EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAGG00000022371 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gopherus_agassizii
Status: putative
Strand: Minus strand
Length: 143042 bases
Position: chrPPEB01000746.1:135238-278279
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAGP00000031138	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAGT00000035310	-	1001	-	ENSGAGP00000031139	190 (aa)	-	-
ENSGAGT00000035309	-	1055	-	ENSGAGP00000031138	208 (aa)	-	-

Gene Model

Click here to download ENSGAGG00000022371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAGG00000022371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAGG00000022371	-	95	34.434	ENSGAGG00000025340	RAB36	79	34.434
ENSGAGG00000022371	-	77	34.783	ENSGAGG00000014814	RAB11A	75	34.783
ENSGAGG00000022371	-	93	38.308	ENSGAGG00000006802	RAB1A	94	38.308
ENSGAGG00000022371	-	76	40.252	ENSGAGG00000007278	RAB12	65	40.252
ENSGAGG00000022371	-	80	40.351	ENSGAGG00000015642	-	83	40.351
ENSGAGG00000022371	-	77	42.236	ENSGAGG00000004474	RAB30	79	42.236
ENSGAGG00000022371	-	100	90.865	ENSGAGG00000021701	RAB6A	100	90.865
ENSGAGG00000022371	-	73	33.962	ENSGAGG00000015067	RASL11A	67	33.962
ENSGAGG00000022371	-	76	41.615	ENSGAGG00000012473	RAB34	69	41.615
ENSGAGG00000022371	-	89	38.743	ENSGAGG00000004918	-	91	38.743
ENSGAGG00000022371	-	70	39.726	ENSGAGG00000012709	RAB23	66	39.873
ENSGAGG00000022371	-	95	34.466	ENSGAGG00000009488	RAB33A	90	34.466
ENSGAGG00000022371	-	76	43.038	ENSGAGG00000000742	-	95	38.974
ENSGAGG00000022371	-	99	34.742	ENSGAGG00000002936	RAB33B	93	34.742
ENSGAGG00000022371	-	61	35.938	ENSGAGG00000016932	-	87	35.938
ENSGAGG00000022371	-	78	39.024	ENSGAGG00000004921	RAB42	80	39.024
ENSGAGG00000022371	-	100	31.336	ENSGAGG00000025053	RRAS2	99	31.336
ENSGAGG00000022371	-	92	35.859	ENSGAGG00000023041	RAB2B	89	35.859
ENSGAGG00000022371	-	75	32.911	ENSGAGG00000011790	-	84	32.911
ENSGAGG00000022371	-	89	34.225	ENSGAGG00000013139	RAB19	85	34.225
ENSGAGG00000022371	-	74	38.961	ENSGAGG00000017207	RAB35	76	38.961
ENSGAGG00000022371	-	93	35.859	ENSGAGG00000023956	RAB1B	96	35.859
ENSGAGG00000022371	-	87	32.447	ENSGAGG00000012314	RAB9B	96	32.178
ENSGAGG00000022371	-	86	39.326	ENSGAGG00000005606	RAB2A	81	39.326
ENSGAGG00000022371	-	75	32.911	ENSGAGG00000017673	NRAS	83	32.911
ENSGAGG00000022371	-	75	32.278	ENSGAGG00000011057	KRAS	83	32.278
ENSGAGG00000022371	-	94	35.437	ENSGAGG00000004988	RAB14	95	35.437
ENSGAGG00000022371	-	82	33.714	ENSGAGG00000021838	RERG	86	33.714
ENSGAGG00000022371	-	76	33.125	ENSGAGG00000020094	MRAS	85	31.461
ENSGAGG00000022371	-	92	31.500	ENSGAGG00000012557	-	89	31.500
ENSGAGG00000022371	-	95	34.135	ENSGAGG00000008447	RAB39B	98	34.135
ENSGAGG00000022371	-	77	34.783	ENSGAGG00000020702	-	75	34.783
ENSGAGG00000022371	-	75	38.854	ENSGAGG00000020703	RAB25	74	38.854
ENSGAGG00000022371	-	98	42.233	ENSGAGG00000005319	RAB5A	95	42.233
ENSGAGG00000022371	-	75	35.119	ENSGAGG00000017981	RAB9A	82	35.119
ENSGAGG00000022371	-	58	34.127	ENSGAGG00000020394	RAB7B	78	34.127
ENSGAGG00000022371	-	75	31.646	ENSGAGG00000019886	-	83	31.646
ENSGAGG00000022371	-	86	36.517	ENSGAGG00000018569	RAB22A	92	36.517
ENSGAGG00000022371	-	94	37.000	ENSGAGG00000012234	RAB7A	96	37.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAGG00000022371	-	100	98.558	ENSG00000154917	RAB6B	100	100.000	Homo_sapiens
ENSGAGG00000022371	-	100	88.942	ENSAPOG00000016512	-	100	88.942	Acanthochromis_polyacanthus
ENSGAGG00000022371	-	100	94.712	ENSAPOG00000019100	rab6ba	100	94.712	Acanthochromis_polyacanthus
ENSGAGG00000022371	-	100	90.385	ENSAPOG00000014397	rab6bb	100	90.385	Acanthochromis_polyacanthus
ENSGAGG00000022371	-	100	98.558	ENSAMEG00000000252	RAB6B	100	98.558	Ailuropoda_melanoleuca
ENSGAGG00000022371	-	96	92.000	ENSACIG00000007154	rab6ba	93	92.000	Amphilophus_citrinellus
ENSGAGG00000022371	-	100	84.615	ENSACIG00000014094	rab6bb	100	84.615	Amphilophus_citrinellus
ENSGAGG00000022371	-	100	94.712	ENSAOCG00000002298	rab6ba	100	94.712	Amphiprion_ocellaris
ENSGAGG00000022371	-	100	90.385	ENSAOCG00000011103	rab6bb	100	90.385	Amphiprion_ocellaris
ENSGAGG00000022371	-	91	95.767	ENSAPEG00000020892	rab6ba	99	95.767	Amphiprion_percula
ENSGAGG00000022371	-	100	90.385	ENSAPEG00000007731	rab6bb	100	90.385	Amphiprion_percula
ENSGAGG00000022371	-	100	89.423	ENSAPEG00000005857	-	100	89.423	Amphiprion_percula
ENSGAGG00000022371	-	100	82.938	ENSATEG00000011879	rab6bb	100	82.938	Anabas_testudineus
ENSGAGG00000022371	-	100	98.558	ENSANAG00000017472	RAB6B	100	98.558	Aotus_nancymaae
ENSGAGG00000022371	-	100	90.385	ENSACLG00000026487	rab6bb	100	90.385	Astatotilapia_calliptera
ENSGAGG00000022371	-	100	95.192	ENSACLG00000025138	rab6ba	100	95.192	Astatotilapia_calliptera
ENSGAGG00000022371	-	100	90.385	ENSAMXG00000004630	rab6ba	100	90.385	Astyanax_mexicanus
ENSGAGG00000022371	-	100	99.038	ENSBTAG00000000905	RAB6B	100	99.038	Bos_taurus
ENSGAGG00000022371	-	98	79.310	WBGene00004270	rab-6.2	99	79.310	Caenorhabditis_elegans
ENSGAGG00000022371	-	100	98.558	ENSCAFG00020027569	RAB6B	100	98.558	Canis_lupus_dingo
ENSGAGG00000022371	-	100	98.558	ENSCHIG00000016452	RAB6B	100	98.558	Capra_hircus
ENSGAGG00000022371	-	100	98.558	ENSCPOG00000038813	RAB6B	100	98.558	Cavia_porcellus
ENSGAGG00000022371	-	100	98.558	ENSCCAG00000035269	RAB6B	100	98.558	Cebus_capucinus
ENSGAGG00000022371	-	100	98.558	ENSCATG00000041263	RAB6B	100	98.558	Cercocebus_atys
ENSGAGG00000022371	-	100	98.558	ENSCSAG00000010704	RAB6B	100	98.558	Chlorocebus_sabaeus
ENSGAGG00000022371	-	100	99.519	ENSCPBG00000021406	RAB6B	100	99.519	Chrysemys_picta_bellii
ENSGAGG00000022371	-	100	98.558	ENSCANG00000029838	RAB6B	100	98.558	Colobus_angolensis_palliatus
ENSGAGG00000022371	-	100	98.558	ENSCGRG00001013041	Rab6b	100	98.558	Cricetulus_griseus_chok1gshd
ENSGAGG00000022371	-	100	90.865	ENSCSEG00000003122	rab6ba	100	90.865	Cynoglossus_semilaevis
ENSGAGG00000022371	-	100	90.385	ENSCSEG00000016556	rab6bb	100	90.385	Cynoglossus_semilaevis
ENSGAGG00000022371	-	100	89.423	ENSCVAG00000004751	rab6bb	100	89.423	Cyprinodon_variegatus
ENSGAGG00000022371	-	100	93.269	ENSCVAG00000012889	rab6ba	100	93.269	Cyprinodon_variegatus
ENSGAGG00000022371	-	100	90.865	ENSDARG00000031343	rab6bb	100	90.865	Danio_rerio
ENSGAGG00000022371	-	100	95.192	ENSDARG00000034522	rab6ba	100	95.192	Danio_rerio
ENSGAGG00000022371	-	100	98.558	ENSDORG00000026441	Rab6b	100	98.558	Dipodomys_ordii
ENSGAGG00000022371	-	100	88.942	ENSEBUG00000000963	-	100	88.942	Eptatretus_burgeri
ENSGAGG00000022371	-	100	90.385	ENSELUG00000022470	rab6bb	100	90.385	Esox_lucius
ENSGAGG00000022371	-	100	95.192	ENSELUG00000001257	rab6ba	100	95.192	Esox_lucius
ENSGAGG00000022371	-	100	98.558	ENSFCAG00000040897	RAB6B	100	98.558	Felis_catus
ENSGAGG00000022371	-	100	98.558	ENSFDAG00000005525	RAB6B	100	98.558	Fukomys_damarensis
ENSGAGG00000022371	-	91	89.947	ENSFHEG00000001477	-	75	89.947	Fundulus_heteroclitus
ENSGAGG00000022371	-	100	90.385	ENSFHEG00000022524	rab6bb	100	90.385	Fundulus_heteroclitus
ENSGAGG00000022371	-	100	90.385	ENSGAFG00000010916	rab6bb	100	90.385	Gambusia_affinis
ENSGAGG00000022371	-	100	94.231	ENSGAFG00000017270	rab6ba	100	94.231	Gambusia_affinis
ENSGAGG00000022371	-	100	89.302	ENSGACG00000003726	rab6ba	100	89.302	Gasterosteus_aculeatus
ENSGAGG00000022371	-	100	88.462	ENSGACG00000013721	rab6bb	100	88.462	Gasterosteus_aculeatus
ENSGAGG00000022371	-	100	98.558	ENSGGOG00000028342	RAB6B	100	98.558	Gorilla_gorilla
ENSGAGG00000022371	-	100	95.192	ENSHBUG00000012905	rab6ba	100	95.192	Haplochromis_burtoni
ENSGAGG00000022371	-	100	83.654	ENSHBUG00000003230	rab6bb	100	83.654	Haplochromis_burtoni
ENSGAGG00000022371	-	100	98.558	ENSHGLG00000016898	RAB6B	100	98.558	Heterocephalus_glaber_female
ENSGAGG00000022371	-	100	98.558	ENSHGLG00100016679	RAB6B	100	98.558	Heterocephalus_glaber_male
ENSGAGG00000022371	-	100	89.904	ENSHCOG00000013130	rab6bb	100	89.904	Hippocampus_comes
ENSGAGG00000022371	-	100	91.827	ENSHCOG00000014711	rab6ba	100	91.827	Hippocampus_comes
ENSGAGG00000022371	-	100	94.712	ENSIPUG00000015058	rab6b	100	94.712	Ictalurus_punctatus
ENSGAGG00000022371	-	100	88.942	ENSIPUG00000018098	rab6b	100	88.942	Ictalurus_punctatus
ENSGAGG00000022371	-	100	98.558	ENSSTOG00000014123	RAB6B	100	98.558	Ictidomys_tridecemlineatus
ENSGAGG00000022371	-	100	89.904	ENSKMAG00000011278	rab6bb	100	89.904	Kryptolebias_marmoratus
ENSGAGG00000022371	-	99	89.372	ENSKMAG00000002545	-	98	89.372	Kryptolebias_marmoratus
ENSGAGG00000022371	-	100	94.231	ENSKMAG00000015507	rab6ba	100	94.231	Kryptolebias_marmoratus
ENSGAGG00000022371	-	100	94.231	ENSLBEG00000026930	rab6ba	100	94.231	Labrus_bergylta
ENSGAGG00000022371	-	100	89.904	ENSLBEG00000019372	rab6bb	100	89.904	Labrus_bergylta
ENSGAGG00000022371	-	91	98.413	ENSLAFG00000009905	RAB6B	100	98.413	Loxodonta_africana
ENSGAGG00000022371	-	100	98.558	ENSMFAG00000032149	RAB6B	100	98.558	Macaca_fascicularis
ENSGAGG00000022371	-	100	98.558	ENSMMUG00000008919	RAB6B	100	98.558	Macaca_mulatta
ENSGAGG00000022371	-	100	98.558	ENSMNEG00000037540	RAB6B	100	98.558	Macaca_nemestrina
ENSGAGG00000022371	-	100	94.712	ENSMAMG00000009672	rab6ba	100	94.712	Mastacembelus_armatus
ENSGAGG00000022371	-	100	90.385	ENSMAMG00000012233	rab6bb	100	90.385	Mastacembelus_armatus
ENSGAGG00000022371	-	100	95.192	ENSMZEG00005008991	rab6ba	100	95.192	Maylandia_zebra
ENSGAGG00000022371	-	100	90.385	ENSMZEG00005025464	rab6bb	100	90.385	Maylandia_zebra
ENSGAGG00000022371	-	99	89.372	ENSMZEG00005005866	-	98	89.372	Maylandia_zebra
ENSGAGG00000022371	-	100	98.558	ENSMICG00000049590	RAB6B	100	98.558	Microcebus_murinus
ENSGAGG00000022371	-	100	98.558	ENSMOCG00000001455	Rab6b	100	98.558	Microtus_ochrogaster
ENSGAGG00000022371	-	100	91.346	ENSMMOG00000006947	rab6ba	100	91.346	Mola_mola
ENSGAGG00000022371	-	100	89.904	ENSMMOG00000018976	rab6bb	100	89.904	Mola_mola
ENSGAGG00000022371	-	100	98.558	ENSMODG00000018494	RAB6B	100	98.558	Monodelphis_domestica
ENSGAGG00000022371	-	100	89.904	ENSMALG00000017417	rab6bb	100	89.904	Monopterus_albus
ENSGAGG00000022371	-	100	93.269	ENSMALG00000015854	rab6ba	100	93.269	Monopterus_albus
ENSGAGG00000022371	-	100	98.558	MGP_CAROLIEiJ_G0032585	Rab6b	100	98.558	Mus_caroli
ENSGAGG00000022371	-	100	98.558	ENSMUSG00000032549	Rab6b	100	98.558	Mus_musculus
ENSGAGG00000022371	-	100	98.558	MGP_PahariEiJ_G0015453	Rab6b	100	98.558	Mus_pahari
ENSGAGG00000022371	-	100	98.558	MGP_SPRETEiJ_G0033730	Rab6b	100	98.558	Mus_spretus
ENSGAGG00000022371	-	100	98.558	ENSNGAG00000020441	Rab6b	100	98.558	Nannospalax_galili
ENSGAGG00000022371	-	100	83.654	ENSNBRG00000015905	rab6bb	100	83.654	Neolamprologus_brichardi
ENSGAGG00000022371	-	100	95.192	ENSNBRG00000013673	rab6ba	100	95.192	Neolamprologus_brichardi
ENSGAGG00000022371	-	100	91.346	ENSNLEG00000003675	RAB6B	100	91.346	Nomascus_leucogenys
ENSGAGG00000022371	-	100	98.558	ENSOPRG00000001164	RAB6B	100	98.558	Ochotona_princeps
ENSGAGG00000022371	-	100	90.385	ENSONIG00000009886	rab6bb	100	90.385	Oreochromis_niloticus
ENSGAGG00000022371	-	100	99.038	ENSOCUG00000009428	RAB6B	100	99.038	Oryctolagus_cuniculus
ENSGAGG00000022371	-	100	90.385	ENSORLG00000016290	rab6bb	100	90.385	Oryzias_latipes
ENSGAGG00000022371	-	100	90.385	ENSORLG00020013337	rab6bb	100	90.385	Oryzias_latipes_hni
ENSGAGG00000022371	-	100	90.698	ENSORLG00020010772	rab6ba	100	90.698	Oryzias_latipes_hni
ENSGAGG00000022371	-	100	90.385	ENSORLG00015013537	rab6bb	100	90.385	Oryzias_latipes_hsok
ENSGAGG00000022371	-	100	93.750	ENSORLG00015006970	rab6ba	100	93.750	Oryzias_latipes_hsok
ENSGAGG00000022371	-	100	93.750	ENSOMEG00000014206	rab6ba	100	93.750	Oryzias_melastigma
ENSGAGG00000022371	-	100	90.385	ENSOMEG00000023625	rab6bb	100	90.385	Oryzias_melastigma
ENSGAGG00000022371	-	100	98.558	ENSOGAG00000005245	RAB6B	100	98.558	Otolemur_garnettii
ENSGAGG00000022371	-	100	98.558	ENSPPAG00000042439	RAB6B	100	98.558	Pan_paniscus
ENSGAGG00000022371	-	100	98.558	ENSPPRG00000023437	RAB6B	100	98.558	Panthera_pardus
ENSGAGG00000022371	-	100	98.558	ENSPTRG00000048374	RAB6B	100	98.558	Pan_troglodytes
ENSGAGG00000022371	-	100	98.558	ENSPANG00000009221	RAB6B	100	98.558	Papio_anubis
ENSGAGG00000022371	-	100	93.750	ENSPKIG00000003261	-	100	93.750	Paramormyrops_kingsleyae
ENSGAGG00000022371	-	100	87.981	ENSPKIG00000024232	-	100	87.981	Paramormyrops_kingsleyae
ENSGAGG00000022371	-	100	83.173	ENSPMGG00000015233	rab6bb	100	83.173	Periophthalmus_magnuspinnatus
ENSGAGG00000022371	-	100	98.558	ENSPCIG00000010292	-	100	98.558	Phascolarctos_cinereus
ENSGAGG00000022371	-	100	94.231	ENSPFOG00000003742	rab6ba	100	94.231	Poecilia_formosa
ENSGAGG00000022371	-	100	90.385	ENSPLAG00000019707	rab6bb	100	90.385	Poecilia_latipinna
ENSGAGG00000022371	-	100	94.231	ENSPLAG00000022260	rab6ba	100	94.231	Poecilia_latipinna
ENSGAGG00000022371	-	100	94.231	ENSPMEG00000019167	rab6ba	100	94.231	Poecilia_mexicana
ENSGAGG00000022371	-	100	90.385	ENSPMEG00000021872	rab6bb	100	90.385	Poecilia_mexicana
ENSGAGG00000022371	-	100	88.995	ENSPREG00000015480	rab6ba	93	96.257	Poecilia_reticulata
ENSGAGG00000022371	-	100	98.558	ENSPPYG00000014116	RAB6B	100	98.558	Pongo_abelii
ENSGAGG00000022371	-	100	98.077	ENSPCAG00000013887	RAB6B	100	98.077	Procavia_capensis
ENSGAGG00000022371	-	100	98.558	ENSPCOG00000018146	RAB6B	100	98.558	Propithecus_coquereli
ENSGAGG00000022371	-	100	95.192	ENSPNYG00000019963	rab6ba	100	95.192	Pundamilia_nyererei
ENSGAGG00000022371	-	100	83.654	ENSPNYG00000010861	rab6bb	100	83.654	Pundamilia_nyererei
ENSGAGG00000022371	-	100	88.942	ENSPNAG00000005519	-	100	88.942	Pygocentrus_nattereri
ENSGAGG00000022371	-	100	94.712	ENSPNAG00000028379	rab6ba	100	94.712	Pygocentrus_nattereri
ENSGAGG00000022371	-	100	91.827	ENSPNAG00000010157	rab6bb	100	91.827	Pygocentrus_nattereri
ENSGAGG00000022371	-	100	98.558	ENSRNOG00000009198	Rab6b	100	98.558	Rattus_norvegicus
ENSGAGG00000022371	-	100	98.558	ENSRBIG00000031164	RAB6B	100	98.558	Rhinopithecus_bieti
ENSGAGG00000022371	-	100	98.558	ENSRROG00000030454	RAB6B	100	98.558	Rhinopithecus_roxellana
ENSGAGG00000022371	-	100	98.558	ENSSBOG00000032178	RAB6B	100	98.558	Saimiri_boliviensis_boliviensis
ENSGAGG00000022371	-	100	93.750	ENSSFOG00015019202	RAB6B	100	93.750	Scleropages_formosus
ENSGAGG00000022371	-	100	90.385	ENSSMAG00000000335	rab6bb	100	90.385	Scophthalmus_maximus
ENSGAGG00000022371	-	99	87.923	ENSSDUG00000018970	RAB6B	98	87.923	Seriola_dumerili
ENSGAGG00000022371	-	100	90.385	ENSSDUG00000009251	rab6bb	100	90.385	Seriola_dumerili
ENSGAGG00000022371	-	100	94.712	ENSSDUG00000021882	rab6ba	100	94.712	Seriola_dumerili
ENSGAGG00000022371	-	100	94.712	ENSSLDG00000003264	rab6ba	100	94.712	Seriola_lalandi_dorsalis
ENSGAGG00000022371	-	100	90.385	ENSSLDG00000012474	rab6bb	100	90.385	Seriola_lalandi_dorsalis
ENSGAGG00000022371	-	100	90.385	ENSSPAG00000009276	rab6bb	100	90.385	Stegastes_partitus
ENSGAGG00000022371	-	100	94.712	ENSSPAG00000017366	rab6ba	100	94.712	Stegastes_partitus
ENSGAGG00000022371	-	100	98.558	ENSSSCG00000036503	RAB6B	100	98.558	Sus_scrofa
ENSGAGG00000022371	-	100	90.865	ENSTRUG00000004881	rab6bb	100	90.865	Takifugu_rubripes
ENSGAGG00000022371	-	100	90.865	ENSTNIG00000015257	rab6bb	100	90.865	Tetraodon_nigroviridis
ENSGAGG00000022371	-	100	98.558	ENSVVUG00000005711	RAB6B	100	98.558	Vulpes_vulpes
ENSGAGG00000022371	-	100	90.385	ENSXCOG00000002232	rab6bb	100	90.385	Xiphophorus_couchianus
ENSGAGG00000022371	-	100	90.385	ENSXMAG00000015903	rab6bb	100	90.385	Xiphophorus_maculatus
ENSGAGG00000022371	-	100	94.231	ENSXMAG00000016638	rab6ba	100	94.231	Xiphophorus_maculatus