EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000022039 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 627 bases
Position: chrPPEB01000356.1:132402-133028
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000030614	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000034736	-	627	-	ENSGAGP00000030614	208 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000022039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000022039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000022039	-	75	32.099	ENSGAGG00000009488	RAB33A	71	32.099
ENSGAGG00000022039	-	75	31.875	ENSGAGG00000021701	RAB6A	75	31.875
ENSGAGG00000022039	-	85	31.313	ENSGAGG00000003668	RASL10B	97	31.313
ENSGAGG00000022039	-	73	31.788	ENSGAGG00000017673	NRAS	84	33.540
ENSGAGG00000022039	-	78	34.337	ENSGAGG00000017981	RAB9A	82	34.337
ENSGAGG00000022039	-	73	32.237	ENSGAGG00000020094	MRAS	78	33.333
ENSGAGG00000022039	-	93	32.821	ENSGAGG00000021838	RERG	97	32.821
ENSGAGG00000022039	-	73	31.788	ENSGAGG00000011790	-	85	33.540
ENSGAGG00000022039	-	73	32.450	ENSGAGG00000019886	-	84	34.161
ENSGAGG00000022039	-	73	33.113	ENSGAGG00000011057	KRAS	97	31.633
ENSGAGG00000022039	-	74	30.323	ENSGAGG00000013139	RAB19	70	30.323
ENSGAGG00000022039	-	71	34.694	ENSGAGG00000025053	RRAS2	77	36.709
ENSGAGG00000022039	-	82	33.714	ENSGAGG00000000742	-	99	31.250
ENSGAGG00000022039	-	87	32.804	ENSGAGG00000015067	RASL11A	79	32.804
ENSGAGG00000022039	-	75	33.750	ENSGAGG00000004474	RAB30	77	33.750
ENSGAGG00000022039	-	78	33.735	ENSGAGG00000012314	RAB9B	82	33.735
ENSGAGG00000022039	-	63	35.075	ENSGAGG00000020394	RAB7B	85	35.075
ENSGAGG00000022039	-	78	31.977	ENSGAGG00000024347	-	68	31.977
ENSGAGG00000022039	-	55	39.130	ENSGAGG00000016932	-	86	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000022039	-	100	74.519	ENSAPOG00000014798	-	100	74.519	Acanthochromis_polyacanthus
ENSGAGG00000022039	-	99	59.809	ENSAPOG00000019479	rasd3	99	59.809	Acanthochromis_polyacanthus
ENSGAGG00000022039	-	100	79.808	ENSAPOG00000013337	rasd4	100	79.808	Acanthochromis_polyacanthus
ENSGAGG00000022039	-	99	73.171	ENSACIG00000006211	-	99	73.171	Amphilophus_citrinellus
ENSGAGG00000022039	-	100	80.288	ENSACIG00000008211	rasd4	100	80.288	Amphilophus_citrinellus
ENSGAGG00000022039	-	100	80.288	ENSAOCG00000011925	rasd4	100	80.288	Amphiprion_ocellaris
ENSGAGG00000022039	-	100	74.519	ENSAOCG00000013791	-	100	74.519	Amphiprion_ocellaris
ENSGAGG00000022039	-	100	74.519	ENSAPEG00000014385	-	100	74.519	Amphiprion_percula
ENSGAGG00000022039	-	100	80.288	ENSAPEG00000001236	rasd4	100	80.288	Amphiprion_percula
ENSGAGG00000022039	-	99	75.362	ENSATEG00000004140	rasd4	99	75.362	Anabas_testudineus
ENSGAGG00000022039	-	100	79.808	ENSATEG00000004192	-	100	79.808	Anabas_testudineus
ENSGAGG00000022039	-	100	78.846	ENSACLG00000005453	-	100	78.846	Astatotilapia_calliptera
ENSGAGG00000022039	-	100	79.808	ENSCSEG00000003581	rasd4	99	79.808	Cynoglossus_semilaevis
ENSGAGG00000022039	-	99	74.396	ENSCSEG00000017910	-	99	74.396	Cynoglossus_semilaevis
ENSGAGG00000022039	-	99	71.707	ENSCVAG00000014662	-	99	71.707	Cyprinodon_variegatus
ENSGAGG00000022039	-	99	78.261	ENSCVAG00000004658	rasd4	99	78.261	Cyprinodon_variegatus
ENSGAGG00000022039	-	87	48.108	FBgn0040370	CG13375	67	48.108	Drosophila_melanogaster
ENSGAGG00000022039	-	85	48.023	ENSEBUG00000013908	rasd3	84	48.023	Eptatretus_burgeri
ENSGAGG00000022039	-	99	78.095	ENSELUG00000008115	-	99	78.095	Esox_lucius
ENSGAGG00000022039	-	100	85.096	ENSFALG00000000852	-	100	85.096	Ficedula_albicollis
ENSGAGG00000022039	-	100	78.846	ENSFHEG00000003385	rasd4	100	78.846	Fundulus_heteroclitus
ENSGAGG00000022039	-	99	70.732	ENSFHEG00000016103	-	99	70.732	Fundulus_heteroclitus
ENSGAGG00000022039	-	100	78.846	ENSGAFG00000010126	rasd4	100	78.846	Gambusia_affinis
ENSGAGG00000022039	-	100	77.885	ENSGACG00000019357	rasd4	100	77.885	Gasterosteus_aculeatus
ENSGAGG00000022039	-	100	78.846	ENSHBUG00000003805	-	100	78.846	Haplochromis_burtoni
ENSGAGG00000022039	-	99	71.220	ENSHCOG00000015161	-	99	71.220	Hippocampus_comes
ENSGAGG00000022039	-	100	77.885	ENSHCOG00000018554	rasd4	100	77.885	Hippocampus_comes
ENSGAGG00000022039	-	99	76.812	ENSIPUG00000021888	-	99	76.812	Ictalurus_punctatus
ENSGAGG00000022039	-	100	79.327	ENSKMAG00000000984	rasd4	100	79.327	Kryptolebias_marmoratus
ENSGAGG00000022039	-	99	71.981	ENSLACG00000003581	rasd3	99	71.981	Latimeria_chalumnae
ENSGAGG00000022039	-	100	80.769	ENSLACG00000001282	-	100	80.769	Latimeria_chalumnae
ENSGAGG00000022039	-	99	77.295	ENSLOCG00000017761	rasd4	99	77.295	Lepisosteus_oculatus
ENSGAGG00000022039	-	99	70.000	ENSLOCG00000018104	rasd3	99	70.000	Lepisosteus_oculatus
ENSGAGG00000022039	-	100	79.808	ENSMAMG00000001194	-	100	79.808	Mastacembelus_armatus
ENSGAGG00000022039	-	100	78.846	ENSMZEG00005023931	-	100	78.846	Maylandia_zebra
ENSGAGG00000022039	-	99	73.913	ENSMMOG00000012444	rasd4	99	73.913	Mola_mola
ENSGAGG00000022039	-	99	75.845	ENSMALG00000019233	rasd4	99	75.845	Monopterus_albus
ENSGAGG00000022039	-	100	79.808	ENSMALG00000022582	-	100	79.808	Monopterus_albus
ENSGAGG00000022039	-	99	74.634	ENSNBRG00000001521	-	99	74.634	Neolamprologus_brichardi
ENSGAGG00000022039	-	100	79.327	ENSONIG00000021230	-	100	79.327	Oreochromis_niloticus
ENSGAGG00000022039	-	100	76.923	ENSORLG00020019402	rasd4	100	76.923	Oryzias_latipes_hni
ENSGAGG00000022039	-	100	76.923	ENSORLG00015019530	rasd4	100	76.923	Oryzias_latipes_hsok
ENSGAGG00000022039	-	100	77.885	ENSOMEG00000010545	rasd4	100	77.885	Oryzias_melastigma
ENSGAGG00000022039	-	99	68.599	ENSOMEG00000019524	-	99	68.599	Oryzias_melastigma
ENSGAGG00000022039	-	99	61.429	ENSPKIG00000018772	-	99	61.429	Paramormyrops_kingsleyae
ENSGAGG00000022039	-	99	79.227	ENSPKIG00000007853	rasd4	99	79.227	Paramormyrops_kingsleyae
ENSGAGG00000022039	-	99	65.238	ENSPKIG00000013103	rasd3	99	65.238	Paramormyrops_kingsleyae
ENSGAGG00000022039	-	100	90.865	ENSPSIG00000001290	-	100	90.865	Pelodiscus_sinensis
ENSGAGG00000022039	-	99	75.845	ENSPMGG00000000859	rasd4	99	75.845	Periophthalmus_magnuspinnatus
ENSGAGG00000022039	-	100	74.519	ENSPMGG00000012580	-	100	74.519	Periophthalmus_magnuspinnatus
ENSGAGG00000022039	-	100	79.048	ENSPLAG00000003951	rasd4	99	79.048	Poecilia_latipinna
ENSGAGG00000022039	-	99	71.220	ENSPLAG00000006115	-	99	71.220	Poecilia_latipinna
ENSGAGG00000022039	-	99	71.707	ENSPMEG00000003690	-	99	71.707	Poecilia_mexicana
ENSGAGG00000022039	-	100	79.524	ENSPMEG00000021391	rasd4	99	79.524	Poecilia_mexicana
ENSGAGG00000022039	-	99	71.707	ENSPREG00000015955	-	99	71.707	Poecilia_reticulata
ENSGAGG00000022039	-	100	79.327	ENSPREG00000017010	rasd4	100	79.327	Poecilia_reticulata
ENSGAGG00000022039	-	100	78.846	ENSPNYG00000016378	-	100	78.846	Pundamilia_nyererei
ENSGAGG00000022039	-	100	77.404	ENSPNAG00000005318	-	100	77.404	Pygocentrus_nattereri
ENSGAGG00000022039	-	99	82.609	ENSSFOG00015004613	rasd4	99	82.609	Scleropages_formosus
ENSGAGG00000022039	-	99	66.190	ENSSFOG00015008777	rasd3	99	66.190	Scleropages_formosus
ENSGAGG00000022039	-	99	74.634	ENSSMAG00000009101	-	99	74.634	Scophthalmus_maximus
ENSGAGG00000022039	-	100	79.327	ENSSMAG00000016456	rasd4	100	79.327	Scophthalmus_maximus
ENSGAGG00000022039	-	100	80.769	ENSSDUG00000020340	-	100	80.769	Seriola_dumerili
ENSGAGG00000022039	-	99	75.845	ENSSDUG00000015982	rasd4	99	75.845	Seriola_dumerili
ENSGAGG00000022039	-	100	80.476	ENSSLDG00000002757	-	99	80.476	Seriola_lalandi_dorsalis
ENSGAGG00000022039	-	99	75.845	ENSSLDG00000017618	rasd4	99	75.845	Seriola_lalandi_dorsalis
ENSGAGG00000022039	-	96	60.099	ENSSLDG00000016267	rasd3	94	60.099	Seriola_lalandi_dorsalis
ENSGAGG00000022039	-	99	75.362	ENSSPAG00000011401	-	99	75.362	Stegastes_partitus
ENSGAGG00000022039	-	100	80.288	ENSSPAG00000021839	rasd4	100	80.288	Stegastes_partitus
ENSGAGG00000022039	-	100	87.500	ENSTGUG00000007747	-	100	87.500	Taeniopygia_guttata
ENSGAGG00000022039	-	100	79.808	ENSTRUG00000022489	rasd4	100	79.808	Takifugu_rubripes
ENSGAGG00000022039	-	100	79.327	ENSXCOG00000013226	rasd4	100	79.327	Xiphophorus_couchianus
ENSGAGG00000022039	-	95	68.720	ENSXMAG00000021609	rasd4	99	68.720	Xiphophorus_maculatus