EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000021879 (Gene tree)
Gene ID: -
Gene Symbol: URB2
Alias: KIAA0133|NET10|NPA2
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 26702 bases
Position: chrPPEB01000343.1:521313-548014
Accession: 28967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000030369	Urb2	PF10441.9	5.7e-24	1	1
ENSGAGP00000030367	Urb2	PF10441.9	5.8e-24	1	1
ENSGAGP00000030372	Urb2	PF10441.9	5.8e-24	1	1
ENSGAGP00000030373	Urb2	PF10441.9	5.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000034464	URB2-201	4749	-	ENSGAGP00000030367	1551 (aa)	-	-
ENSGAGT00000034472	URB2-205	4578	-	ENSGAGP00000030375	1413 (aa)	-	-
ENSGAGT00000034466	URB2-202	4638	-	ENSGAGP00000030369	1514 (aa)	-	-
ENSGAGT00000034470	URB2-204	4821	-	ENSGAGP00000030373	1494 (aa)	-	-
ENSGAGT00000034469	URB2-203	4744	-	ENSGAGP00000030372	1551 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000021879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000021879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000021879	URB2	100	55.491	ENSG00000135763	URB2	99	75.000	Homo_sapiens
ENSGAGG00000021879	URB2	89	38.863	ENSAPOG00000000608	urb2	95	38.930	Acanthochromis_polyacanthus
ENSGAGG00000021879	URB2	99	54.172	ENSAMEG00000009206	URB2	99	54.172	Ailuropoda_melanoleuca
ENSGAGG00000021879	URB2	99	38.159	ENSAOCG00000019961	urb2	99	38.335	Amphiprion_ocellaris
ENSGAGG00000021879	URB2	99	38.132	ENSAPEG00000005263	urb2	99	38.308	Amphiprion_percula
ENSGAGG00000021879	URB2	99	38.448	ENSATEG00000020930	urb2	99	38.783	Anabas_testudineus
ENSGAGG00000021879	URB2	97	68.758	ENSAPLG00000002998	URB2	100	68.758	Anas_platyrhynchos
ENSGAGG00000021879	URB2	100	63.707	ENSACAG00000001285	URB2	100	63.707	Anolis_carolinensis
ENSGAGG00000021879	URB2	100	54.936	ENSANAG00000033963	URB2	100	54.936	Aotus_nancymaae
ENSGAGG00000021879	URB2	89	37.695	ENSACLG00000009254	urb2	95	37.695	Astatotilapia_calliptera
ENSGAGG00000021879	URB2	100	39.911	ENSAMXG00000003474	urb2	100	39.784	Astyanax_mexicanus
ENSGAGG00000021879	URB2	99	51.155	ENSBTAG00000010180	URB2	99	51.155	Bos_taurus
ENSGAGG00000021879	URB2	95	76.923	ENSCJAG00000010968	URB2	100	73.944	Callithrix_jacchus
ENSGAGG00000021879	URB2	100	54.242	ENSCAFG00000012118	URB2	100	54.242	Canis_familiaris
ENSGAGG00000021879	URB2	94	53.187	ENSCAFG00020027217	URB2	99	53.187	Canis_lupus_dingo
ENSGAGG00000021879	URB2	100	49.967	ENSCHIG00000014513	URB2	99	50.932	Capra_hircus
ENSGAGG00000021879	URB2	99	52.987	ENSTSYG00000006924	URB2	99	52.987	Carlito_syrichta
ENSGAGG00000021879	URB2	62	60.550	ENSCPOG00000020777	-	99	60.550	Cavia_porcellus
ENSGAGG00000021879	URB2	100	54.936	ENSCCAG00000023932	URB2	100	54.936	Cebus_capucinus
ENSGAGG00000021879	URB2	100	55.658	ENSCATG00000043366	URB2	100	55.658	Cercocebus_atys
ENSGAGG00000021879	URB2	100	52.854	ENSCLAG00000006268	URB2	100	52.854	Chinchilla_lanigera
ENSGAGG00000021879	URB2	100	55.491	ENSCSAG00000010599	URB2	100	55.491	Chlorocebus_sabaeus
ENSGAGG00000021879	URB2	68	58.277	ENSCHOG00000010163	URB2	70	58.277	Choloepus_hoffmanni
ENSGAGG00000021879	URB2	100	94.910	ENSCPBG00000006191	URB2	100	94.910	Chrysemys_picta_bellii
ENSGAGG00000021879	URB2	100	55.427	ENSCANG00000023711	URB2	100	55.427	Colobus_angolensis_palliatus
ENSGAGG00000021879	URB2	100	51.443	ENSCGRG00001009591	Urb2	100	51.443	Cricetulus_griseus_chok1gshd
ENSGAGG00000021879	URB2	100	51.443	ENSCGRG00000011259	Urb2	100	51.443	Cricetulus_griseus_crigri
ENSGAGG00000021879	URB2	99	35.587	ENSCSEG00000000299	urb2	99	35.824	Cynoglossus_semilaevis
ENSGAGG00000021879	URB2	99	38.009	ENSCVAG00000011011	urb2	99	38.130	Cyprinodon_variegatus
ENSGAGG00000021879	URB2	99	40.785	ENSDARG00000003217	urb2	99	67.961	Danio_rerio
ENSGAGG00000021879	URB2	97	46.134	ENSDNOG00000043064	URB2	99	46.134	Dasypus_novemcinctus
ENSGAGG00000021879	URB2	100	52.021	ENSDORG00000014975	Urb2	100	52.021	Dipodomys_ordii
ENSGAGG00000021879	URB2	91	85.185	ENSETEG00000002869	URB2	88	85.185	Echinops_telfairi
ENSGAGG00000021879	URB2	99	54.371	ENSEASG00005012060	URB2	99	54.371	Equus_asinus_asinus
ENSGAGG00000021879	URB2	96	71.831	ENSECAG00000012338	URB2	99	71.831	Equus_caballus
ENSGAGG00000021879	URB2	95	67.606	ENSEEUG00000002669	URB2	92	67.606	Erinaceus_europaeus
ENSGAGG00000021879	URB2	99	43.489	ENSELUG00000014647	urb2	99	43.489	Esox_lucius
ENSGAGG00000021879	URB2	100	54.429	ENSFCAG00000007662	URB2	100	54.429	Felis_catus
ENSGAGG00000021879	URB2	100	66.431	ENSFALG00000003385	URB2	100	66.431	Ficedula_albicollis
ENSGAGG00000021879	URB2	100	52.246	ENSFDAG00000021079	URB2	100	52.246	Fukomys_damarensis
ENSGAGG00000021879	URB2	99	38.021	ENSFHEG00000010357	urb2	99	38.081	Fundulus_heteroclitus
ENSGAGG00000021879	URB2	99	37.642	ENSGMOG00000012459	urb2	100	37.901	Gadus_morhua
ENSGAGG00000021879	URB2	100	69.839	ENSGALG00000011101	URB2	100	69.839	Gallus_gallus
ENSGAGG00000021879	URB2	99	41.035	ENSGACG00000016179	urb2	99	41.035	Gasterosteus_aculeatus
ENSGAGG00000021879	URB2	100	55.556	ENSGGOG00000025643	URB2	100	55.556	Gorilla_gorilla
ENSGAGG00000021879	URB2	99	57.927	ENSHBUG00000018469	urb2	96	57.927	Haplochromis_burtoni
ENSGAGG00000021879	URB2	97	51.979	ENSHGLG00000016561	URB2	99	51.979	Heterocephalus_glaber_female
ENSGAGG00000021879	URB2	100	50.867	ENSHGLG00100001838	URB2	100	50.867	Heterocephalus_glaber_male
ENSGAGG00000021879	URB2	99	39.658	ENSIPUG00000020315	urb2	99	39.658	Ictalurus_punctatus
ENSGAGG00000021879	URB2	100	52.378	ENSSTOG00000025323	URB2	100	52.378	Ictidomys_tridecemlineatus
ENSGAGG00000021879	URB2	100	52.188	ENSJJAG00000011998	Urb2	100	52.188	Jaculus_jaculus
ENSGAGG00000021879	URB2	99	37.116	ENSKMAG00000020129	urb2	99	37.116	Kryptolebias_marmoratus
ENSGAGG00000021879	URB2	100	55.032	ENSLACG00000002038	URB2	100	55.032	Latimeria_chalumnae
ENSGAGG00000021879	URB2	100	46.794	ENSLOCG00000015462	urb2	100	46.794	Lepisosteus_oculatus
ENSGAGG00000021879	URB2	99	54.785	ENSLAFG00000012484	URB2	100	54.785	Loxodonta_africana
ENSGAGG00000021879	URB2	100	55.206	ENSMFAG00000039905	URB2	100	55.206	Macaca_fascicularis
ENSGAGG00000021879	URB2	100	55.463	ENSMMUG00000009509	URB2	100	55.463	Macaca_mulatta
ENSGAGG00000021879	URB2	100	55.398	ENSMNEG00000038762	URB2	100	55.398	Macaca_nemestrina
ENSGAGG00000021879	URB2	100	55.620	ENSMLEG00000043252	URB2	100	55.620	Mandrillus_leucophaeus
ENSGAGG00000021879	URB2	99	36.669	ENSMAMG00000020365	urb2	99	37.224	Mastacembelus_armatus
ENSGAGG00000021879	URB2	99	57.317	ENSMZEG00005011027	urb2	96	57.317	Maylandia_zebra
ENSGAGG00000021879	URB2	94	64.092	ENSMGAG00000012073	URB2	100	64.092	Meleagris_gallopavo
ENSGAGG00000021879	URB2	95	69.014	ENSMAUG00000017980	Urb2	100	69.014	Mesocricetus_auratus
ENSGAGG00000021879	URB2	99	54.446	ENSMICG00000033302	URB2	99	54.446	Microcebus_murinus
ENSGAGG00000021879	URB2	100	51.277	ENSMOCG00000020369	Urb2	100	51.277	Microtus_ochrogaster
ENSGAGG00000021879	URB2	99	37.355	ENSMALG00000006529	urb2	99	37.565	Monopterus_albus
ENSGAGG00000021879	URB2	100	51.284	ENSMUSG00000031976	Urb2	100	51.284	Mus_musculus
ENSGAGG00000021879	URB2	100	53.732	ENSMPUG00000012438	URB2	100	53.732	Mustela_putorius_furo
ENSGAGG00000021879	URB2	100	52.378	ENSNGAG00000016524	Urb2	100	52.378	Nannospalax_galili
ENSGAGG00000021879	URB2	100	55.491	ENSNLEG00000014450	URB2	100	55.491	Nomascus_leucogenys
ENSGAGG00000021879	URB2	87	76.636	ENSMEUG00000016434	URB2	86	76.636	Notamacropus_eugenii
ENSGAGG00000021879	URB2	91	54.080	ENSOPRG00000009906	URB2	92	54.080	Ochotona_princeps
ENSGAGG00000021879	URB2	100	52.537	ENSODEG00000005593	URB2	100	52.537	Octodon_degus
ENSGAGG00000021879	URB2	99	40.253	ENSONIG00000017078	urb2	99	40.265	Oreochromis_niloticus
ENSGAGG00000021879	URB2	100	46.371	ENSOANG00000013732	URB2	100	46.371	Ornithorhynchus_anatinus
ENSGAGG00000021879	URB2	99	54.692	ENSOCUG00000010700	URB2	99	54.627	Oryctolagus_cuniculus
ENSGAGG00000021879	URB2	99	38.112	ENSORLG00000010915	urb2	99	37.993	Oryzias_latipes
ENSGAGG00000021879	URB2	99	37.851	ENSORLG00020003361	urb2	99	37.851	Oryzias_latipes_hni
ENSGAGG00000021879	URB2	99	37.701	ENSORLG00015001534	urb2	99	37.761	Oryzias_latipes_hsok
ENSGAGG00000021879	URB2	99	36.450	ENSOMEG00000010076	urb2	99	36.732	Oryzias_melastigma
ENSGAGG00000021879	URB2	99	53.436	ENSOGAG00000003021	URB2	99	53.436	Otolemur_garnettii
ENSGAGG00000021879	URB2	99	51.091	ENSOARG00000003102	URB2	99	51.027	Ovis_aries
ENSGAGG00000021879	URB2	100	55.491	ENSPPAG00000040629	URB2	100	55.491	Pan_paniscus
ENSGAGG00000021879	URB2	100	54.493	ENSPPRG00000012767	URB2	100	54.493	Panthera_pardus
ENSGAGG00000021879	URB2	95	68.182	ENSPTIG00000012577	URB2	100	68.182	Panthera_tigris_altaica
ENSGAGG00000021879	URB2	100	55.299	ENSPTRG00000002092	URB2	100	55.299	Pan_troglodytes
ENSGAGG00000021879	URB2	100	54.399	ENSPANG00000002245	URB2	100	54.399	Papio_anubis
ENSGAGG00000021879	URB2	100	44.297	ENSPKIG00000005787	urb2	100	44.297	Paramormyrops_kingsleyae
ENSGAGG00000021879	URB2	100	88.144	ENSPSIG00000002690	URB2	100	88.144	Pelodiscus_sinensis
ENSGAGG00000021879	URB2	99	51.237	ENSPEMG00000019551	Urb2	100	51.237	Peromyscus_maniculatus_bairdii
ENSGAGG00000021879	URB2	100	56.941	ENSPCIG00000030071	URB2	100	56.877	Phascolarctos_cinereus
ENSGAGG00000021879	URB2	99	38.365	ENSPFOG00000014330	urb2	99	38.335	Poecilia_formosa
ENSGAGG00000021879	URB2	99	37.150	ENSPLAG00000014654	urb2	99	37.340	Poecilia_latipinna
ENSGAGG00000021879	URB2	99	37.354	ENSPMEG00000012356	urb2	99	37.354	Poecilia_mexicana
ENSGAGG00000021879	URB2	99	36.810	ENSPREG00000010268	urb2	99	36.849	Poecilia_reticulata
ENSGAGG00000021879	URB2	99	55.463	ENSPPYG00000000123	URB2	99	55.463	Pongo_abelii
ENSGAGG00000021879	URB2	99	54.855	ENSPCOG00000023537	URB2	99	54.843	Propithecus_coquereli
ENSGAGG00000021879	URB2	100	47.595	ENSPVAG00000002108	URB2	100	47.949	Pteropus_vampyrus
ENSGAGG00000021879	URB2	89	37.695	ENSPNYG00000016840	urb2	95	37.695	Pundamilia_nyererei
ENSGAGG00000021879	URB2	100	41.698	ENSPNAG00000013684	urb2	100	41.698	Pygocentrus_nattereri
ENSGAGG00000021879	URB2	100	51.377	ENSRNOG00000026853	Urb2	97	51.377	Rattus_norvegicus
ENSGAGG00000021879	URB2	100	55.527	ENSRBIG00000037937	URB2	100	55.527	Rhinopithecus_bieti
ENSGAGG00000021879	URB2	100	55.656	ENSRROG00000039854	URB2	100	55.656	Rhinopithecus_roxellana
ENSGAGG00000021879	URB2	100	54.423	ENSSBOG00000023055	URB2	100	54.423	Saimiri_boliviensis_boliviensis
ENSGAGG00000021879	URB2	100	57.134	ENSSHAG00000014735	URB2	100	57.134	Sarcophilus_harrisii
ENSGAGG00000021879	URB2	98	43.154	ENSSFOG00015015432	urb2	98	43.329	Scleropages_formosus
ENSGAGG00000021879	URB2	89	37.892	ENSSMAG00000004984	urb2	95	37.892	Scophthalmus_maximus
ENSGAGG00000021879	URB2	99	38.090	ENSSDUG00000000902	urb2	99	38.528	Seriola_dumerili
ENSGAGG00000021879	URB2	100	72.254	ENSSPUG00000018549	URB2	100	72.254	Sphenodon_punctatus
ENSGAGG00000021879	URB2	99	39.349	ENSSPAG00000013632	urb2	99	39.408	Stegastes_partitus
ENSGAGG00000021879	URB2	99	51.669	ENSSSCG00000010186	URB2	99	51.669	Sus_scrofa
ENSGAGG00000021879	URB2	100	65.788	ENSTGUG00000009990	URB2	100	65.788	Taeniopygia_guttata
ENSGAGG00000021879	URB2	99	37.559	ENSTRUG00000008173	urb2	99	37.471	Takifugu_rubripes
ENSGAGG00000021879	URB2	92	47.000	ENSTNIG00000017689	urb2	99	38.413	Tetraodon_nigroviridis
ENSGAGG00000021879	URB2	97	61.826	ENSTTRG00000014864	URB2	95	61.826	Tursiops_truncatus
ENSGAGG00000021879	URB2	99	54.727	ENSUAMG00000015022	URB2	99	54.727	Ursus_americanus
ENSGAGG00000021879	URB2	99	54.534	ENSUMAG00000004728	URB2	99	54.598	Ursus_maritimus
ENSGAGG00000021879	URB2	64	69.504	ENSVPAG00000001750	-	62	69.504	Vicugna_pacos
ENSGAGG00000021879	URB2	100	53.920	ENSVVUG00000006747	URB2	100	53.920	Vulpes_vulpes
ENSGAGG00000021879	URB2	100	49.679	ENSXETG00000023331	urb2	100	49.679	Xenopus_tropicalis
ENSGAGG00000021879	URB2	99	37.768	ENSXMAG00000015059	urb2	99	37.768	Xiphophorus_maculatus