EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000022240 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 5901 bases
Position: chrPPEB01005888.1:77223-83123
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000030944	RVT_1	PF00078.27	6.2e-28	1	1
ENSGAGP00000030944	zf-CCHC	PF00098.23	7.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000035088	-	5901	-	ENSGAGP00000030944	1573 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000022240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000022240's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000022240	-	73	98.527	ENSGAGG00000025282	-	99	98.527
ENSGAGG00000022240	-	61	51.721	ENSGAGG00000014450	-	86	51.721
ENSGAGG00000022240	-	52	100.000	ENSGAGG00000012039	-	100	100.000
ENSGAGG00000022240	-	65	94.325	ENSGAGG00000023170	-	100	94.031
ENSGAGG00000022240	-	52	100.000	ENSGAGG00000020521	-	100	100.000
ENSGAGG00000022240	-	52	93.682	ENSGAGG00000023108	-	100	93.317
ENSGAGG00000022240	-	51	98.511	ENSGAGG00000022743	-	100	98.511
ENSGAGG00000022240	-	59	99.566	ENSGAGG00000002373	-	100	99.566
ENSGAGG00000022240	-	50	93.283	ENSGAGG00000025144	-	100	93.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000022240	-	57	46.726	ENSAPOG00000012135	-	77	46.726	Acanthochromis_polyacanthus
ENSGAGG00000022240	-	56	43.848	ENSAPOG00000008045	-	92	43.848	Acanthochromis_polyacanthus
ENSGAGG00000022240	-	70	42.231	ENSACLG00000010042	-	89	42.231	Astatotilapia_calliptera
ENSGAGG00000022240	-	94	32.637	ENSACLG00000014870	-	91	32.658	Astatotilapia_calliptera
ENSGAGG00000022240	-	89	40.591	ENSACLG00000018060	-	91	40.591	Astatotilapia_calliptera
ENSGAGG00000022240	-	88	43.617	ENSACLG00000017161	-	90	43.511	Astatotilapia_calliptera
ENSGAGG00000022240	-	90	42.920	ENSACLG00000024091	-	85	42.920	Astatotilapia_calliptera
ENSGAGG00000022240	-	59	39.040	ENSACLG00000018181	-	99	39.040	Astatotilapia_calliptera
ENSGAGG00000022240	-	87	45.124	ENSACLG00000014619	-	92	45.124	Astatotilapia_calliptera
ENSGAGG00000022240	-	88	42.369	ENSACLG00000026879	-	91	42.369	Astatotilapia_calliptera
ENSGAGG00000022240	-	50	45.386	ENSACLG00000007343	-	97	45.386	Astatotilapia_calliptera
ENSGAGG00000022240	-	87	44.831	ENSACLG00000019876	-	91	45.124	Astatotilapia_calliptera
ENSGAGG00000022240	-	95	31.670	ENSACLG00000013572	-	92	31.670	Astatotilapia_calliptera
ENSGAGG00000022240	-	90	43.030	ENSACLG00000025719	-	85	43.030	Astatotilapia_calliptera
ENSGAGG00000022240	-	94	32.572	ENSACLG00000000499	-	91	32.593	Astatotilapia_calliptera
ENSGAGG00000022240	-	90	42.810	ENSACLG00000009628	-	85	42.810	Astatotilapia_calliptera
ENSGAGG00000022240	-	59	43.567	ENSACLG00000001563	-	66	43.567	Astatotilapia_calliptera
ENSGAGG00000022240	-	61	43.501	ENSACLG00000027730	-	85	43.501	Astatotilapia_calliptera
ENSGAGG00000022240	-	94	32.637	ENSACLG00000017808	-	91	32.658	Astatotilapia_calliptera
ENSGAGG00000022240	-	77	39.121	ENSACLG00000002180	-	78	39.121	Astatotilapia_calliptera
ENSGAGG00000022240	-	90	33.084	ENSACLG00000027291	-	87	33.151	Astatotilapia_calliptera
ENSGAGG00000022240	-	58	43.839	ENSAMXG00000030987	-	62	43.939	Astyanax_mexicanus
ENSGAGG00000022240	-	95	30.867	ENSAMXG00000040892	-	94	31.120	Astyanax_mexicanus
ENSGAGG00000022240	-	58	38.789	ENSAMXG00000038578	-	69	38.789	Astyanax_mexicanus
ENSGAGG00000022240	-	60	43.954	ENSAMXG00000038169	-	74	43.954	Astyanax_mexicanus
ENSGAGG00000022240	-	86	30.996	ENSAMXG00000030902	-	92	30.618	Astyanax_mexicanus
ENSGAGG00000022240	-	87	39.286	ENSAMXG00000031698	-	87	39.286	Astyanax_mexicanus
ENSGAGG00000022240	-	53	81.894	ENSCPBG00000011626	-	99	81.894	Chrysemys_picta_bellii
ENSGAGG00000022240	-	50	39.951	ENSCVAG00000009912	-	99	39.951	Cyprinodon_variegatus
ENSGAGG00000022240	-	59	39.208	ENSELUG00000000948	-	80	39.208	Esox_lucius
ENSGAGG00000022240	-	56	39.341	ENSFHEG00000000971	-	78	39.341	Fundulus_heteroclitus
ENSGAGG00000022240	-	54	45.498	ENSIPUG00000000601	-	93	45.379	Ictalurus_punctatus
ENSGAGG00000022240	-	62	35.658	ENSMAMG00000018393	-	93	35.658	Mastacembelus_armatus
ENSGAGG00000022240	-	59	42.495	ENSMZEG00005000633	-	88	42.495	Maylandia_zebra
ENSGAGG00000022240	-	78	44.173	ENSORLG00000027568	-	81	44.173	Oryzias_latipes
ENSGAGG00000022240	-	59	38.438	ENSORLG00000026676	-	98	38.438	Oryzias_latipes
ENSGAGG00000022240	-	90	32.329	ENSORLG00000029874	-	93	31.122	Oryzias_latipes
ENSGAGG00000022240	-	81	43.355	ENSORLG00000026546	-	84	43.355	Oryzias_latipes
ENSGAGG00000022240	-	94	31.728	ENSORLG00000029675	-	92	31.290	Oryzias_latipes
ENSGAGG00000022240	-	79	44.669	ENSORLG00000028795	-	88	44.669	Oryzias_latipes
ENSGAGG00000022240	-	81	43.682	ENSORLG00000026665	-	84	43.682	Oryzias_latipes
ENSGAGG00000022240	-	80	44.382	ENSORLG00000024904	-	85	44.382	Oryzias_latipes
ENSGAGG00000022240	-	91	35.734	ENSORLG00000030542	-	96	34.944	Oryzias_latipes
ENSGAGG00000022240	-	73	44.515	ENSORLG00000022369	-	94	34.124	Oryzias_latipes
ENSGAGG00000022240	-	95	31.286	ENSORLG00000026629	-	92	31.021	Oryzias_latipes
ENSGAGG00000022240	-	81	43.573	ENSORLG00000024233	-	84	43.573	Oryzias_latipes
ENSGAGG00000022240	-	91	35.665	ENSORLG00000028609	-	96	34.879	Oryzias_latipes
ENSGAGG00000022240	-	79	44.173	ENSORLG00000030265	-	81	44.173	Oryzias_latipes
ENSGAGG00000022240	-	57	39.348	ENSORLG00000028632	-	86	39.282	Oryzias_latipes
ENSGAGG00000022240	-	95	31.326	ENSORLG00000026873	-	92	31.061	Oryzias_latipes
ENSGAGG00000022240	-	79	44.284	ENSORLG00000025739	-	81	44.284	Oryzias_latipes
ENSGAGG00000022240	-	79	44.173	ENSORLG00000024220	-	82	44.173	Oryzias_latipes
ENSGAGG00000022240	-	95	31.262	ENSORLG00000023181	-	92	30.997	Oryzias_latipes
ENSGAGG00000022240	-	81	44.419	ENSORLG00000027831	-	89	44.419	Oryzias_latipes
ENSGAGG00000022240	-	82	43.246	ENSORLG00020014203	-	85	43.246	Oryzias_latipes_hni
ENSGAGG00000022240	-	82	43.246	ENSORLG00020003869	-	83	44.157	Oryzias_latipes_hni
ENSGAGG00000022240	-	79	44.284	ENSORLG00020008293	-	81	44.284	Oryzias_latipes_hni
ENSGAGG00000022240	-	81	45.333	ENSORLG00020001422	-	84	45.333	Oryzias_latipes_hni
ENSGAGG00000022240	-	81	42.968	ENSORLG00020020268	-	83	43.886	Oryzias_latipes_hni
ENSGAGG00000022240	-	91	35.802	ENSORLG00015017778	-	96	35.010	Oryzias_latipes_hsok
ENSGAGG00000022240	-	91	35.734	ENSORLG00015018878	-	96	34.944	Oryzias_latipes_hsok
ENSGAGG00000022240	-	95	31.762	ENSOMEG00000009987	-	95	31.698	Oryzias_melastigma
ENSGAGG00000022240	-	79	45.424	ENSOMEG00000003712	-	88	45.424	Oryzias_melastigma
ENSGAGG00000022240	-	87	43.609	ENSPSIG00000000489	-	95	43.609	Pelodiscus_sinensis
ENSGAGG00000022240	-	76	43.683	ENSPSIG00000000994	-	93	43.683	Pelodiscus_sinensis
ENSGAGG00000022240	-	60	42.664	ENSPSIG00000000353	-	82	42.664	Pelodiscus_sinensis
ENSGAGG00000022240	-	52	46.061	ENSPSIG00000001658	-	94	46.061	Pelodiscus_sinensis
ENSGAGG00000022240	-	79	42.636	ENSPSIG00000000767	-	91	42.621	Pelodiscus_sinensis
ENSGAGG00000022240	-	50	43.782	ENSPMEG00000019585	-	99	43.782	Poecilia_mexicana
ENSGAGG00000022240	-	80	36.643	ENSPMEG00000016355	-	92	37.731	Poecilia_mexicana
ENSGAGG00000022240	-	81	39.671	ENSPREG00000000390	-	89	39.671	Poecilia_reticulata
ENSGAGG00000022240	-	86	38.883	ENSPREG00000004954	-	95	31.548	Poecilia_reticulata
ENSGAGG00000022240	-	74	41.112	ENSSDUG00000002460	-	93	41.112	Seriola_dumerili
ENSGAGG00000022240	-	95	31.166	ENSXMAG00000023319	-	92	31.166	Xiphophorus_maculatus
ENSGAGG00000022240	-	81	40.356	ENSXMAG00000021213	-	85	40.356	Xiphophorus_maculatus
ENSGAGG00000022240	-	81	40.628	ENSXMAG00000026594	-	85	40.628	Xiphophorus_maculatus
ENSGAGG00000022240	-	75	44.334	ENSXMAG00000030100	-	85	44.089	Xiphophorus_maculatus
ENSGAGG00000022240	-	80	45.158	ENSXMAG00000026031	-	84	44.928	Xiphophorus_maculatus
ENSGAGG00000022240	-	81	37.388	ENSXMAG00000023503	-	81	37.388	Xiphophorus_maculatus
ENSGAGG00000022240	-	81	37.948	ENSXMAG00000023079	-	81	37.948	Xiphophorus_maculatus
ENSGAGG00000022240	-	95	31.063	ENSXMAG00000021298	-	92	31.103	Xiphophorus_maculatus
ENSGAGG00000022240	-	59	40.628	ENSXMAG00000030089	-	89	40.628	Xiphophorus_maculatus