EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAGG00000022242 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Plus strand
Length: 32179 bases
Position: chrPPEB01004127.1:820-32998
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000031041	IF-2	PF11987.8	8.1e-20	1	1
ENSGAGP00000031035	IF-2	PF11987.8	8.4e-20	1	1
ENSGAGP00000031029	IF-2	PF11987.8	8.9e-20	1	1
ENSGAGP00000031037	IF-2	PF11987.8	6.4e-13	1	1
ENSGAGP00000031041	GTP_EFTU	PF00009.27	1.3e-34	1	1
ENSGAGP00000031037	GTP_EFTU	PF00009.27	1.4e-34	1	1
ENSGAGP00000031035	GTP_EFTU	PF00009.27	1.5e-34	1	1
ENSGAGP00000031029	GTP_EFTU	PF00009.27	1.5e-34	1	1
ENSGAGP00000031037	MMR_HSR1	PF01926.23	2.8e-07	1	1
ENSGAGP00000031041	MMR_HSR1	PF01926.23	3e-07	1	1
ENSGAGP00000031035	MMR_HSR1	PF01926.23	3e-07	1	1
ENSGAGP00000031029	MMR_HSR1	PF01926.23	3.2e-07	1	1
ENSGAGP00000031037	GTP_EFTU_D2	PF03144.25	1.9e-11	1	1
ENSGAGP00000031029	GTP_EFTU_D2	PF03144.25	2.2e-11	1	1
ENSGAGP00000031035	GTP_EFTU_D2	PF03144.25	2.2e-11	1	1
ENSGAGP00000031041	GTP_EFTU_D2	PF03144.25	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000035188	-	1995	-	ENSGAGP00000031037	664 (aa)	-	-
ENSGAGT00000035178	-	2494	-	ENSGAGP00000031029	700 (aa)	-	-
ENSGAGT00000035193	-	1941	-	ENSGAGP00000031041	646 (aa)	-	-
ENSGAGT00000035186	-	2031	-	ENSGAGP00000031035	676 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000022242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000022242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000022242	-	92	87.138	ENSAPOG00000004375	eif5b	52	87.138	Acanthochromis_polyacanthus
ENSGAGG00000022242	-	92	87.299	ENSACIG00000024324	eif5b	62	87.299	Amphilophus_citrinellus
ENSGAGG00000022242	-	92	87.621	ENSAOCG00000018386	eif5b	52	87.621	Amphiprion_ocellaris
ENSGAGG00000022242	-	52	86.932	ENSAPEG00000008631	eif5b	100	86.932	Amphiprion_percula
ENSGAGG00000022242	-	92	86.495	ENSATEG00000011451	-	67	83.005	Anabas_testudineus
ENSGAGG00000022242	-	92	88.103	ENSATEG00000011259	eif5b	66	85.366	Anabas_testudineus
ENSGAGG00000022242	-	92	88.103	ENSATEG00000006765	eif5b	53	85.366	Anabas_testudineus
ENSGAGG00000022242	-	98	94.260	ENSACAG00000008305	-	55	94.234	Anolis_carolinensis
ENSGAGG00000022242	-	99	81.753	ENSACLG00000005530	eif5b	67	84.650	Astatotilapia_calliptera
ENSGAGG00000022242	-	92	89.068	ENSAMXG00000018383	eif5b	55	85.584	Astyanax_mexicanus
ENSGAGG00000022242	-	91	57.236	WBGene00021857	iffb-1	57	57.516	Caenorhabditis_elegans
ENSGAGG00000022242	-	94	86.321	ENSCJAG00000009960	-	51	87.480	Callithrix_jacchus
ENSGAGG00000022242	-	99	88.024	ENSCAPG00000014619	-	54	88.415	Cavia_aperea
ENSGAGG00000022242	-	99	93.114	ENSCPOG00000011967	-	54	93.598	Cavia_porcellus
ENSGAGG00000022242	-	87	76.678	ENSCHOG00000002137	-	54	76.678	Choloepus_hoffmanni
ENSGAGG00000022242	-	91	65.747	ENSCSAVG00000008808	-	66	65.747	Ciona_savignyi
ENSGAGG00000022242	-	92	88.746	ENSCSEG00000014153	eif5b	51	88.746	Cynoglossus_semilaevis
ENSGAGG00000022242	-	92	87.621	ENSCVAG00000019619	eif5b	52	87.621	Cyprinodon_variegatus
ENSGAGG00000022242	-	91	70.473	FBgn0026259	eIF5B	54	70.473	Drosophila_melanogaster
ENSGAGG00000022242	-	96	85.208	ENSELUG00000001132	eif5b	61	84.709	Esox_lucius
ENSGAGG00000022242	-	88	96.760	ENSFALG00000003920	-	53	96.760	Ficedula_albicollis
ENSGAGG00000022242	-	92	84.084	ENSGMOG00000002031	eif5b	54	84.084	Gadus_morhua
ENSGAGG00000022242	-	92	85.185	ENSGACG00000010536	eif5b	85	85.185	Gasterosteus_aculeatus
ENSGAGG00000022242	-	92	87.621	ENSHBUG00000023319	eif5b	55	84.650	Haplochromis_burtoni
ENSGAGG00000022242	-	92	87.460	ENSHCOG00000002807	eif5b	52	87.460	Hippocampus_comes
ENSGAGG00000022242	-	92	89.068	ENSIPUG00000020910	eif5b	53	89.068	Ictalurus_punctatus
ENSGAGG00000022242	-	92	87.942	ENSKMAG00000004325	eif5b	52	87.942	Kryptolebias_marmoratus
ENSGAGG00000022242	-	92	85.280	ENSLBEG00000027090	eif5b	63	82.335	Labrus_bergylta
ENSGAGG00000022242	-	92	89.474	ENSLACG00000011688	eif5b	55	87.218	Latimeria_chalumnae
ENSGAGG00000022242	-	92	87.138	ENSMAMG00000022568	eif5b	51	87.138	Mastacembelus_armatus
ENSGAGG00000022242	-	92	87.621	ENSMZEG00005012696	eif5b	55	84.650	Maylandia_zebra
ENSGAGG00000022242	-	97	94.082	ENSMODG00000001387	-	55	94.082	Monodelphis_domestica
ENSGAGG00000022242	-	92	86.334	ENSMALG00000005862	eif5b	52	86.334	Monopterus_albus
ENSGAGG00000022242	-	92	86.817	ENSNBRG00000021912	eif5b	61	83.891	Neolamprologus_brichardi
ENSGAGG00000022242	-	92	86.977	ENSONIG00000018749	eif5b	55	84.043	Oreochromis_niloticus
ENSGAGG00000022242	-	99	92.889	ENSOANG00000004621	-	55	94.207	Ornithorhynchus_anatinus
ENSGAGG00000022242	-	97	94.082	ENSOCUG00000021154	-	54	94.207	Oryctolagus_cuniculus
ENSGAGG00000022242	-	92	87.781	ENSORLG00000001525	eif5b	52	87.781	Oryzias_latipes
ENSGAGG00000022242	-	92	87.781	ENSORLG00020005327	eif5b	53	87.781	Oryzias_latipes_hni
ENSGAGG00000022242	-	92	87.621	ENSORLG00015008949	eif5b	53	87.621	Oryzias_latipes_hsok
ENSGAGG00000022242	-	92	87.460	ENSOMEG00000016539	eif5b	79	87.460	Oryzias_melastigma
ENSGAGG00000022242	-	92	88.264	ENSPKIG00000011133	eif5b	54	85.455	Paramormyrops_kingsleyae
ENSGAGG00000022242	-	73	95.949	ENSPSIG00000014914	-	68	94.737	Pelodiscus_sinensis
ENSGAGG00000022242	-	92	74.759	ENSPMAG00000004508	eif5b	52	74.759	Petromyzon_marinus
ENSGAGG00000022242	-	92	87.781	ENSPFOG00000007543	eif5b	90	87.478	Poecilia_formosa
ENSGAGG00000022242	-	92	87.781	ENSPLAG00000015913	eif5b	55	84.802	Poecilia_latipinna
ENSGAGG00000022242	-	92	87.781	ENSPMEG00000006712	eif5b	55	84.802	Poecilia_mexicana
ENSGAGG00000022242	-	98	86.747	ENSPCAG00000007829	-	54	87.195	Procavia_capensis
ENSGAGG00000022242	-	97	88.351	ENSPCOG00000019508	-	100	97.106	Propithecus_coquereli
ENSGAGG00000022242	-	92	87.460	ENSPNYG00000021051	eif5b	67	84.498	Pundamilia_nyererei
ENSGAGG00000022242	-	92	89.711	ENSPNAG00000023852	eif5b	51	89.711	Pygocentrus_nattereri
ENSGAGG00000022242	-	88	50.825	YAL035W	FUN12	60	50.825	Saccharomyces_cerevisiae
ENSGAGG00000022242	-	96	86.329	ENSSFOG00015000594	eif5b	53	85.823	Scleropages_formosus
ENSGAGG00000022242	-	92	85.209	ENSSMAG00000000045	eif5b	61	85.209	Scophthalmus_maximus
ENSGAGG00000022242	-	92	87.138	ENSSDUG00000005847	eif5b	65	84.451	Seriola_dumerili
ENSGAGG00000022242	-	92	87.299	ENSSLDG00000013738	eif5b	66	84.451	Seriola_lalandi_dorsalis
ENSGAGG00000022242	-	92	82.476	ENSSPAG00000005335	eif5b	61	82.476	Stegastes_partitus
ENSGAGG00000022242	-	92	86.334	ENSTRUG00000007772	eif5b	63	85.179	Takifugu_rubripes
ENSGAGG00000022242	-	92	86.656	ENSTNIG00000006580	eif5b	69	86.656	Tetraodon_nigroviridis
ENSGAGG00000022242	-	99	90.030	ENSXETG00000019377	eif5b	56	90.772	Xenopus_tropicalis
ENSGAGG00000022242	-	92	86.560	ENSXCOG00000016681	eif5b	70	86.560	Xiphophorus_couchianus
ENSGAGG00000022242	-	92	86.677	ENSXMAG00000001002	eif5b	70	86.677	Xiphophorus_maculatus