EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000021832 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 7810 bases
Position: chrPPEB01002249.1:240674-248483
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000030295	PPR	PF01535.20	2.9e-15	1	2
ENSGAGP00000030295	PPR	PF01535.20	2.9e-15	2	2
ENSGAGP00000030293	PPR	PF01535.20	4.3e-15	1	2
ENSGAGP00000030293	PPR	PF01535.20	4.3e-15	2	2
ENSGAGP00000030296	PPR	PF01535.20	4.3e-15	1	2
ENSGAGP00000030296	PPR	PF01535.20	4.3e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000034381	-	2613	-	ENSGAGP00000030293	685 (aa)	-	-
ENSGAGT00000034383	-	2535	-	ENSGAGP00000030295	659 (aa)	-	-
ENSGAGT00000034384	-	2343	-	ENSGAGP00000030296	685 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000021832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000021832's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000021832	-	99	54.573	ENSG00000248919	ATP5MF-PTCD1	86	54.273	Homo_sapiens
ENSGAGG00000021832	-	99	54.573	ENSG00000106246	PTCD1	92	54.273	Homo_sapiens
ENSGAGG00000021832	-	85	47.173	ENSAPOG00000010679	ptcd1	86	47.173	Acanthochromis_polyacanthus
ENSGAGG00000021832	-	87	61.604	ENSAMEG00000006224	-	76	61.604	Ailuropoda_melanoleuca
ENSGAGG00000021832	-	98	43.446	ENSACIG00000017861	ptcd1	92	44.060	Amphilophus_citrinellus
ENSGAGG00000021832	-	85	46.998	ENSAOCG00000020741	-	78	47.425	Amphiprion_ocellaris
ENSGAGG00000021832	-	84	47.578	ENSAOCG00000022617	ptcd1	82	48.029	Amphiprion_ocellaris
ENSGAGG00000021832	-	85	46.701	ENSAPEG00000022632	ptcd1	78	47.425	Amphiprion_percula
ENSGAGG00000021832	-	86	47.739	ENSATEG00000007016	ptcd1	79	48.866	Anabas_testudineus
ENSGAGG00000021832	-	85	69.588	ENSAPLG00000006862	-	90	68.870	Anas_platyrhynchos
ENSGAGG00000021832	-	91	64.570	ENSACAG00000012871	-	80	64.404	Anolis_carolinensis
ENSGAGG00000021832	-	100	52.819	ENSANAG00000035790	-	94	52.880	Aotus_nancymaae
ENSGAGG00000021832	-	85	46.610	ENSACLG00000002824	ptcd1	77	47.359	Astatotilapia_calliptera
ENSGAGG00000021832	-	88	49.920	ENSAMXG00000037292	ptcd1	88	50.968	Astyanax_mexicanus
ENSGAGG00000021832	-	99	52.975	ENSBTAG00000020440	-	75	57.561	Bos_taurus
ENSGAGG00000021832	-	100	53.938	ENSCJAG00000015815	-	92	53.789	Callithrix_jacchus
ENSGAGG00000021832	-	100	56.380	ENSCAFG00000015055	-	86	56.380	Canis_familiaris
ENSGAGG00000021832	-	100	56.380	ENSCAFG00020014480	-	86	56.380	Canis_lupus_dingo
ENSGAGG00000021832	-	91	56.778	ENSCHIG00000027000	-	85	57.591	Capra_hircus
ENSGAGG00000021832	-	84	61.131	ENSTSYG00000029495	-	83	60.000	Carlito_syrichta
ENSGAGG00000021832	-	84	59.507	ENSCAPG00000014660	-	88	58.404	Cavia_aperea
ENSGAGG00000021832	-	84	60.739	ENSCPOG00000001780	-	82	59.593	Cavia_porcellus
ENSGAGG00000021832	-	84	58.741	ENSCCAG00000034025	-	92	53.372	Cebus_capucinus
ENSGAGG00000021832	-	100	54.451	ENSCATG00000040859	-	92	54.681	Cercocebus_atys
ENSGAGG00000021832	-	85	59.898	ENSCLAG00000006354	-	82	59.762	Chinchilla_lanigera
ENSGAGG00000021832	-	99	55.322	ENSCSAG00000017794	-	95	55.022	Chlorocebus_sabaeus
ENSGAGG00000021832	-	100	90.552	ENSCPBG00000020866	-	93	90.262	Chrysemys_picta_bellii
ENSGAGG00000021832	-	63	41.150	ENSCING00000007717	-	73	41.593	Ciona_intestinalis
ENSGAGG00000021832	-	99	54.383	ENSCANG00000023441	-	92	54.383	Colobus_angolensis_palliatus
ENSGAGG00000021832	-	85	60.522	ENSCGRG00001023686	Ptcd1	81	60.348	Cricetulus_griseus_chok1gshd
ENSGAGG00000021832	-	85	60.522	ENSCGRG00000015031	Ptcd1	81	60.348	Cricetulus_griseus_crigri
ENSGAGG00000021832	-	86	44.020	ENSCSEG00000002378	ptcd1	78	44.637	Cynoglossus_semilaevis
ENSGAGG00000021832	-	85	48.797	ENSCVAG00000015826	ptcd1	78	48.841	Cyprinodon_variegatus
ENSGAGG00000021832	-	85	48.454	ENSCVAG00000003621	ptcd1	85	47.579	Cyprinodon_variegatus
ENSGAGG00000021832	-	92	48.960	ENSDARG00000076176	ptcd1	87	48.320	Danio_rerio
ENSGAGG00000021832	-	99	53.582	ENSDNOG00000009957	-	92	53.561	Dasypus_novemcinctus
ENSGAGG00000021832	-	100	55.556	ENSDORG00000000740	Ptcd1	93	55.704	Dipodomys_ordii
ENSGAGG00000021832	-	85	39.326	ENSEBUG00000014515	ptcd1	91	40.959	Eptatretus_burgeri
ENSGAGG00000021832	-	85	59.694	ENSEASG00005002480	-	82	60.406	Equus_asinus_asinus
ENSGAGG00000021832	-	85	59.864	ENSECAG00000016617	-	84	61.092	Equus_caballus
ENSGAGG00000021832	-	86	46.053	ENSELUG00000016517	ptcd1	79	46.053	Esox_lucius
ENSGAGG00000021832	-	99	56.213	ENSFCAG00000015069	-	92	56.509	Felis_catus
ENSGAGG00000021832	-	90	68.336	ENSFALG00000013803	-	85	68.821	Ficedula_albicollis
ENSGAGG00000021832	-	84	60.071	ENSFDAG00000006393	-	82	58.234	Fukomys_damarensis
ENSGAGG00000021832	-	76	46.641	ENSFHEG00000012491	ptcd1	84	46.641	Fundulus_heteroclitus
ENSGAGG00000021832	-	82	47.834	ENSGMOG00000007639	ptcd1	87	47.834	Gadus_morhua
ENSGAGG00000021832	-	85	70.840	ENSGALG00000004711	-	92	65.663	Gallus_gallus
ENSGAGG00000021832	-	85	46.337	ENSGAFG00000013175	ptcd1	79	47.080	Gambusia_affinis
ENSGAGG00000021832	-	85	48.294	ENSGACG00000016607	ptcd1	85	48.772	Gasterosteus_aculeatus
ENSGAGG00000021832	-	99	54.573	ENSGGOG00000015123	-	92	54.273	Gorilla_gorilla
ENSGAGG00000021832	-	85	46.441	ENSHBUG00000018275	ptcd1	77	47.183	Haplochromis_burtoni
ENSGAGG00000021832	-	85	60.445	ENSHGLG00000017621	-	85	59.016	Heterocephalus_glaber_female
ENSGAGG00000021832	-	85	60.445	ENSHGLG00100007218	-	85	59.016	Heterocephalus_glaber_male
ENSGAGG00000021832	-	88	44.868	ENSHCOG00000010784	ptcd1	81	44.750	Hippocampus_comes
ENSGAGG00000021832	-	90	57.661	ENSSTOG00000001682	-	83	57.661	Ictidomys_tridecemlineatus
ENSGAGG00000021832	-	84	61.770	ENSJJAG00000000319	Ptcd1	81	62.191	Jaculus_jaculus
ENSGAGG00000021832	-	84	47.163	ENSKMAG00000008708	ptcd1	77	47.163	Kryptolebias_marmoratus
ENSGAGG00000021832	-	88	46.296	ENSLBEG00000008061	ptcd1	79	46.633	Labrus_bergylta
ENSGAGG00000021832	-	91	59.211	ENSLACG00000011172	ptcd1	85	59.211	Latimeria_chalumnae
ENSGAGG00000021832	-	85	57.596	ENSLOCG00000004833	ptcd1	89	54.720	Lepisosteus_oculatus
ENSGAGG00000021832	-	85	58.944	ENSLAFG00000002588	-	80	58.773	Loxodonta_africana
ENSGAGG00000021832	-	100	54.438	ENSMFAG00000041324	-	92	54.681	Macaca_fascicularis
ENSGAGG00000021832	-	100	54.315	ENSMMUG00000030408	-	92	54.532	Macaca_mulatta
ENSGAGG00000021832	-	100	54.586	ENSMNEG00000043786	-	92	54.829	Macaca_nemestrina
ENSGAGG00000021832	-	100	40.208	ENSMLEG00000031179	-	91	42.496	Mandrillus_leucophaeus
ENSGAGG00000021832	-	97	46.851	ENSMAMG00000007623	ptcd1	87	46.851	Mastacembelus_armatus
ENSGAGG00000021832	-	85	47.109	ENSMZEG00005012722	ptcd1	77	47.359	Maylandia_zebra
ENSGAGG00000021832	-	84	69.965	ENSMGAG00000004211	-	74	69.965	Meleagris_gallopavo
ENSGAGG00000021832	-	84	58.979	ENSMICG00000017428	-	86	58.333	Microcebus_murinus
ENSGAGG00000021832	-	85	47.423	ENSMMOG00000020243	ptcd1	85	47.735	Mola_mola
ENSGAGG00000021832	-	100	56.710	ENSMODG00000001350	-	93	56.710	Monodelphis_domestica
ENSGAGG00000021832	-	88	47.386	ENSMALG00000018442	ptcd1	79	47.218	Monopterus_albus
ENSGAGG00000021832	-	93	56.640	MGP_CAROLIEiJ_G0028011	Ptcd1	88	56.640	Mus_caroli
ENSGAGG00000021832	-	93	56.960	ENSMUSG00000029624	Ptcd1	88	56.960	Mus_musculus
ENSGAGG00000021832	-	93	57.440	MGP_PahariEiJ_G0024580	Ptcd1	88	57.440	Mus_pahari
ENSGAGG00000021832	-	93	56.960	MGP_SPRETEiJ_G0029012	Ptcd1	88	56.960	Mus_spretus
ENSGAGG00000021832	-	87	60.544	ENSMPUG00000016518	-	82	61.345	Mustela_putorius_furo
ENSGAGG00000021832	-	85	60.406	ENSMLUG00000010994	-	86	56.268	Myotis_lucifugus
ENSGAGG00000021832	-	85	46.701	ENSNBRG00000010079	ptcd1	80	47.619	Neolamprologus_brichardi
ENSGAGG00000021832	-	75	59.761	ENSNLEG00000011060	-	84	59.761	Nomascus_leucogenys
ENSGAGG00000021832	-	100	53.736	ENSMEUG00000006930	-	93	53.592	Notamacropus_eugenii
ENSGAGG00000021832	-	77	57.037	ENSOPRG00000013647	-	72	63.636	Ochotona_princeps
ENSGAGG00000021832	-	85	44.932	ENSONIG00000003168	ptcd1	91	45.775	Oreochromis_niloticus
ENSGAGG00000021832	-	96	54.264	ENSOANG00000007728	-	85	53.233	Ornithorhynchus_anatinus
ENSGAGG00000021832	-	85	59.455	ENSOCUG00000010584	-	80	58.685	Oryctolagus_cuniculus
ENSGAGG00000021832	-	89	47.059	ENSORLG00000009275	ptcd1	82	47.128	Oryzias_latipes
ENSGAGG00000021832	-	89	46.895	ENSORLG00020000988	ptcd1	82	46.895	Oryzias_latipes_hni
ENSGAGG00000021832	-	99	44.109	ENSORLG00015010557	ptcd1	90	44.006	Oryzias_latipes_hsok
ENSGAGG00000021832	-	85	47.513	ENSOMEG00000020627	ptcd1	82	48.221	Oryzias_melastigma
ENSGAGG00000021832	-	91	55.682	ENSOGAG00000010877	-	88	56.290	Otolemur_garnettii
ENSGAGG00000021832	-	91	52.351	ENSOARG00000018676	-	86	53.074	Ovis_aries
ENSGAGG00000021832	-	99	54.873	ENSPPAG00000036024	-	92	54.573	Pan_paniscus
ENSGAGG00000021832	-	88	60.396	ENSPPRG00000003478	-	83	61.395	Panthera_pardus
ENSGAGG00000021832	-	99	55.022	ENSPTRG00000019452	-	92	54.723	Pan_troglodytes
ENSGAGG00000021832	-	100	54.599	ENSPANG00000016730	-	92	54.829	Papio_anubis
ENSGAGG00000021832	-	91	50.984	ENSPKIG00000014215	ptcd1	87	51.550	Paramormyrops_kingsleyae
ENSGAGG00000021832	-	85	81.034	ENSPSIG00000011184	-	94	81.034	Pelodiscus_sinensis
ENSGAGG00000021832	-	76	39.163	ENSPMAG00000009667	ptcd1	97	39.692	Petromyzon_marinus
ENSGAGG00000021832	-	98	57.164	ENSPCIG00000024778	-	90	57.310	Phascolarctos_cinereus
ENSGAGG00000021832	-	84	45.890	ENSPFOG00000004458	ptcd1	78	46.561	Poecilia_formosa
ENSGAGG00000021832	-	84	46.299	ENSPLAG00000011051	ptcd1	79	46.737	Poecilia_latipinna
ENSGAGG00000021832	-	84	46.918	ENSPMEG00000020547	ptcd1	78	47.007	Poecilia_mexicana
ENSGAGG00000021832	-	84	46.299	ENSPREG00000000059	ptcd1	79	46.561	Poecilia_reticulata
ENSGAGG00000021832	-	91	57.119	ENSPPYG00000017377	-	91	56.792	Pongo_abelii
ENSGAGG00000021832	-	77	59.701	ENSPCAG00000001852	-	79	58.955	Procavia_capensis
ENSGAGG00000021832	-	84	58.217	ENSPCOG00000018596	-	82	59.075	Propithecus_coquereli
ENSGAGG00000021832	-	70	73.000	ENSPVAG00000007529	-	69	73.000	Pteropus_vampyrus
ENSGAGG00000021832	-	85	46.769	ENSPNYG00000019993	ptcd1	77	47.527	Pundamilia_nyererei
ENSGAGG00000021832	-	88	51.067	ENSPNAG00000014931	ptcd1	86	51.047	Pygocentrus_nattereri
ENSGAGG00000021832	-	84	62.014	ENSRNOG00000000987	Ptcd1	84	60.714	Rattus_norvegicus
ENSGAGG00000021832	-	99	54.532	ENSRBIG00000043393	-	92	54.532	Rhinopithecus_bieti
ENSGAGG00000021832	-	99	54.478	ENSRROG00000036420	-	92	54.478	Rhinopithecus_roxellana
ENSGAGG00000021832	-	100	53.720	ENSSBOG00000024114	-	92	53.481	Saimiri_boliviensis_boliviensis
ENSGAGG00000021832	-	99	55.912	ENSSHAG00000011376	-	91	58.266	Sarcophilus_harrisii
ENSGAGG00000021832	-	85	56.971	ENSSFOG00015007909	ptcd1	77	55.892	Scleropages_formosus
ENSGAGG00000021832	-	84	46.575	ENSSMAG00000000218	ptcd1	86	46.786	Scophthalmus_maximus
ENSGAGG00000021832	-	91	46.504	ENSSDUG00000015671	ptcd1	86	45.854	Seriola_dumerili
ENSGAGG00000021832	-	89	46.602	ENSSLDG00000014261	ptcd1	81	46.477	Seriola_lalandi_dorsalis
ENSGAGG00000021832	-	100	67.489	ENSSPUG00000003540	-	93	67.489	Sphenodon_punctatus
ENSGAGG00000021832	-	88	45.910	ENSSPAG00000011049	ptcd1	79	46.578	Stegastes_partitus
ENSGAGG00000021832	-	84	59.895	ENSSSCG00000007622	-	87	58.209	Sus_scrofa
ENSGAGG00000021832	-	85	69.191	ENSTGUG00000007563	-	91	69.821	Taeniopygia_guttata
ENSGAGG00000021832	-	85	46.404	ENSTRUG00000013471	ptcd1	76	46.690	Takifugu_rubripes
ENSGAGG00000021832	-	84	48.063	ENSTNIG00000008271	ptcd1	80	48.063	Tetraodon_nigroviridis
ENSGAGG00000021832	-	91	57.912	ENSTBEG00000011021	-	86	57.749	Tupaia_belangeri
ENSGAGG00000021832	-	93	54.803	ENSTTRG00000003006	-	88	54.803	Tursiops_truncatus
ENSGAGG00000021832	-	87	60.751	ENSUAMG00000008049	-	82	61.263	Ursus_americanus
ENSGAGG00000021832	-	100	56.909	ENSVVUG00000008836	-	92	56.909	Vulpes_vulpes
ENSGAGG00000021832	-	93	53.023	ENSXETG00000009891	ptcd1	88	52.868	Xenopus_tropicalis
ENSGAGG00000021832	-	83	47.237	ENSXMAG00000015540	ptcd1	78	47.257	Xiphophorus_maculatus