EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000022169 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 25317 bases
Position: chrPPEB01002266.1:156991-182307
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000030836	GUCT	PF08152.12	2.5e-33	1	1
ENSGAGP00000030838	ResIII	PF04851.15	1.2e-09	1	1
ENSGAGP00000030836	ResIII	PF04851.15	1.7e-09	1	1
ENSGAGP00000030836	DEAD	PF00270.29	5.4e-48	1	1
ENSGAGP00000030838	DEAD	PF00270.29	6e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000034974	-	3135	-	ENSGAGP00000030838	645 (aa)	-	-
ENSGAGT00000034970	-	3315	-	ENSGAGP00000030836	705 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000022169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000022169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000022169	-	57	31.818	ENSGAGG00000005277	EIF4A1	94	31.026
ENSGAGG00000022169	-	63	30.162	ENSGAGG00000018601	DDX41	59	32.479
ENSGAGG00000022169	-	50	36.196	ENSGAGG00000025230	-	51	35.650
ENSGAGG00000022169	-	55	32.873	ENSGAGG00000021204	-	55	32.873
ENSGAGG00000022169	-	52	34.463	ENSGAGG00000004207	-	54	33.693
ENSGAGG00000022169	-	53	30.747	ENSGAGG00000021228	DDX59	53	30.747
ENSGAGG00000022169	-	57	32.976	ENSGAGG00000019478	EIF4A2	90	32.464
ENSGAGG00000022169	-	57	31.481	ENSGAGG00000016434	EIF4A3	88	31.452
ENSGAGG00000022169	-	51	31.085	ENSGAGG00000015704	-	63	30.588
ENSGAGG00000022169	-	60	31.990	ENSGAGG00000001296	DDX27	51	31.990
ENSGAGG00000022169	-	53	32.961	ENSGAGG00000022213	DDX49	74	31.510
ENSGAGG00000022169	-	94	75.867	ENSGAGG00000022163	-	86	75.606
ENSGAGG00000022169	-	55	32.778	ENSGAGG00000020790	DDX5	58	32.778
ENSGAGG00000022169	-	61	32.419	ENSGAGG00000023801	DDX47	75	32.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000022169	-	87	71.787	ENSG00000165732	DDX21	86	73.203	Homo_sapiens
ENSGAGG00000022169	-	70	69.401	ENSAPOG00000012269	ddx21	71	76.943	Acanthochromis_polyacanthus
ENSGAGG00000022169	-	82	73.892	ENSAMEG00000017978	DDX21	72	74.056	Ailuropoda_melanoleuca
ENSGAGG00000022169	-	78	74.545	ENSACIG00000006429	ddx21	81	70.744	Amphilophus_citrinellus
ENSGAGG00000022169	-	82	69.371	ENSAOCG00000023174	ddx21	80	70.695	Amphiprion_ocellaris
ENSGAGG00000022169	-	82	69.371	ENSAPEG00000007108	ddx21	80	70.695	Amphiprion_percula
ENSGAGG00000022169	-	77	75.912	ENSATEG00000022194	ddx21	81	71.195	Anabas_testudineus
ENSGAGG00000022169	-	88	74.641	ENSAPLG00000013022	-	96	71.343	Anas_platyrhynchos
ENSGAGG00000022169	-	92	76.426	ENSACAG00000009829	DDX21	88	74.395	Anolis_carolinensis
ENSGAGG00000022169	-	87	71.630	ENSANAG00000038109	DDX21	94	78.769	Aotus_nancymaae
ENSGAGG00000022169	-	78	74.545	ENSACLG00000008248	ddx21	77	70.328	Astatotilapia_calliptera
ENSGAGG00000022169	-	91	65.350	ENSAMXG00000009140	ddx21	86	67.367	Astyanax_mexicanus
ENSGAGG00000022169	-	89	70.444	ENSBTAG00000014558	DDX21	82	70.399	Bos_taurus
ENSGAGG00000022169	-	87	71.317	ENSCJAG00000012876	DDX21	78	72.712	Callithrix_jacchus
ENSGAGG00000022169	-	89	71.341	ENSCAFG00000013791	DDX21	78	73.821	Canis_familiaris
ENSGAGG00000022169	-	52	82.090	ENSCAFG00020025973	-	92	82.090	Canis_lupus_dingo
ENSGAGG00000022169	-	82	54.104	ENSCHIG00000006053	-	73	54.104	Capra_hircus
ENSGAGG00000022169	-	92	53.353	ENSCHIG00000014104	-	72	56.324	Capra_hircus
ENSGAGG00000022169	-	89	70.122	ENSCHIG00000000248	-	85	70.076	Capra_hircus
ENSGAGG00000022169	-	89	70.687	ENSTSYG00000011231	DDX21	82	70.687	Carlito_syrichta
ENSGAGG00000022169	-	88	59.664	ENSCAPG00000005945	DDX21	78	60.862	Cavia_aperea
ENSGAGG00000022169	-	100	62.356	ENSCPOG00000015479	DDX21	82	70.076	Cavia_porcellus
ENSGAGG00000022169	-	87	71.473	ENSCCAG00000026288	DDX21	96	76.385	Cebus_capucinus
ENSGAGG00000022169	-	87	71.160	ENSCATG00000043540	DDX21	78	73.366	Cercocebus_atys
ENSGAGG00000022169	-	89	54.758	ENSCATG00000045019	-	74	59.715	Cercocebus_atys
ENSGAGG00000022169	-	88	75.000	ENSCLAG00000012235	DDX21	82	70.433	Chinchilla_lanigera
ENSGAGG00000022169	-	91	63.222	ENSCHOG00000000234	DDX21	77	65.829	Choloepus_hoffmanni
ENSGAGG00000022169	-	100	90.780	ENSCPBG00000019937	-	86	90.780	Chrysemys_picta_bellii
ENSGAGG00000022169	-	99	74.468	ENSCPBG00000019934	-	99	74.184	Chrysemys_picta_bellii
ENSGAGG00000022169	-	87	71.787	ENSCANG00000039926	DDX21	78	73.039	Colobus_angolensis_palliatus
ENSGAGG00000022169	-	87	54.545	ENSCANG00000036110	-	76	55.229	Colobus_angolensis_palliatus
ENSGAGG00000022169	-	97	55.453	ENSCGRG00001017824	-	82	62.559	Cricetulus_griseus_chok1gshd
ENSGAGG00000022169	-	94	67.445	ENSCGRG00001016264	-	78	72.277	Cricetulus_griseus_chok1gshd
ENSGAGG00000022169	-	94	67.445	ENSCGRG00000015134	-	78	72.277	Cricetulus_griseus_crigri
ENSGAGG00000022169	-	97	55.585	ENSCGRG00000008450	-	82	62.717	Cricetulus_griseus_crigri
ENSGAGG00000022169	-	77	73.713	ENSCSEG00000013939	ddx21	80	68.903	Cynoglossus_semilaevis
ENSGAGG00000022169	-	92	63.585	ENSCVAG00000018333	ddx21	90	64.611	Cyprinodon_variegatus
ENSGAGG00000022169	-	80	71.936	ENSDARG00000063626	ddx21	77	69.408	Danio_rerio
ENSGAGG00000022169	-	87	71.429	ENSDNOG00000001680	DDX21	84	71.275	Dasypus_novemcinctus
ENSGAGG00000022169	-	89	64.134	ENSDORG00000002202	Ddx21	81	64.373	Dipodomys_ordii
ENSGAGG00000022169	-	82	72.533	ENSETEG00000014073	DDX21	78	71.613	Echinops_telfairi
ENSGAGG00000022169	-	100	61.935	ENSEASG00005015598	DDX21	82	69.925	Equus_asinus_asinus
ENSGAGG00000022169	-	100	62.850	ENSECAG00000010810	DDX21	82	71.145	Equus_caballus
ENSGAGG00000022169	-	82	69.257	ENSEEUG00000005959	DDX21	75	72.381	Erinaceus_europaeus
ENSGAGG00000022169	-	77	76.111	ENSELUG00000018856	ddx21	79	71.005	Esox_lucius
ENSGAGG00000022169	-	82	75.249	ENSFCAG00000002109	DDX21	78	74.104	Felis_catus
ENSGAGG00000022169	-	83	76.581	ENSFALG00000013022	-	87	77.066	Ficedula_albicollis
ENSGAGG00000022169	-	92	70.046	ENSFALG00000013043	-	94	69.138	Ficedula_albicollis
ENSGAGG00000022169	-	100	62.003	ENSFDAG00000007401	DDX21	79	72.920	Fukomys_damarensis
ENSGAGG00000022169	-	74	76.008	ENSFHEG00000019089	ddx21	75	73.201	Fundulus_heteroclitus
ENSGAGG00000022169	-	76	66.976	ENSGMOG00000012354	ddx21	93	64.398	Gadus_morhua
ENSGAGG00000022169	-	94	70.238	ENSGALG00000004144	-	97	70.519	Gallus_gallus
ENSGAGG00000022169	-	96	66.179	ENSGALG00000042254	-	86	74.315	Gallus_gallus
ENSGAGG00000022169	-	83	70.990	ENSGAFG00000003427	ddx21	84	68.189	Gambusia_affinis
ENSGAGG00000022169	-	76	73.889	ENSGACG00000016060	ddx21	92	68.740	Gasterosteus_aculeatus
ENSGAGG00000022169	-	87	71.787	ENSGGOG00000005065	DDX21	78	73.203	Gorilla_gorilla
ENSGAGG00000022169	-	78	74.545	ENSHBUG00000017638	ddx21	77	70.328	Haplochromis_burtoni
ENSGAGG00000022169	-	89	70.122	ENSHGLG00000013902	DDX21	82	70.427	Heterocephalus_glaber_female
ENSGAGG00000022169	-	89	70.122	ENSHGLG00100015956	DDX21	83	70.679	Heterocephalus_glaber_male
ENSGAGG00000022169	-	89	66.038	ENSHCOG00000014503	ddx21	82	68.823	Hippocampus_comes
ENSGAGG00000022169	-	83	71.698	ENSIPUG00000006972	ddx21	79	70.957	Ictalurus_punctatus
ENSGAGG00000022169	-	89	70.183	ENSSTOG00000011572	DDX21	76	74.204	Ictidomys_tridecemlineatus
ENSGAGG00000022169	-	92	68.189	ENSJJAG00000014035	Ddx21	76	74.167	Jaculus_jaculus
ENSGAGG00000022169	-	78	74.364	ENSKMAG00000020766	ddx21	81	70.395	Kryptolebias_marmoratus
ENSGAGG00000022169	-	87	68.608	ENSLBEG00000001244	ddx21	83	68.404	Labrus_bergylta
ENSGAGG00000022169	-	81	80.088	ENSLACG00000000658	DDX21	99	76.844	Latimeria_chalumnae
ENSGAGG00000022169	-	77	75.000	ENSLOCG00000009123	ddx21	78	70.443	Lepisosteus_oculatus
ENSGAGG00000022169	-	89	69.909	ENSLAFG00000007962	DDX21	78	72.078	Loxodonta_africana
ENSGAGG00000022169	-	87	55.981	ENSMFAG00000033536	-	74	60.036	Macaca_fascicularis
ENSGAGG00000022169	-	87	71.317	ENSMFAG00000044838	DDX21	95	77.483	Macaca_fascicularis
ENSGAGG00000022169	-	87	71.317	ENSMMUG00000001005	DDX21	78	73.529	Macaca_mulatta
ENSGAGG00000022169	-	92	56.825	ENSMMUG00000032331	-	84	56.930	Macaca_mulatta
ENSGAGG00000022169	-	87	71.317	ENSMNEG00000032825	DDX21	78	73.529	Macaca_nemestrina
ENSGAGG00000022169	-	87	56.000	ENSMLEG00000028215	-	74	60.071	Mandrillus_leucophaeus
ENSGAGG00000022169	-	87	67.398	ENSMLEG00000028940	DDX21	91	77.987	Mandrillus_leucophaeus
ENSGAGG00000022169	-	95	66.848	ENSMAMG00000019683	ddx21	98	62.869	Mastacembelus_armatus
ENSGAGG00000022169	-	77	74.818	ENSMZEG00005011618	ddx21	81	70.328	Maylandia_zebra
ENSGAGG00000022169	-	93	71.154	ENSMGAG00000004298	DDX21	99	71.281	Meleagris_gallopavo
ENSGAGG00000022169	-	92	64.067	ENSMAUG00000011153	Ddx21	79	72.425	Mesocricetus_auratus
ENSGAGG00000022169	-	91	69.715	ENSMICG00000015112	-	82	69.160	Microcebus_murinus
ENSGAGG00000022169	-	91	64.154	ENSMICG00000033371	-	97	61.741	Microcebus_murinus
ENSGAGG00000022169	-	94	69.006	ENSMOCG00000020855	Ddx21	78	73.344	Microtus_ochrogaster
ENSGAGG00000022169	-	67	76.267	ENSMMOG00000015938	ddx21	91	75.104	Mola_mola
ENSGAGG00000022169	-	77	74.495	ENSMODG00000010727	DDX21	81	70.638	Monodelphis_domestica
ENSGAGG00000022169	-	77	75.406	ENSMALG00000010489	ddx21	88	69.271	Monopterus_albus
ENSGAGG00000022169	-	93	65.049	MGP_CAROLIEiJ_G0015388	Ddx21	78	72.368	Mus_caroli
ENSGAGG00000022169	-	88	70.690	ENSMUSG00000020075	Ddx21	71	72.533	Mus_musculus
ENSGAGG00000022169	-	87	70.866	MGP_SPRETEiJ_G0016199	Ddx21	71	72.533	Mus_spretus
ENSGAGG00000022169	-	89	70.242	ENSMPUG00000004603	DDX21	78	72.464	Mustela_putorius_furo
ENSGAGG00000022169	-	96	64.777	ENSMLUG00000023298	DDX21	75	72.078	Myotis_lucifugus
ENSGAGG00000022169	-	99	61.460	ENSNGAG00000022273	Ddx21	81	70.451	Nannospalax_galili
ENSGAGG00000022169	-	77	74.818	ENSNBRG00000006198	ddx21	81	70.443	Neolamprologus_brichardi
ENSGAGG00000022169	-	87	71.473	ENSNLEG00000011591	DDX21	86	72.876	Nomascus_leucogenys
ENSGAGG00000022169	-	86	65.764	ENSOPRG00000001640	DDX21	73	72.222	Ochotona_princeps
ENSGAGG00000022169	-	81	63.687	ENSODEG00000012879	-	77	63.197	Octodon_degus
ENSGAGG00000022169	-	90	67.981	ENSONIG00000005499	ddx21	76	70.376	Oreochromis_niloticus
ENSGAGG00000022169	-	93	71.852	ENSOANG00000004777	DDX21	82	71.028	Ornithorhynchus_anatinus
ENSGAGG00000022169	-	82	73.632	ENSOCUG00000002888	DDX21	71	73.632	Oryctolagus_cuniculus
ENSGAGG00000022169	-	80	79.121	ENSORLG00000010122	ddx21	93	71.429	Oryzias_latipes
ENSGAGG00000022169	-	80	78.901	ENSORLG00020004409	ddx21	92	71.100	Oryzias_latipes_hni
ENSGAGG00000022169	-	80	79.121	ENSORLG00015000051	ddx21	93	71.429	Oryzias_latipes_hsok
ENSGAGG00000022169	-	83	76.050	ENSOMEG00000004523	ddx21	92	63.955	Oryzias_melastigma
ENSGAGG00000022169	-	87	64.448	ENSOGAG00000031242	-	89	68.100	Otolemur_garnettii
ENSGAGG00000022169	-	81	73.038	ENSOGAG00000001846	-	69	73.038	Otolemur_garnettii
ENSGAGG00000022169	-	88	75.148	ENSOARG00000005307	DDX21	82	70.229	Ovis_aries
ENSGAGG00000022169	-	87	71.787	ENSPPAG00000036670	DDX21	78	73.203	Pan_paniscus
ENSGAGG00000022169	-	82	75.500	ENSPPRG00000012523	DDX21	78	74.346	Panthera_pardus
ENSGAGG00000022169	-	82	75.500	ENSPTIG00000007268	DDX21	78	74.346	Panthera_tigris_altaica
ENSGAGG00000022169	-	87	71.787	ENSPTRG00000002563	DDX21	78	73.203	Pan_troglodytes
ENSGAGG00000022169	-	87	71.317	ENSPANG00000022140	DDX21	78	73.529	Papio_anubis
ENSGAGG00000022169	-	96	53.556	ENSPANG00000031334	-	84	55.023	Papio_anubis
ENSGAGG00000022169	-	97	65.562	ENSPKIG00000014660	ddx21	77	78.158	Paramormyrops_kingsleyae
ENSGAGG00000022169	-	95	88.406	ENSPSIG00000004724	DDX21	99	87.237	Pelodiscus_sinensis
ENSGAGG00000022169	-	52	77.745	ENSPMGG00000000721	ddx21	96	77.745	Periophthalmus_magnuspinnatus
ENSGAGG00000022169	-	96	63.041	ENSPEMG00000018513	Ddx21	81	69.255	Peromyscus_maniculatus_bairdii
ENSGAGG00000022169	-	88	76.786	ENSPCIG00000015505	DDX21	86	75.000	Phascolarctos_cinereus
ENSGAGG00000022169	-	85	67.563	ENSPFOG00000016196	ddx21	90	63.827	Poecilia_formosa
ENSGAGG00000022169	-	75	74.765	ENSPLAG00000017849	ddx21	84	71.429	Poecilia_latipinna
ENSGAGG00000022169	-	91	64.431	ENSPMEG00000014571	ddx21	90	63.459	Poecilia_mexicana
ENSGAGG00000022169	-	87	71.787	ENSPPYG00000002389	DDX21	78	73.203	Pongo_abelii
ENSGAGG00000022169	-	82	70.869	ENSPCAG00000016697	DDX21	83	70.833	Procavia_capensis
ENSGAGG00000022169	-	91	67.316	ENSPCOG00000019284	DDX21	81	66.412	Propithecus_coquereli
ENSGAGG00000022169	-	89	71.494	ENSPVAG00000009521	DDX21	78	73.984	Pteropus_vampyrus
ENSGAGG00000022169	-	74	74.763	ENSPNYG00000015566	ddx21	96	69.167	Pundamilia_nyererei
ENSGAGG00000022169	-	74	76.008	ENSPNAG00000004814	ddx21	76	74.860	Pygocentrus_nattereri
ENSGAGG00000022169	-	100	60.941	ENSRNOG00000048990	AABR07037356.1	82	70.031	Rattus_norvegicus
ENSGAGG00000022169	-	100	61.568	ENSRNOG00000043099	Ddx21	81	70.497	Rattus_norvegicus
ENSGAGG00000022169	-	87	66.983	ENSRBIG00000035862	-	85	66.099	Rhinopithecus_bieti
ENSGAGG00000022169	-	87	71.630	ENSRBIG00000043721	-	91	76.809	Rhinopithecus_bieti
ENSGAGG00000022169	-	87	71.473	ENSRROG00000033387	DDX21	78	73.366	Rhinopithecus_roxellana
ENSGAGG00000022169	-	85	54.992	ENSSBOG00000025801	-	78	55.726	Saimiri_boliviensis_boliviensis
ENSGAGG00000022169	-	51	66.972	ENSSBOG00000024156	-	88	66.972	Saimiri_boliviensis_boliviensis
ENSGAGG00000022169	-	92	65.797	ENSSFOG00015014610	ddx21	93	73.109	Scleropages_formosus
ENSGAGG00000022169	-	78	74.635	ENSSMAG00000003932	ddx21	80	70.530	Scophthalmus_maximus
ENSGAGG00000022169	-	90	70.019	ENSSDUG00000021420	ddx21	84	68.495	Seriola_dumerili
ENSGAGG00000022169	-	79	73.250	ENSSLDG00000025665	ddx21	94	70.618	Seriola_lalandi_dorsalis
ENSGAGG00000022169	-	83	80.872	ENSSPUG00000004088	DDX21	83	82.047	Sphenodon_punctatus
ENSGAGG00000022169	-	77	75.646	ENSSPAG00000013142	ddx21	80	70.521	Stegastes_partitus
ENSGAGG00000022169	-	100	62.532	ENSSSCG00000010247	DDX21	81	71.406	Sus_scrofa
ENSGAGG00000022169	-	82	76.792	ENSTGUG00000003810	-	87	76.756	Taeniopygia_guttata
ENSGAGG00000022169	-	82	71.022	ENSTRUG00000017570	ddx21	82	71.912	Takifugu_rubripes
ENSGAGG00000022169	-	80	78.242	ENSTNIG00000013798	ddx21	96	72.991	Tetraodon_nigroviridis
ENSGAGG00000022169	-	88	71.992	ENSTBEG00000002310	DDX21	73	73.673	Tupaia_belangeri
ENSGAGG00000022169	-	91	73.954	ENSTTRG00000016398	DDX21	85	68.713	Tursiops_truncatus
ENSGAGG00000022169	-	92	67.137	ENSUMAG00000007735	DDX21	78	73.108	Ursus_maritimus
ENSGAGG00000022169	-	79	74.951	ENSVPAG00000000627	DDX21	79	74.182	Vicugna_pacos
ENSGAGG00000022169	-	89	70.226	ENSVVUG00000020486	DDX21	78	72.830	Vulpes_vulpes
ENSGAGG00000022169	-	75	73.635	ENSXCOG00000009654	ddx21	81	70.396	Xiphophorus_couchianus
ENSGAGG00000022169	-	80	72.340	ENSXMAG00000008199	ddx21	83	68.537	Xiphophorus_maculatus