENSHGLG00100002187	APOBEC1	72	43.429	Heterocephalus_glaber_male
ENSGAGG00000021745	-	67	40.110	ENSJJAG00000022108	Apobec1	81	39.153	Jaculus_jaculus
ENSGAGG00000021745	-	76	36.866	ENSLAFG00000030837	APOBEC1	96	36.866	Loxodonta_africana
ENSGAGG00000021745	-	64	43.503	ENSMFAG00000000277	APOBEC1	72	43.503	Macaca_fascicularis
ENSGAGG00000021745	-	64	43.503	ENSMNEG00000029670	APOBEC1	72	43.503	Macaca_nemestrina
ENSGAGG00000021745	-	64	43.503	ENSMLEG00000036301	APOBEC1	72	43.503	Mandrillus_leucophaeus
ENSGAGG00000021745	-	64	41.618	ENSMAUG00000022167	Apobec1	76	41.618	Mesocricetus_auratus
ENSGAGG00000021745	-	64	41.379	ENSMICG00000043645	APOBEC1	74	41.379	Microcebus_murinus
ENSGAGG00000021745	-	66	42.553	ENSMODG00000018004	APOBEC1	83	41.089	Monodelphis_domestica
ENSGAGG00000021745	-	64	42.529	ENSMUSG00000040613	Apobec1	86	41.905	Mus_musculus
ENSGAGG00000021745	-	64	43.103	MGP_PahariEiJ_G0022580	-	86	42.857	Mus_pahari
ENSGAGG00000021745	-	64	42.529	MGP_SPRETEiJ_G0029857	Apobec1	86	41.905	Mus_spretus
ENSGAGG00000021745	-	68	39.344	ENSMPUG00000017532	APOBEC1	76	39.344	Mustela_putorius_furo
ENSGAGG00000021745	-	68	40.437	ENSNGAG00000022607	Apobec1	78	40.437	Nannospalax_galili
ENSGAGG00000021745	-	64	42.373	ENSNLEG00000005342	APOBEC1	72	42.373	Nomascus_leucogenys
ENSGAGG00000021745	-	77	37.799	ENSMEUG00000013406	APOBEC1	85	37.799	Notamacropus_eugenii
ENSGAGG00000021745	-	68	37.838	ENSOPRG00000009508	-	99	36.757	Ochotona_princeps
ENSGAGG00000021745	-	64	40.113	ENSOCUG00000025736	APOBEC1	64	40.113	Oryctolagus_cuniculus
ENSGAGG00000021745	-	69	39.572	ENSOGAG00000026415	APOBEC1	78	39.572	Otolemur_garnettii
ENSGAGG00000021745	-	78	37.838	ENSOARG00000002072	APOBEC1	91	37.838	Ovis_aries
ENSGAGG00000021745	-	64	41.379	ENSPPAG00000027657	APOBEC1	70	41.379	Pan_paniscus
ENSGAGG00000021745	-	68	42.077	ENSPPRG00000012182	APOBEC1	76	42.077	Panthera_pardus
ENSGAGG00000021745	-	68	42.077	ENSPTIG00000020280	APOBEC1	76	42.077	Panthera_tigris_altaica
ENSGAGG00000021745	-	64	42.373	ENSPTRG00000004614	APOBEC1	72	42.373	Pan_troglodytes
ENSGAGG00000021745	-	64	43.503	ENSPANG00000021027	APOBEC1	72	43.503	Papio_anubis
ENSGAGG00000021745	-	72	64.796	ENSPSIG00000012568	-	84	63.265	Pelodiscus_sinensis
ENSGAGG00000021745	-	51	64.078	ENSPSIG00000012791	-	69	64.948	Pelodiscus_sinensis
ENSGAGG00000021745	-	64	44.253	ENSPEMG00000023841	Apobec1	74	44.253	Peromyscus_maniculatus_bairdii
ENSGAGG00000021745	-	68	40.984	ENSPCIG00000023973	APOBEC1	76	41.530	Phascolarctos_cinereus
ENSGAGG00000021745	-	69	42.347	ENSPPYG00000004228	APOBEC1	76	41.538	Pongo_abelii
ENSGAGG00000021745	-	68	39.344	ENSPCAG00000008733	APOBEC1	96	39.344	Procavia_capensis
ENSGAGG00000021745	-	64	40.805	ENSPCOG00000013957	APOBEC1	75	40.805	Propithecus_coquereli
ENSGAGG00000021745	-	64	40.805	ENSRNOG00000015411	Apobec1	74	40.805	Rattus_norvegicus
ENSGAGG00000021745	-	64	43.750	ENSRBIG00000031161	APOBEC1	72	43.750	Rhinopithecus_bieti
ENSGAGG00000021745	-	64	43.750	ENSRROG00000033576	APOBEC1	73	45.070	Rhinopithecus_roxellana
ENSGAGG00000021745	-	64	44.318	ENSSBOG00000030587	APOBEC1	96	44.318	Saimiri_boliviensis_boliviensis
ENSGAGG00000021745	-	64	43.678	ENSSHAG00000008925	APOBEC1	75	43.678	Sarcophilus_harrisii
ENSGAGG00000021745	-	64	41.477	ENSSARG00000000032	-	99	41.477	Sorex_araneus
ENSGAGG00000021745	-	67	47.253	ENSSPUG00000009044	-	69	46.703	Sphenodon_punctatus
ENSGAGG00000021745	-	64	43.103	ENSSSCG00000000668	APOBEC1	72	43.103	Sus_scrofa
ENSGAGG00000021745	-	53	48.252	ENSTGUG00000013118	-	98	48.252	Taeniopygia_guttata
ENSGAGG00000021745	-	64	40.678	ENSTBEG00000010043	APOBEC1	72	40.678	Tupaia_belangeri
ENSGAGG00000021745	-	68	39.891	ENSTTRG00000014015	APOBEC1	96	39.891	Tursiops_truncatus
ENSGAGG00000021745	-	64	40.805	ENSUAMG00000011636	APOBEC1	70	40.805	Ursus_americanus
ENSGAGG00000021745	-	64	40.805	ENSUMAG00000016552	APOBEC1	70	40.805	Ursus_maritimus
ENSGAGG00000021745	-	64	40.462	ENSVPAG00000001343	APOBEC1	72	40.462	Vicugna_pacos
ENSGAGG00000021745	-	68	41.530	ENSVVUG00000010522	APOBEC1	76	41.530	Vulpes_vulpes